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Aliases & Descriptions for G6PC2
(According to
1 HGNC ,
2 Entrez Gene ,
3 UniProtKB/Swiss-Prot ,
4 UniProtKB/TrEMBL , 5 OMIM , 6 GeneLoc
, and/or 7 Ensembl ,
8 miRBase )About This Section
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Aliases EC 3.1.3.9 3 IGRP 1 , 2 , 3 , 5 MGC141936 2
Descriptions G-6-Pase 2 3 G6Pase 2 3 Islet-specific glucose-6-phosphatase catalytic subunit-related protein 2 , 3 glucose-6-phosphatase, catalytic, 2 2 islet-specific G6CP-related protein 2 islet-specific glucose-6-phosphatase-related protein 2
Search outside databases for aliases for G6PC2 genePrevious GC identifers: GC02P169961 GC02P169583
Summaries for G6PC2 (According to Entrez Gene ,
Wikipedia's
Gene Wiki ,
UniProtKB/Swiss-Prot ,
and/or
UniProtKB/TrEMBL )
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EntrezGene summary for G6PC2 : This gene encodes an enzyme belonging to the glucose-6-phosphatase catalytic subunit family. Theseenzymes are part of a multicomponent integral membrane system that catalyzes the hydrolysis ofglucose-6-phosphate, the terminal step in gluconeogenic and glycogenolytic pathways, allowing therelease of glucose into the bloodstream. The family member encoded by this gene is found inpancreatic islets and does not exhibit phosphohydrolase activity, but it is a major target ofcell-mediated autoimmunity in diabetes. Several alternatively spliced transcript variants of thisgene have been described, but their biological validity has not been determined. [provided byRefSeq] UniProtKB/Swiss-Prot: G6PC2_HUMAN, Q9NQR9 Function : May hydrolyze glucose-6-phosphate to glucose in the endoplasmic reticulum. May beresponsible for glucose production through glycogenolysis and gluconeogenesis (By similarity)
Gene Wiki entry for G6PC2
Genomic Location for G6PC2
(According to
GeneLoc and/or
HGNC , and/or
Entrez Gene (NCBI build 36) ,
and/or miRBase ,
Genomic Views according to
UCSC and
Ensembl ,
Transcription factor binding sites according to
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Genomic View : UCSC Golden Path with GeneCards custom track Transcription factor binding sites upstream to the G6PC2 gene Entrez Gene cytogenetic band: 2q24.3 Ensembl cytogenetic band: 2q24.3 HGNC cytogenetic band: 2q24-q31 G6PC2 Gene in genomic location: bands according to Ensembl, locations according to
(and/or Entrez Gene and/or Ensembl if different) GeneLoc gene densities for chromosome 2 GeneLoc Exon Structure
GeneLoc location for GC02P169466:
(about GC identifiers )
Start:
169,465,996 bp from pter
End:
169,474,756 bp from pter
Size:
8,761 bases
Orientation:
plus strand
RefSeq DNA sequence: NC_000002.10 NT_005403.16 Proteins for G6PC2
(According to
1 UniProtKB ,
and/or Ensembl ,
Phosphorylation sites according to 2 Phosphosite ,
RefSeq according to NCBI ,
PDB rendering according to OCA and/or Proteopedia ,
Recombinant Proteins
from Invitrogen ,
Millipore ,
Sigma-Aldrich ,
R&D Systems ,
Enzo Life Sciences ,
Abnova ,
OriGene and/or,
Abcam ,
Biochemical Assays by
Invitrogen ,
Millipore ,
R&D Systems ,
Cell Signaling Technology , and/or
Enzo Life Sciences ,
Ontologies according to Gene
Ontology Consortium 01 Apr 2009 and
Entrez Gene ,
Antibodies by Invitrogen ,
Millipore ,
Sigma-Aldrich ,
R&D Systems ,
Cell Signaling Technology ,
Abcam ,
Abnova , and/or
Novus Biologicals )
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UniProtKB/Swiss-Prot: G6PC2_HUMAN, Q9NQR9 (See
protein sequence )Recommended Name: Glucose-6-phosphatase 2 Size : 355 amino acids; 40580 Da
Subcellular location : Endoplasmic reticulum membrane; Multi-pass membrane protein
Secondary accessions : Q6AHZ0Alternative splicing : 2 isoforms : Q9NQR9-1 Q9NQR9-2
Post-translational modifications:
N-glycosylated; the non-glycosylated form is more unstable and is degraded through the proteasome1
REFSEQ proteins (2 alternative transcripts):
NP_001075155.1 NP_066999.1 ENSEMBL proteins: ENSP00000364512 ENSP00000282075 Human Recombinant Proteins Browse Origene for full length recombinant human proteins expressed in human HEK293 cells 4 Gene Ontology (GO) cellular component terms (links to tree view) :
About this table Antibodies for G6PC2: Assays for G6PC2:
Protein
Domains/ Families for G6PC2(According to InterPro , ProtoNet ,
UniProtKB , and/or BLOCKS ,
Sets of similar genes according to GeneDecks )
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Graphical View of Domain Structure for InterPro Entry Q9NQR9 ProtoNet protein and cluster: Q9NQR9
1 Blocks protein family : IPB000326 PA-phosphatase related phosphoesterase UniProtKB/Swiss-Prot: G6PC2_HUMAN, Q9NQR9 Similarity : Belongs to the glucose-6-phosphatase family
Gene Function for G6PC2
(According to MGI Jun 06 2009, UniProtKB ,
IUBMB ,and/or Genatlas ,
shRNA from
OriGene ,
Sigma-Aldrich , RNAi from
Sigma-Aldrich ,
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Clones , and
Q-PCR Products
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Millipore ,
OriGene , and/or
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siRNAs from
Applied Biosystems ,
SYBR primers from OriGene ,
Cell-based Assays from Millipore ,
Ontologies according to Gene Ontology Consortium 01 Apr 2009 via
Entrez Gene .)
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               OriGene 29mer shRNA kit in GFP-retroviral vectors (see all 2 ): NM_001081686 Applied Biosystems Silencer ® siRNAs for G6PC2 Sigma-Aldrich siRNA and siRNA Panels for G6PC2 Sigma-Aldrich shRNA for G6PC2 Explore Sigma-Aldrich super-pooled esiRNAs                OriGene GFP tagged cDNA clones in CMV expression vector (see all 2 ): NM_001081686                                  Myc/DDK tagged cDNA clones in CMV expression vector (see all 2 ): NM_001081686                                  untagged cDNA clones in CMV expression vector (see all 2 ): NM_001081686  Primers: Browse
Quantitative PCR Central at Invitrogen for Q-PCR LUX™ Primers               OriGene genome-wide validated SYBR primer pairs: NM_021176 UniProtKB/Swiss-Prot: G6PC2_HUMAN, Q9NQR9 Function : May hydrolyze glucose-6-phosphate to glucose in the endoplasmic reticulum. May beresponsible for glucose production through glycogenolysis and gluconeogenesis (By similarity) Catalytic activity : D-glucose 6-phosphate + H(2)O = D-glucose + phosphateBiophysicochemical properties : Kinetic parameters: KM=0.45 mM for glucose-6-phosphate (at pH 6.5);Enzyme Number (IUBMB): EC 3.1.3.9
4 MGI mutant phenotypes (inferred from 1 allele ) (MGI details for G6pc2) :2 Gene Ontology (GO) molecular function terms (links to tree view) :
GO ID Qualified GO term Evidence PubMed IDs GO:0004346 glucose-6-phosphatase activity
IEA -- GO:0016787 hydrolase activity
IEA --
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Pathways & Interactions for G6PC2
(Pathways according to Invitrogen
(maps by GeneGo ),
Millipore ,
Cell Signaling Technology ,
Sigma-Aldrich ,
KEGG
and/or UniProtKB ,
Sets of similar genes according to GeneDecks ,
Proteins Network according to
SABiosciences ,
Interactions according to 1 UniProtKB ,
2 MINT , and/or
3 STRING ,
with links to IntAct and
Ensembl ,
Ontologies according to Gene Ontology Consortium 01 Apr 2009 via
Entrez Gene .)
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5 Sigma-Aldrich "Your Favorite Gene" Pathways for G6PC2 (Your Favorite Gene powered by Ingenuity) UniProtKB/Swiss-Prot: G6PC2_HUMAN, Q9NQR9 Pathway : Carbohydrate biosynthesis; gluconeogenesis
5/7 Interacting proteins for G6PC2 (ENSP00000282075 3 ) via UniProtKB, MINT, and/or STRING (see all 7
)About this table 1 Gene Ontology (GO) biological process term (links to tree view) :
GO ID Qualified GO term Evidence PubMed IDs GO:0006094 gluconeogenesis
IEA --
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Drugs & Compounds for G6PC2 (Chemical Compounds according to UniProtKB , Enzo Life Sciences ,
Sigma-Aldrich , Tocris Bioscience , and/or
Novoseek and Drugs according to
Enzo Life Sciences and/or
PharmGKB )
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Browse Tocris compounds for G6PC2 1 Novoseek chemical compound relationship for G6PC2 gene
About this table
Transcripts for G6PC2(GenBank/EMBL/DDBJ Accessions according to
Unigene
(Build 219 Homo sapiens; Jun 2 2009) or GenBank , RefSeq according to Entrez Gene ,
DOTS (version 10), and/or
AceView ,
non coding RNAs according to
RNAdb ,
ESTs according to GeneTide ,
exon structure from GeneLoc ,
alternative splicing isoforms according to ASD and/or
ECgene ,
RNAi Products from Invitrogen ,
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               OriGene 29mer shRNA kit in GFP-retroviral vectors (see all 2 ): NM_001081686 Sigma-Aldrich siRNA and siRNA Panels for G6PC2 Sigma-Aldrich shRNA for G6PC2 Explore Sigma-Aldrich super-pooled esiRNAs
Applied Biosystems Silencer ® siRNAs: NM_001081686 NM_021176
REFSEQ mRNAs for G6PC2 gene (2 alternative transcripts): NM_001081686.1 NM_021176.2
Applied Biosystems TaqMan ® Gene Expression Assays: NM_001081686 NM_021176
               OriGene GFP tagged cDNA clones in CMV expression vector (see all 2 ): NM_001081686                                  Myc/DDK tagged cDNA clones in CMV expression vector (see all 2 ): NM_001081686                                  untagged cDNA clones in CMV expression vector (see all 2 ): NM_001081686  
Additional cDNA sequence: AK310853.1 BC104778.1 BC113376.1 CR627438.1
3 DOTS entries : DT.40278606 DT.40219081 DT.99956306
24/50 AceView cDNA sequences (see all 50
):BQ086257 BM312191 BI438871 BQ548997 BU078726 NM_021176 BI467287 BQ267329 BU074138 BX499266 BQ777188 BI439199 BQ268961 BU579427 BI438359 CR627438 BU786441 BM128741 BM510248 CA771858 BM129145 BQ272569 BX499265 CA773435
highest scoring ESTs for G6PC2 :AL711489 BI438359 BM128001 BX499265 CA772726 BM510248 BQ267329 BQ268961 BQ777188 BU787823
Unigene Cluster for G6PC2: Glucose-6-phosphatase, catalytic, 2 Hs.283963 [show with all ESTs ] Unigene Representative Sequence: NM_021176 GeneLoc Exon Structure 5 Alternative Splicing Database (ASD) splice patterns (SP) for G6PC2 ExUns: 1a · 1b ^ 2 ^ 3 ^ 4 ^ 5a · 5b ^ 6a · 6b · 6c · 6d SP1 :       -     -   -           SP2 :       -     -             SP3 :     -   -   -   -   -           SP4 :                       SP5 :                      
About this scheme ECgene alternative splicing isoforms for G6PC2 2 Ensembl transcripts including schematic representations : ENST00000375363
ENST00000282075
Expression for G6PC2
(Experimental results according to
1 GeneNote
and GNF BioGPS ,
probe sets-to-genes annotations according to
2 GeneAnnot ,
3 GeneTide ,
Sets of similar genes according to GeneDecks ,
Electronic Northern calculations according to data from
UniGene (Build 219 Homo sapiens),
SAGE tags according to
CGAP ,
plus additional links to
SOURCE , and/or
GNF
BioGPS , and/or
EXPOLDB , and/or
UniProtKB ,
Expression Assays from
Applied Biosystems
)
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G6PC2 expression in normal and diseased human tissues Applied Biosystems TaqMan ® Gene Expression Assays for G6PC2 1 / 2 / 3
2 probe-sets matching G6PC2 gene Data from
(Publications) and GNF BioGPS About these images About these images CGAP SAGE TAG: CTCCAACCCASOURCE GeneReport for Unigene cluster: Hs.283963 UniProtKB/Swiss-Prot: G6PC2_HUMAN, Q9NQR9 Tissue specificity : Specifically expressed in pancreas and also detected to a lower extent intestis. Expressed by most islet cells in the pancreas (at protein level)
Orthologs for G6PC2
(Orthologs according to
1,2 HomoloGene (2 older version, for species not in 1 newer version),
3 euGenes ,
4 SGD
and/or
5 MGI Jun 06 2009,
with possible further links to
Flybase
and/or
WormBase ,
Gene Trees according to Ensembl )
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Orthologs for G6PC2 gene from 5 species
Organism
Gene
Locus
Description
Human Similarity
NCBI accessions
dog (Canis familiaris)
G6PC21
--
glucose-6-phosphatase, catalytic, 2
91.03(n) 90.08(a)
488389 XM_545511.2 XP_545511.2
chimpanzee (Pan troglodytes)
G6PC21
--
glucose-6-phosphatase, catalytic, 2
99.15(n) 98.59(a)
741431 XM_001155854.1 XP_001155854.1
cow (Bos taurus)
G6PC21
--
glucose-6-phosphatase, catalytic, 2
89.14(n) 89.52(a)
505012 XM_581235.3 XP_581235.1
mouse (Mus musculus)
G6pc21 , 5
2 (42.00 cM) 5
glucose-6-phosphatase, catalytic, 21, 5
84.79(n) 1 84.23(a) 1
14378 1 NM_021331.3 1 NP_067306.1 1 AF118761 5 AF118762 5 (see all 17 )
chicken (Gallus gallus)
G6PC21
--
glucose-6-phosphatase, catalytic, 2
74.97(n) 77.44(a)
424171 XM_422017.2 XP_422017.1
About this table Species with no ortholog for G6PC2 ENSEMBL Gene Tree for G6PC2 Paralogs for G6PC2 (Paralogs according to 1 HomoloGene and 2 Ensembl , Pseudogenes according to 3 Pseudogene.org )About This Section
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Paralogs for G6PC2 gene G6PC3 2 G6PC 2
SNPs/Variants for G6PC2 (According to the
1 NCBI SNP Database ,
2 Ensembl ,
3 PupaSUITE , and
UniProtKB ,
Linkage Disequilibrium by HapMap ,
Genotyping Reagents from
Applied Biosystems )
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HapMap Linkage Disequilibrium images for G6PC2 (up to first 250kb)
Disorders & Mutations for G6PC2
(in which this Gene is Involved, According to
OMIM, UniProtKB ,
Novoseek , PharmGKB ,
Genatlas , GeneTests ,
Blood group antigen gene mutations by BGMUT ,
HGMD, GAD ,
HuGE Navigator ,
BCGD ,
and/or TGDB .)
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OMIM: 608058 disorders : 612108 UniProtKB/Swiss-Prot: G6PC2_HUMAN, Q9NQR9
Genetic variation in G6PC2 is associated with fasting plasma glucose levels quantitativetrait locus type 1 (FGQTL1) [MIM:612108]. The normal fasting plasma glucose level in the plasma isdefined as less than 100 mg per deciliter (5.55 mmol per liter). Higher fasting plasma glucoselevels predict type 2 diabetes in young adults and increases the risk of mortality
1 Novoseek disease relationship for G6PC2 gene
About this table Human Genome Epidemiology Navigator: G6PC2 (8 documents)
Medical News for G6PC2 (Possibly Related Articles in
Doctor's Guide )
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--
Publications for G6PC2 (in
PubMed .
Associations of this gene to articles via
1 Novoseek ,
2 HGNC ,
3 Entrez Gene ,
4 UniProtKB/Swiss-Prot ,
5 UniProtKB/TrEMBL ,
6 GAD , and/or
7 PharmGKB )
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10/38 PubMed articles for G6PC2 gene (see all 38
): Alternative splicing of G6PC2, the gene coding for the islet-specific glucose-6-phosphatase catalytic subunit-related protein (IGRP), results in differential expression in human thymus and spleen compared with pancreas. (PubMed id 16520917) 1, 3, 4 Dogra R.S....Pugliese A. (2006) Cloning and characterization of the human and rat islet-specific glucose-6-phosphatase catalytic subunit-related protein (IGRP) genes. (PubMed id 11297555) 1, 3, 4 Martin C.C.... Hutton J.C. (2001) A polymorphism within the G6PC2 gene is associated with fasting plasma glucose levels. (PubMed id 18451265) 1, 3, 4 Bouatia-Naji N....Froguel P. (2008) The islet-specific glucose-6-phosphatase-related protein, implicated in diabetes, is a glycoprotein embedded in the endoplasmic reticulum membrane. (PubMed id 15044018) 1, 3, 4 Shieh J.-J.... Chou J.Y. (2004) Enzymatic characterization of the pancreatic islet-specific glucose- 6-phosphatase-related protein (IGRP). (PubMed id 14722102) 3, 4 Petrolonis A.J.... Hong S.-B. (2004) Structure and promoter activity of an islet-specific glucose-6-phosphatase catalytic subunit-related gene. (PubMed id 10078554) 2, 3 Ebert D.H....O'Brien R.M. (1999) Molecular cloning of a pancreatic islet-specific glucose-6-phosphatase catalytic subunit-related protein. (PubMed id 10078553) 2, 3 Arden S.D....Hutton J.C. (1999) Foxa2 and MafA regulate islet-specific glucose-6-phosphatase catalytic subunit-related protein gene expression. (PubMed id 18753309) 1, 3 Martin C.C....O'Brien R.M. (2008) In islet-specific glucose-6-phosphatase-related protein, the beta cell antigenic sequence that is targeted in diabetes is not responsible for the loss of phosphohydrolase activity. (PubMed id 16012821) 1, 3 Shieh J.J....Chou J.Y. (2005) An SNP in a methylatable Foxa2 binding site of the G6PC2 promoter is associated with insulin secretion in vivo and increased promoter activity in vitro. (PubMed id 18984742) 1, 3 Dos Santos C....Fradin D. (2008)
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Genome Databases showing G6PC2
(According to
Entrez Gene ,
HGNC ,
AceView ,
euGenes ,
Ensembl ,
miRBase ,
ECgene ,
and/or
H-InvDB )
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Other Databases showing G6PC2
(According to HUGE )
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Specialized Databases showing G6PC2 (According to ATLAS , HORDE , IMGT , MTDB, LEIDEN , UniProtKB/Swiss-Prot , and/or UniProtKB/TrEMBL ,Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot )About This Section
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-- Services for G6PC2 (Reagents available from Applied Biosystems , Antibodies and assays by Cell
Signaling Technology , Abcam , Novus Biologicals ,Sigma-Aldrich , R&D Systems , Millipore , Abnova , and/or Invitrogen , Clones available from OriGene ,and/or Invitrogen , Drugs and/or compounds by Sigma-Aldrich , Enzo Life Sciences , and/or Tocris Bioscience )About This Section
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Products for G6PC2:
Recombinant Proteins (IGRP ) Antibodies (IGRP )
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Transcripts for G6PC2
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GeneCards Homepage - Last full update: 2 Jul 2009
Incremental update: 13 Oct 2009