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G6PC2 Gene

protein-coding   GIFtS: 51

GC02P169466
glucose-6-phosphatase, catalytic, 2
Symbol approved by the HUGO Gene Nomenclature Committee (HGNC) database
Services    
(According to 1HGNC, 2Entrez Gene,
3UniProtKB/Swiss-Prot, 4UniProtKB/TrEMBL, 5OMIM, 6GeneLoc , and/or 7Ensembl, 8miRBase)
About This Section

Aliases
EC 3.1.3.9 3
IGRP 1, 2, 3, 5
MGC141936 2
Descriptions
G-6-Pase 2 3
G6Pase 2 3
Islet-specific glucose-6-phosphatase catalytic
subunit-related protein 2, 3
glucose-6-phosphatase, catalytic, 2 2
islet-specific G6CP-related protein 2
islet-specific glucose-6-phosphatase-related protein 2
External Ids
HGNC: 289061
Entrez Gene: 578182
UniProtKB: Q9NQR93
Ensembl: ENSG000001522547
Search outside databases for aliases for G6PC2 gene

Previous GC identifers: GC02P169961 GC02P169583

(According to Entrez Gene, Wikipedia's Gene Wiki,
UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL)
About This Section

EntrezGene summary for G6PC2:
This gene encodes an enzyme belonging to the glucose-6-phosphatase catalytic subunit family. These
enzymes are part of a multicomponent integral membrane system that catalyzes the hydrolysis of
glucose-6-phosphate, the terminal step in gluconeogenic and glycogenolytic pathways, allowing the
release of glucose into the bloodstream. The family member encoded by this gene is found in
pancreatic islets and does not exhibit phosphohydrolase activity, but it is a major target of
cell-mediated autoimmunity in diabetes. Several alternatively spliced transcript variants of this
gene have been described, but their biological validity has not been determined. [provided by
RefSeq]

UniProtKB/Swiss-Prot: G6PC2_HUMAN, Q9NQR9
Function: May hydrolyze glucose-6-phosphate to glucose in the endoplasmic reticulum. May be
responsible for glucose production through glycogenolysis and gluconeogenesis (By similarity)

Gene Wiki entry for G6PC2

(According to GeneLoc and/or HGNC, and/or
Entrez Gene (NCBI build 36),
and/or miRBase,
Genomic Views according to UCSC and Ensembl, Transcription factor binding sites according to SABiosciences)
About This Section

Genomic View:
UCSC Golden Path with GeneCards custom track

 Transcription factor binding sites upstream to the G6PC2 gene  

Entrez Gene cytogenetic band: 2q24.3   Ensembl cytogenetic band:  2q24.3   HGNC cytogenetic band: 2q24-q31

G6PC2 Gene in genomic location: bands according to Ensembl, locations according to (and/or Entrez Gene and/or Ensembl if different)

GeneLoc gene densities for chromosome 2         GeneLoc Exon Structure

GeneLoc location for GC02P169466:     (about GC identifiers)

Start:
169,465,996 bp from pter
End:
169,474,756 bp from pter
Size:
8,761 bases
Orientation:
plus strand
RefSeq DNA sequence:
NC_000002.10  NT_005403.16  
(According to 1UniProtKB, and/or Ensembl, Phosphorylation sites according to 2Phosphosite, RefSeq according to NCBI, PDB rendering according to OCA and/or Proteopedia, Recombinant Proteins from Invitrogen, Millipore, Sigma-Aldrich, R&D Systems, Enzo Life Sciences, Abnova, OriGene and/or, Abcam,
Biochemical Assays by Invitrogen, Millipore, R&D Systems, Cell Signaling Technology, and/or Enzo Life Sciences, Ontologies according to Gene Ontology Consortium 01 Apr 2009 and Entrez Gene, Antibodies by Invitrogen, Millipore, Sigma-Aldrich, R&D Systems, Cell Signaling Technology, Abcam, Abnova, and/or Novus Biologicals)
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UniProtKB/Swiss-Prot: G6PC2_HUMAN, Q9NQR9 (See protein sequence)
Recommended Name: Glucose-6-phosphatase 2  
Size: 355 amino acids; 40580 Da
Subcellular location: Endoplasmic reticulum membrane; Multi-pass membrane protein
Secondary accessions: Q6AHZ0
Alternative splicing: 2 isoforms:  Q9NQR9-1   Q9NQR9-2   

Post-translational modifications:

  • N-glycosylated; the non-glycosylated form is more unstable and is degraded through the proteasome1


  • REFSEQ proteins (2 alternative transcripts): 
    NP_001075155.1  NP_066999.1  


    ENSEMBL proteins: 
    ENSP00000364512 ENSP00000282075 


    Human Recombinant Proteins 
    Browse Drug Discovery Central at Invitrogen for human recombinant proteins
    Browse Purified and Recombinant Proteins at Millipore
    Browse Human Recombinant Proteins at Sigma-Aldrich  
    Browse R&D Systems for human recombinant proteins
    Browse recombinant and purified proteins available from Enzo Life Sciences
    Recombinant Proteins from Abcam (IGRP)
    Browse Abnova for Human Recombinant Proteins
                    Browse Origene for full length recombinant human proteins expressed in human HEK293 cells 

    4 Gene Ontology (GO) cellular component terms (links to tree view):

    GO IDQualified GO termEvidencePubMed IDs
    GO:0005783 endoplasmic reticulum IEA--
    GO:0005789 endoplasmic reticulum membrane IEA--
    GO:0016020 membrane IEA--
    GO:0016021 integral to membrane IEA--
    About this table

    Antibodies for G6PC2: 
    Browse Antibodies Central at Invitrogen
    Browse Millipore's Extensive Line of Mono- and Polyclonal Antibodies
    Browse Antibodies at Sigma-Aldrich
    Browse R&D Systems for Antibodies
    Antibodies from Abcam (IGRP), each with their AbpromiseSM
    Browse Abnova for Monoclonal and Polyclonal Antibodies
    Search Novus for antibodies for G6PC2

    Assays for G6PC2: 
    Browse Invitrogen for biochemical assays
    Browse Kits and Assays available from Millipore
    Browse R&D Systems for biochemical assays
    Browse biochemical assays available from Enzo Life Sciences

    (According to InterPro, ProtoNet, UniProtKB, and/or BLOCKS, Sets of similar genes according to GeneDecks)
    About This Section

    2 InterPro domains/families:
     IPR016275 Glucose-6-phosphatase
     IPR000326 P_Acid_Pase_2/haloperoxidase


       GeneDecks  G6PC2 for the domains selected above  
    About GeneDecksing

    Graphical View of Domain Structure for InterPro Entry Q9NQR9

    ProtoNet protein and cluster: Q9NQR9

    1 Blocks protein family: IPB000326 PA-phosphatase related phosphoesterase

    UniProtKB/Swiss-Prot: G6PC2_HUMAN, Q9NQR9
    Similarity: Belongs to the glucose-6-phosphatase family

    (According to MGI Jun 06 2009, UniProtKB, IUBMB,and/or Genatlas,
    shRNA from OriGene, Sigma-Aldrich, RNAi from Sigma-Aldrich,
    RNAi Products, Clones, and Q-PCR Products from Invitrogen, Millipore, OriGene, and/or Abnova, siRNAs from Applied Biosystems, SYBR primers from OriGene, Cell-based Assays from Millipore, Ontologies according to Gene Ontology Consortium 01 Apr 2009 via Entrez Gene.)
    About This Section

    Inhib.
    RNA:
    Invitrogen RNAi Products for gene knock-down (G6PC2)
    Browse for Gene Knock-down Tools from Millipore
    Browse Abnova for Chimera RNAi Products
                   OriGene 29mer shRNA kit in GFP-retroviral vectors (see all 2): NM_001081686

                  Applied Biosystems Silencer® siRNAs for G6PC2

                  Sigma-Aldrich siRNA and siRNA Panels for G6PC2  
                         Sigma-Aldrich shRNA for G6PC2  
                         Explore Sigma-Aldrich super-pooled esiRNAs  

    Clones:Browse Clone Ranger at Invitrogen for clones
    Browse Clones for the Expression of Recombinant Proteins Available from Millipore
                   OriGene GFP tagged cDNA clones in CMV expression vector (see all 2): NM_001081686
                                     Myc/DDK tagged cDNA clones in CMV expression vector (see all 2): NM_001081686
                                     untagged cDNA clones in CMV expression vector (see all 2): NM_001081686 

    Primers: Browse Quantitative PCR Central at Invitrogen for Q-PCR LUX™ Primers
                  OriGene genome-wide validated SYBR primer pairs: NM_021176

    UniProtKB/Swiss-Prot: G6PC2_HUMAN, Q9NQR9
    Function: May hydrolyze glucose-6-phosphate to glucose in the endoplasmic reticulum. May be
    responsible for glucose production through glycogenolysis and gluconeogenesis (By similarity)
    Catalytic activity: D-glucose 6-phosphate + H(2)O = D-glucose + phosphate
    Biophysicochemical properties: Kinetic parameters: KM=0.45 mM for glucose-6-phosphate (at pH 6.5);
    Enzyme Number (IUBMB): EC 3.1.3.9 

    4 MGI mutant phenotypes (inferred from 1 allele(MGI details for G6pc2):

    behavior/neurologicalendocrine/exocrine glandhomeostasis/metabolismreproductive system

    2 Gene Ontology (GO) molecular function terms (links to tree view):

    GO IDQualified GO termEvidencePubMed IDs
    GO:0004346 glucose-6-phosphatase activity IEA--
    GO:0016787 hydrolase activity IEA--
    About this table

    (Pathways according to Invitrogen (maps by GeneGo), Millipore, Cell Signaling Technology, Sigma-Aldrich, KEGG and/or UniProtKB,
    Sets of similar genes according to GeneDecks, Proteins Network according to SABiosciences, Interactions according to 1UniProtKB, 2MINT, and/or 3STRING, with links to IntAct and Ensembl, Ontologies according to Gene Ontology Consortium 01 Apr 2009 via Entrez Gene.)
    About This Section


    5 Sigma-Aldrich "Your Favorite Gene" Pathways for  G6PC2  (Your Favorite Gene powered by Ingenuity) 
     Glycolysis/Gluconeogenesis
     FXR/RXR Activation
     Starch and Sucrose Metabolism
     Estrogen Receptor Signaling
     Galactose Metabolism

       GeneDecks  G6PC2 for the pathways selected above  
    About GeneDecksing

    5 Kegg Pathways  (Kegg details for G6PC2):
     hsa00010 Glycolysis / Gluconeogenesis
     hsa00052 Galactose metabolism
     hsa00500 Starch and sucrose metabolism
     hsa04910 Insulin signaling pathway
     hsa04920 Adipocytokine signaling pathway

       GeneDecks  G6PC2 for the pathways selected above  
    About GeneDecksing
    UniProtKB/Swiss-Prot: G6PC2_HUMAN, Q9NQR9
    Pathway: Carbohydrate biosynthesis; gluconeogenesis


    5/7 Interacting proteins for G6PC2 (ENSP000002820753) via UniProtKB, MINT, and/or STRING (see all 7 )

    InteractantInteraction Details
    GeneCardExternal ID(s)
    PDX1ENSP000003704213STRING (score=.936)
    FOXA2ENSP000003663193STRING (score=.921)
    PAX6ENSP000003684243STRING (score=.894)
    ENSG00000206394ENSP000003728973STRING (score=.848)
    SLC37A4ENSP000003390483STRING (score=.816)
    About this table

    1 Gene Ontology (GO) biological process term (links to tree view):

    GO IDQualified GO termEvidencePubMed IDs
    GO:0006094 gluconeogenesis IEA--
    About this table
    (Chemical Compounds according to UniProtKB, Enzo Life Sciences, Sigma-Aldrich, Tocris Bioscience, and/or Novoseek and Drugs according to Enzo Life Sciences and/or PharmGKB)
    About This Section

    Browse drugs & compounds from Enzo Life Sciences
    Browse Small Molecules at Sigma-Aldrich

    Browse Tocris compounds for G6PC2
    1 Novoseek chemical compound relationship for G6PC2 gene
    Compound   Score   Articles   PubMed IDs for Articles with Shared Sentences (# sentences)
    glucose 18.59 18 18753309 (3), 18451265 (3), 17265032 (2), 18984742 (2) (see all 5)
    About this table


    (GenBank/EMBL/DDBJ Accessions according to
    Unigene (Build 219 Homo sapiens; Jun 2 2009) or GenBank,
    RefSeq according to Entrez Gene,
    DOTS (version 10), and/or AceView,
    non coding RNAs according to RNAdb,
    ESTs according to GeneTide,
    exon structure from GeneLoc, alternative splicing isoforms according to ASD and/or ECgene,
    RNAi Products from Invitrogen, Millipore, and/or Abnova,
    siRNAs from Applied Biosystems, Sigma-Aldrich,
    shRNA from Sigma-Aldrich, OriGene,
    Tagged/untagged cDNA clones from OriGene,
    Expression Assays from Applied Biosystems)
    About This Section

    Inhib.
    RNA:
    Invitrogen RNAi Products for gene knock-down (G6PC2)
    Browse for Gene Knock-down Tools from Millipore
    Browse Abnova for Chimera RNAi Products
                   OriGene 29mer shRNA kit in GFP-retroviral vectors (see all 2): NM_001081686

                  Sigma-Aldrich siRNA and siRNA Panels for G6PC2  
                         Sigma-Aldrich shRNA for G6PC2  
                         Explore Sigma-Aldrich super-pooled esiRNAs  

    Applied Biosystems Silencer® siRNAs: 

    NM_001081686  NM_021176  

    REFSEQ mRNAs for G6PC2 gene (2 alternative transcripts): 

    NM_001081686.1   NM_021176.2   

    Applied Biosystems TaqMan ® Gene Expression Assays: 

    NM_001081686  NM_021176  

                   OriGene GFP tagged cDNA clones in CMV expression vector (see all 2): NM_001081686
                                     Myc/DDK tagged cDNA clones in CMV expression vector (see all 2): NM_001081686
                                     untagged cDNA clones in CMV expression vector (see all 2): NM_001081686 

    Additional cDNA sequence: 

    AK310853.1 BC104778.1 BC113376.1 CR627438.1 

    3 DOTS entries:

    DT.40278606  DT.40219081  DT.99956306 

    24/50 AceView cDNA sequences (see all 50 ):

    BQ086257 BM312191 BI438871 BQ548997 BU078726 NM_021176 BI467287 BQ267329 
    BU074138 BX499266 BQ777188 BI439199 BQ268961 BU579427 BI438359 CR627438 
    BU786441 BM128741 BM510248 CA771858 BM129145 BQ272569 BX499265 CA773435 

    highest scoring ESTs for G6PC2:

    AL711489 BI438359 BM128001 BX499265 CA772726 BM510248 BQ267329 BQ268961 BQ777188 BU787823 

    Unigene Cluster for G6PC2:

    Glucose-6-phosphatase, catalytic, 2
    Hs.283963  [show with all ESTs]
    Unigene Representative Sequence: NM_021176


    GeneLoc Exon Structure

    5 Alternative Splicing Database (ASD) splice patterns (SP) for G6PC2

    ExUns: 1a · 1b ^ 2 ^ 3 ^ 4 ^ 5a · 5b ^ 6a · 6b · 6c · 6d
    SP1:                    -           -     -                           
    SP2:                    -           -                                 
    SP3:              -     -     -     -     -                           
    SP4:                                                                  
    SP5:                                                                  

    About this scheme

    ECgene alternative splicing isoforms for G6PC2

    2 Ensembl transcripts including schematic representations:
    ENST00000375363  ENST00000282075  
    (Experimental results according to 1GeneNote and GNF BioGPS,
    probe sets-to-genes annotations according to 2GeneAnnot , 3GeneTide , Sets of similar genes according to GeneDecks, Electronic Northern calculations according to data from UniGene (Build 219 Homo sapiens), SAGE tags according to CGAP, plus additional links to SOURCE, and/or GNF BioGPS, and/or EXPOLDB, and/or UniProtKB,
    Expression Assays from Applied Biosystems )
    About This Section

    G6PC2 expression in normal and diseased human tissues

     Applied Biosystems TaqMan ® Gene Expression Assays for G6PC2

    1 / 2 / 3

    2 probe-sets matching G6PC2 gene


    Affymetrix
    probe-set
    Array  GeneAnnot data GeneNote data GeneTide data
    # genes Sensitivity Specificity Correlation Length Gb_Accession Consensus Uniqueness Score Rank

    221453_at2, 3 U133-A 1 1.00 1.00 -- -- NM_021176 0.60 1.00 0.82 1

    221453_at2 U133Plus2 1 1.00 1.00 -- -- -- -- -- -- --
    About this table
    Data from (Publications) and GNF BioGPS
        About these images
    About these images

    CGAP SAGE TAG: CTCCAACCCA

    SOURCE GeneReport for Unigene cluster: Hs.283963

    UniProtKB/Swiss-Prot: G6PC2_HUMAN, Q9NQR9
    Tissue specificity: Specifically expressed in pancreas and also detected to a lower extent in
    testis. Expressed by most islet cells in the pancreas (at protein level)

    (Orthologs according to 1,2HomoloGene (2older version, for species not in 1newer version), 3euGenes, 4SGD and/or 5MGI Jun 06 2009, with possible further links to Flybase and/or WormBase, Gene Trees according to Ensembl)
    About This Section


    Orthologs for G6PC2 gene from 5 species
    Organism Gene Locus Description Human
    Similarity
    NCBI accessions
    dog
    (Canis familiaris)
    G6PC21   -- glucose-6-phosphatase, catalytic, 2 91.03(n)
    90.08(a)
    488389  XM_545511.2  XP_545511.2 
    chimpanzee
    (Pan troglodytes)
    G6PC21   -- glucose-6-phosphatase, catalytic, 2 99.15(n)
    98.59(a)
    741431  XM_001155854.1  XP_001155854.1 
    cow
    (Bos taurus)
    G6PC21   -- glucose-6-phosphatase, catalytic, 2 89.14(n)
    89.52(a)
    505012  XM_581235.3  XP_581235.1 
    mouse
    (Mus musculus)
    G6pc21, 5 2 (42.00 cM)5
    glucose-6-phosphatase, catalytic, 21, 5 84.79(n)1
    84.23(a)1
    143781  NM_021331.31  NP_067306.11 
     AF1187615  AF1187625  (see all 17)
    chicken
    (Gallus gallus)
    G6PC21   -- glucose-6-phosphatase, catalytic, 2 74.97(n)
    77.44(a)
    424171  XM_422017.2  XP_422017.1 
    About this table        Species with no ortholog for G6PC2

    ENSEMBL Gene Tree for G6PC2
    (Paralogs according to 1HomoloGene
    and 2Ensembl, Pseudogenes according to 3Pseudogene.org)
    About This Section

    Paralogs for G6PC2 gene
    G6PC32  G6PC2  

    (According to the 1NCBI SNP Database, 2Ensembl, 3PupaSUITE, and UniProtKB, Linkage Disequilibrium by HapMap, Genotyping Reagents from Applied Biosystems)
    About This Section


    10/89 NCBI SNPs in G6PC2 are shown (see all 89 )
    (Click for Applied Biosystems TaqMan ® Genotyping Assay)  (see all 104)
    ABGenomic DataTranscription DataAllele Frequencies
    SNP IDValidChr 2 posSequenceRecsAA
    Chg
    TypeMoreRecsAllele
    freq
    PopTotal
    sample
    More
    ------------
    rs5174131,2
    A,C,F,H,O169464354(+) TTTAAT/GTGGAA 2 -- ng51 tfbs37Minor allele frequency- G:0.04NA EU EA WA 542
    rs5732251,2
    A,C,F,H,O169465787(-) GTTTGC/TTTGAA 2 -- ng5112Minor allele frequency- N:0.00EA NA EU WA 1054
    rs4925941,2
    A,C,F,H,O169472422(-) GCCAAC/GTGCAA 2 V/L mis1 ut31 ese318Minor allele frequency- G:0.41MN NA EA EU WA 2960
    rs22323281,2
    A,C,F,H,O169472792(+) CTACTC/GTGTTC 2 S/C mis1 ut31 ese312Minor allele frequency- G:0.10EA EU WA NA 2470
    rs5405241,2
    A,C,F,H,O169465176(-) GACTAT/CGACTA 2 -- ng5111Minor allele frequency- C:0.29NA EU EA WA 980
    rs22323161,2
    C,F,H,O169465808(+) TGTTCG/ACACAA 2 -- ng5112Minor allele frequency- A:0.11EA NA EU WA 1052
    --
    rs5708761,2
    A,C,F,H169473623(-) aaaaaT/Aattca 2 -- ut31 ese34Minor allele frequency- A:0.37EU EA WA 412
    rs5672431,2
    A,C,F,H169473983(-) TGTTGT/CCCCTG 2 -- ut31 ese39Minor allele frequency- C:0.43EA NA EU WA 702
    rs168561411,2
    C,F,H169464948(+) ACAAAA/GTAACA 2 -- ng5111Minor allele frequency- G:0.03NA EU EA WA 966
    rs22323261,2
    C,F,H169472737(+) TGCTGT/CCTTTT 2 P/S mis1 ut318Minor allele frequency- C:0.00EU EA WA 838
    About this table

    HapMap Linkage Disequilibrium images for G6PC2 (up to first 250kb)

    (in which this Gene is Involved, According to OMIM, UniProtKB, Novoseek, PharmGKB, Genatlas, GeneTests, Blood group antigen gene mutations by BGMUT, HGMD, GAD, HuGE Navigator, BCGD, and/or TGDB.)
    About This Section

    OMIM: 608058   disorders: 612108  

    UniProtKB/Swiss-Prot: G6PC2_HUMAN, Q9NQR9

  • Genetic variation in G6PC2 is associated with fasting plasma glucose levels quantitative
    trait locus type 1 (FGQTL1) [MIM:612108]. The normal fasting plasma glucose level in the plasma is
    defined as less than 100 mg per deciliter (5.55 mmol per liter). Higher fasting plasma glucose
    levels predict type 2 diabetes in young adults and increases the risk of mortality
  • 1 Novoseek disease relationship for G6PC2 gene

    Disease   Score   Articles   PubMed IDs for Articles with Shared Sentences (# sentences)
    diabetes autoimmune 67.40 2 16012821 (1)
    About this table

    Human Genome Epidemiology Navigator: G6PC2 (8 documents)

    (Possibly Related Articles in Doctor's Guide)
    About This Section

      --

    (in PubMed. Associations of this gene to articles via 1Novoseek, 2HGNC, 3Entrez Gene, 4UniProtKB/Swiss-Prot, 5UniProtKB/TrEMBL, 6GAD, and/or 7PharmGKB)
    About This Section

    10/38 PubMed articles for G6PC2 gene (see all 38 ):
    (in PubMed, OMIM, and NCBI Bookshelf)
    About This Section

     ANDOR
    Aliases
    Free Text  

      Query String
    PubMed
    OMIM
    NCBI Bookshelf
      (Note: In FireFox, select the above section and copy using Ctrl-C)
    (According to Entrez Gene, HGNC, AceView, euGenes, Ensembl, miRBase, ECgene, and/or H-InvDB)
    About This Section

    Entrez Gene: 57818 HGNC: 28906 AceView: G6PC2 Ensembl:ENSG00000152254 euGenes: HUgn57818
    ECgene: G6PC2 H-InvDB: G6PC2
    (According to HUGE)
    About This Section

      --
    (According to ATLAS, HORDE, IMGT, MTDB, LEIDEN, UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL,
    Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot)
    About This Section

      --
    (Available from WIS Yeda, Salk, Tufts)
    About This Section

      --
    (Reagents available from Applied Biosystems, Antibodies and assays by Cell Signaling Technology, Abcam, Novus Biologicals,
    Sigma-Aldrich, R&D Systems, Millipore, Abnova, and/or Invitrogen, Clones available from OriGene,and/or Invitrogen, Drugs and/or compounds by Sigma-Aldrich,
    Enzo Life Sciences, and/or Tocris Bioscience)
    About This Section



    Products for G6PC2:
     TaqMan ® Gene Expression Assays
     TaqMan ® Genotyping Assays
      Free SNP selection tool



      Invitrogen iPath Pathways  Invitrogen BLOCK-iT™ RNAi
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     Predesigned and custom siRNAs for G6PC2 Browse antibodies at Sigma-Aldrich
     Explore super-pooled esiRNAs Browse proteins at Sigma-Aldrich
     Lentivirus-delivered shRNAs for G6PC2 Browse small molecules at Sigma-Aldrich
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