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Aliases for FZD10-AS1 Gene

Subcategory (RNA class) for FZD10-AS1 Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for FZD10-AS1 Gene

  • FZD10 Antisense RNA 1 (Head To Head) 2 3 5

External Ids for FZD10-AS1 Gene

Previous GeneCards Identifiers for FZD10-AS1 Gene

  • GC12M130634

Summaries for FZD10-AS1 Gene

GeneCards Summary for FZD10-AS1 Gene

FZD10-AS1 (FZD10 Antisense RNA 1 (Head To Head)) is an RNA Gene, and is affiliated with the non-coding RNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for FZD10-AS1 Gene

Genomics for FZD10-AS1 Gene

Regulatory Elements for FZD10-AS1 Gene

Enhancers for FZD10-AS1 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH12F130280 0.7 Ensembl 10.7 -118.2 -118245 0.6 HDGF PKNOX1 ATF1 ARNT ZNF493 GLI4 FEZF1 YBX1 ZNF2 ZNF302 ENSG00000256299 FZD10-AS1 STX2 GC12P130269 GC12M130315
GH12F130714 0.9 Ensembl ENCODE 10.3 -552.9 -552866 1.0 HDGF ZNF493 TSC22D4 EBF1 YBX1 PLRG1 ZKSCAN1 ZNF316 ZNF791 CTBP1 SFSWAP RIMBP2 FZD10-AS1 ENSG00000256299 ENSG00000256725 ENSG00000256343
GH12F130163 0.6 ENCODE 0.8 -0.2 -195 0.2 E2F1 MAZ POLR2A FZD10 FZD10-AS1
GH12F130161 0.2 ENCODE 0.8 +0.6 645 1.2 E2F1 SMARCC1 POLR2A RNF2 CBX2 TCF7L2 EZH2 CHD2 FZD10-AS1 ENSG00000280405
- Elite enhancer/Elite enhancer-gene association Download Table
Download GeneHancer data dump

Enhancers around FZD10-AS1 on UCSC Golden Path with GeneCards custom track

Promoters for FZD10-AS1 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters
ENSR00000439346 56 1601 SMARCC1 MAZ RNF2 SUZ12 CBX2 E2F1 POLR2A SMC3 CHD2 EZH2

Genomic Location for FZD10-AS1 Gene

Chromosome:
12
Start:
130,144,315 bp from pter
End:
130,162,256 bp from pter
Size:
17,942 bases
Orientation:
Minus strand

Genomic View for FZD10-AS1 Gene

Genes around FZD10-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
FZD10-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for FZD10-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for FZD10-AS1 Gene

Proteins for FZD10-AS1 Gene

Post-translational modifications for FZD10-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for FZD10-AS1 Gene

Domains & Families for FZD10-AS1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for FZD10-AS1 Gene

Function for FZD10-AS1 Gene

Phenotypes for FZD10-AS1 Gene

GenomeRNAi human phenotypes for FZD10-AS1:
genes like me logo Genes that share phenotypes with FZD10-AS1: view

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for FZD10-AS1 Gene

Localization for FZD10-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for FZD10-AS1 Gene

Pathways & Interactions for FZD10-AS1 Gene

SuperPathways for FZD10-AS1 Gene

No Data Available

Interacting Proteins for FZD10-AS1 Gene

Gene Ontology (GO) - Biological Process for FZD10-AS1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for FZD10-AS1 Gene

Transcripts for FZD10-AS1 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for FZD10-AS1 Gene

No ASD Table

Relevant External Links for FZD10-AS1 Gene

GeneLoc Exon Structure for
FZD10-AS1
ECgene alternative splicing isoforms for
FZD10-AS1

Expression for FZD10-AS1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for FZD10-AS1 Gene

mRNA differential expression in normal tissues according to GTEx for FZD10-AS1 Gene

This gene is overexpressed in Cervix - Endocervix (x5.5) and Prostate (x4.1).
genes like me logo Genes that share expression patterns with FZD10-AS1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for FZD10-AS1 Gene

Orthologs for FZD10-AS1 Gene

Evolution for FZD10-AS1 Gene

ENSEMBL:
Gene Tree for FZD10-AS1 (if available)
TreeFam:
Gene Tree for FZD10-AS1 (if available)

No data available for Orthologs for FZD10-AS1 Gene

Paralogs for FZD10-AS1 Gene

No data available for Paralogs for FZD10-AS1 Gene

Variants for FZD10-AS1 Gene

Sequence variations from dbSNP and Humsavar for FZD10-AS1 Gene

SNP ID Clin Chr 12 pos Sequence Context AA Info Type
rs1039304 -- 130,159,946(+) AGAAC(C/T)CTCAT intron-variant
rs10848025 -- 130,154,017(+) CCACT(A/G)TGTGT intron-variant
rs10848026 -- 130,163,164(+) CCGCT(C/G)GTGGA upstream-variant-2KB, reference, synonymous-codon
rs11060745 -- 130,152,705(+) GAGAC(C/T)ACTTG nc-transcript-variant
rs11060746 -- 130,153,365(+) CAAAC(A/G)TGTAG nc-transcript-variant

Structural Variations from Database of Genomic Variants (DGV) for FZD10-AS1 Gene

Variant ID Type Subtype PubMed ID
esv2746737 CNV deletion 23290073
esv2759921 CNV gain+loss 17122850
esv2760721 CNV gain+loss 21179565
esv34208 CNV gain 17911159
nsv1040854 CNV gain 25217958
nsv1112626 CNV deletion 24896259
nsv560735 CNV gain 21841781
nsv818937 CNV gain 17921354
nsv826546 CNV gain 20364138
nsv832552 CNV gain 17160897

Relevant External Links for FZD10-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
FZD10-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for FZD10-AS1 Gene

Disorders for FZD10-AS1 Gene

Relevant External Links for FZD10-AS1

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
FZD10-AS1

No disorders were found for FZD10-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for FZD10-AS1 Gene

Publications for FZD10-AS1 Gene

  1. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 3 64

Products for FZD10-AS1 Gene

Sources for FZD10-AS1 Gene

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