Free for academic non-profit institutions. Other users need a Commercial license

Aliases for FUT8-AS1 Gene

Subcategory (RNA class) for FUT8-AS1 Gene

antisense

Quality Score for this RNA gene is

3

Aliases for FUT8-AS1 Gene

  • FUT8 Antisense RNA 1 2 3 5
  • FUT8 Antisense RNA 1 (Non-Protein Coding) 2

External Ids for FUT8-AS1 Gene

ORGUL Members for FUT8-AS1 Gene

Previous GeneCards Identifiers for FUT8-AS1 Gene

  • GC14M065880

Summaries for FUT8-AS1 Gene

GeneCards Summary for FUT8-AS1 Gene

FUT8-AS1 (FUT8 Antisense RNA 1) is an RNA Gene, and is affiliated with the antisense RNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for FUT8-AS1 Gene

Genomics for FUT8-AS1 Gene

Regulatory Elements for FUT8-AS1 Gene

Enhancers for FUT8-AS1 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH14F065410 0.5 ENCODE 0.8 -0.2 -241 4.0 PKNOX1 MLX ARID4B SIN3A DMAP1 ZNF2 YY1 ZNF143 ZNF207 FOS LOC102723809 YBX1P1 LOC100506321 MIR625 RPL21P8 FUT8 FUT8-AS1 GC14M065468
GH14F065420 0.6 Ensembl ENCODE 0.4 -9.1 -9067 2.1 TAL1 ZMYM3 DPF2 ATF2 ARID1B ZNF121 JUND SMARCA4 ZBTB33 FUT8-AS1 GC14M065468
GH14F065430 0.8 Ensembl ENCODE 0.3 -20.4 -20378 4.2 HDAC1 ZNF146 PKNOX1 EBF1 GATA3 GATA2 ZSCAN29 ZNF263 SMARCE1 RNF2 FUT8 RPL21P8 MIR625 FUT8-AS1 GC14M065468
GH14F065438 0.2 ENCODE 0.3 -26.2 -26209 1.0 ARID1B HDAC2 NCOR1 L3MBTL2 SMARCA4 GATA2 TAL1 DPF2 GC14M065468 FUT8-AS1
GH14F065461 1 Ensembl ENCODE 0.2 -49.6 -49551 2.0 PKNOX1 TBL1XR1 BMI1 EBF1 RELA POLR2A CBX5 EED ETV6 CREM FUT8 GC14M065468 FUT8-AS1
- Elite enhancer/Elite enhancer-gene association Download Table
Download GeneHancer data dump

Enhancers around FUT8-AS1 on UCSC Golden Path with GeneCards custom track

Promoters for FUT8-AS1 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters
ENSR00000419516 -510 4001 PKNOX1 MLX ARID4B SIN3A DMAP1 ZNF2 YY1 ZNF143 ZNF207 FOS

Genomic Location for FUT8-AS1 Gene

Chromosome:
14
Start:
65,410,592 bp from pter
End:
65,412,690 bp from pter
Size:
2,099 bases
Orientation:
Minus strand

Genomic View for FUT8-AS1 Gene

Genes around FUT8-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
FUT8-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for FUT8-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for FUT8-AS1 Gene

Proteins for FUT8-AS1 Gene

Post-translational modifications for FUT8-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for FUT8-AS1 Gene

Domains & Families for FUT8-AS1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for FUT8-AS1 Gene

Function for FUT8-AS1 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for FUT8-AS1 Gene

Localization for FUT8-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for FUT8-AS1 Gene

Pathways & Interactions for FUT8-AS1 Gene

SuperPathways for FUT8-AS1 Gene

No Data Available

Interacting Proteins for FUT8-AS1 Gene

Gene Ontology (GO) - Biological Process for FUT8-AS1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for FUT8-AS1 Gene

Transcripts for FUT8-AS1 Gene

mRNA/cDNA for FUT8-AS1 Gene

(5) Additional mRNA sequences :
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for FUT8-AS1 Gene

FUT8 antisense RNA 1:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for FUT8-AS1 Gene

No ASD Table

Relevant External Links for FUT8-AS1 Gene

GeneLoc Exon Structure for
FUT8-AS1
ECgene alternative splicing isoforms for
FUT8-AS1

Expression for FUT8-AS1 Gene

SOURCE GeneReport for Unigene cluster for FUT8-AS1 Gene:

Hs.713717
No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for FUT8-AS1 Gene

Orthologs for FUT8-AS1 Gene

Evolution for FUT8-AS1 Gene

ENSEMBL:
Gene Tree for FUT8-AS1 (if available)
TreeFam:
Gene Tree for FUT8-AS1 (if available)

No data available for Orthologs for FUT8-AS1 Gene

Paralogs for FUT8-AS1 Gene

No data available for Paralogs for FUT8-AS1 Gene

Variants for FUT8-AS1 Gene

Sequence variations from dbSNP and Humsavar for FUT8-AS1 Gene

SNP ID Clin Chr 14 pos Sequence Context AA Info Type
rs111859848 -- 65,410,262(+) ATAAG(C/T)GAATT downstream-variant-500B, upstream-variant-2KB
rs111944405 -- 65,413,564(+) GAGGT(A/G)TCCGT intron-variant, upstream-variant-2KB
rs11624064 -- 65,412,921(+) ATGGG(C/G)CCGGC intron-variant, nc-transcript-variant, upstream-variant-2KB, utr-variant-5-prime
rs117017948 -- 65,410,708(+) CTTGG(A/G)TATCT nc-transcript-variant, upstream-variant-2KB, utr-variant-5-prime
rs117092881 -- 65,413,606(+) CAGCA(C/G)CTCGG intron-variant, upstream-variant-2KB

Structural Variations from Database of Genomic Variants (DGV) for FUT8-AS1 Gene

Variant ID Type Subtype PubMed ID
esv2748779 CNV deletion 23290073
nsv510639 CNV deletion 20534489
nsv832818 CNV gain 17160897

Relevant External Links for FUT8-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
FUT8-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for FUT8-AS1 Gene

Disorders for FUT8-AS1 Gene

Relevant External Links for FUT8-AS1

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
FUT8-AS1

No disorders were found for FUT8-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for FUT8-AS1 Gene

Publications for FUT8-AS1 Gene

  1. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 3 64
  2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 3 64

Products for FUT8-AS1 Gene

Sources for FUT8-AS1 Gene

Content
Loading form....