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Aliases & Descriptions for FUS
(According to
1 HGNC ,
2 Entrez Gene ,
3 UniProtKB/Swiss-Prot ,
4 UniProtKB/TrEMBL , 5 OMIM , 6 GeneLoc
, and/or 7 Ensembl ,
8 miRBase )About This Section
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Aliases CHOP 2 FUS-CHOP 2 FUS1 1 , 2 POMp75 3 TLS 1 , 2 , 3 , 5 TLS/CHOP 2 hnRNP-P2 1 , 2
Descriptions 75 kDa DNA-pairing protein 3 FUS-CHOP fusion protein 2 FUS-CHOP protein fusion 2 Fusion gene in myxoid liposarcoma 2 Oncogene FUS 3 Oncogene TLS 3 Translocated in liposarcoma protein 3 fus-like protein 2 fus/tls-chop oncogene 2 fusion (involved in t(12;16) in malignant liposarcoma) 2 fusion, derived from t(12;16) malignant liposarcoma 1 heterogeneous nuclear ribonucleoprotein P2 2 translocated in liposarcoma 2
Search outside databases for aliases for FUS genePrevious GC identifers: GC16P030273 GC16P031688 GC16P031188 GC16P031227
Summaries for FUS (According to Entrez Gene ,
Wikipedia's
Gene Wiki ,
UniProtKB/Swiss-Prot ,
and/or
UniProtKB/TrEMBL )
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UniProtKB/Swiss-Prot: FUS_HUMAN, P35637 Function : Binds both single-stranded and double-stranded DNA and promotes ATP-independent annealingof complementary single-stranded DNAs and D-loop formation in superhelical double-stranded DNA.May play a role in maintenance of genomic integrity
Gene Wiki entry for FUS
Genomic Location for FUS
(According to
GeneLoc and/or
HGNC , and/or
Entrez Gene (NCBI build 36) ,
and/or miRBase ,
Genomic Views according to
UCSC and
Ensembl ,
Transcription factor binding sites according to
SABiosciences )About This Section
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Genomic View : UCSC Golden Path with GeneCards custom track Transcription factor binding sites upstream to the FUS gene Entrez Gene cytogenetic band: 16p11.2 Ensembl cytogenetic band: 16p11.2 HGNC cytogenetic band: 16p11.2 FUS Gene in genomic location: bands according to Ensembl, locations according to
(and/or Entrez Gene and/or Ensembl if different) GeneLoc gene densities for chromosome 16 GeneLoc Exon Structure
GeneLoc location for GC16P031098:
(about GC identifiers )
Start:
31,098,954 bp from pter
End:
31,110,601 bp from pter
Size:
11,648 bases
Orientation:
plus strand
RefSeq DNA sequence: NC_000016.8 NT_010393.15 Proteins for FUS
(According to
1 UniProtKB ,
and/or Ensembl ,
Phosphorylation sites according to 2 Phosphosite ,
RefSeq according to NCBI ,
PDB rendering according to OCA and/or Proteopedia ,
Recombinant Proteins
from Invitrogen ,
Millipore ,
Sigma-Aldrich ,
R&D Systems ,
Enzo Life Sciences ,
Abnova ,
OriGene and/or,
Abcam ,
Biochemical Assays by
Invitrogen ,
Millipore ,
R&D Systems ,
Cell Signaling Technology , and/or
Enzo Life Sciences ,
Ontologies according to Gene
Ontology Consortium 01 Apr 2009 and
Entrez Gene ,
Antibodies by Invitrogen ,
Millipore ,
Sigma-Aldrich ,
R&D Systems ,
Cell Signaling Technology ,
Abcam ,
Abnova , and/or
Novus Biologicals )
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UniProtKB/Swiss-Prot: FUS_HUMAN, P35637 (See
protein sequence )Recommended Name: RNA-binding protein FUS Size : 526 amino acids; 53426 Da
Subunit : Component of nuclear riboprotein complexes. Interacts with ILF3, TDRD3 and SF1. Interactsthrough its C-terminus with FUSIP1
Subcellular location : Nucleus
Secondary accessions : Q9H4A8Alternative splicing : 2 isoforms : P35637-1 P35637-2
Post-translational modifications:
Arg-216 and Arg-218 are dimethylated, probably to asymmetric dimethylarginine1
View phosphorylation sites using PhosphoSite 2
REFSEQ proteins: NP_004951.1 ENSEMBL proteins: ENSP00000369594 ENSP00000346746 ENSP00000254108 Human Recombinant Proteins               OriGene Purified Recombinant Human Protein: FUS 3 Gene Ontology (GO) cellular component terms (links to tree view) :
About this table Antibodies for FUS: Assays for FUS:
Protein
Domains/ Families for FUS(According to InterPro , ProtoNet ,
UniProtKB , and/or BLOCKS ,
Sets of similar genes according to GeneDecks )
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Graphical View of Domain Structure for InterPro Entry P35637 ProtoNet protein and cluster: P35637
2 Blocks protein families : IPB000504 RNA-binding region RNP-1 (RNA recognition motif) IPB001876 Zn-finger UniProtKB/Swiss-Prot: FUS_HUMAN, P35637 Similarity : Belongs to the RRM TET familySimilarity : Contains 1 RanBP2-type zinc fingerSimilarity : Contains 1 RRM (RNA recognition motif) domain
Gene Function for FUS
(According to MGI Jun 06 2009, UniProtKB ,
IUBMB ,and/or Genatlas ,
shRNA from
OriGene ,
Sigma-Aldrich , RNAi from
Sigma-Aldrich ,
RNAi Products ,
Clones , and
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SYBR primers from OriGene ,
Cell-based Assays from Millipore ,
Ontologies according to Gene Ontology Consortium 01 Apr 2009 via
Entrez Gene .)
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               OriGene 29mer shRNA kit in GFP-retroviral vectors (see all 2 ): NM_001010850 Applied Biosystems Silencer ® siRNAs for FUS Sigma-Aldrich siRNA for FUS Sigma-Aldrich shRNA for FUS Explore Sigma-Aldrich super-pooled esiRNAs               OriGene GFP tagged cDNA clone in CMV expression vector: NM_004960                                  Myc/DDK tagged cDNA clone in CMV expression vector: NM_004960                                  untagged cDNA clones in CMV expression vector (see all 3 ): NM_001010850  Primers: Browse
Quantitative PCR Central at Invitrogen for Q-PCR LUX™ Primers               OriGene genome-wide validated SYBR primer pairs: NM_004960 UniProtKB/Swiss-Prot: FUS_HUMAN, P35637 Function : Binds both single-stranded and double-stranded DNA and promotes ATP-independent annealingof complementary single-stranded DNAs and D-loop formation in superhelical double-stranded DNA.May play a role in maintenance of genomic integrity
Genatlas biochemistry entry for FUS :RNA binding protein,highly homologous to EWS1,glycine-rich,regulator of BCR/ABL-mediatedleukemogenesis,rearranged in myxoid liposarcoma with translocation t(12;16) and in myeloidleukemia with translocation t(16;21)(q13;p11)
11 MGI mutant phenotypes (inferred from 2 alleles ) (MGI details for Fus) :5 Gene Ontology (GO) molecular function terms (links to tree view) :
About this table
Pathways & Interactions for FUS
(Pathways according to Invitrogen
(maps by GeneGo ),
Millipore ,
Cell Signaling Technology ,
Sigma-Aldrich ,
KEGG
and/or UniProtKB ,
Sets of similar genes according to GeneDecks ,
Proteins Network according to
SABiosciences ,
Interactions according to 1 UniProtKB ,
2 MINT , and/or
3 STRING ,
with links to IntAct and
Ensembl ,
Ontologies according to Gene Ontology Consortium 01 Apr 2009 via
Entrez Gene .)
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Gene Network CentralTM Interacting Genes and Proteins Network for FUS 5/148 Interacting proteins for FUS (P35637 1 , 2 ENSP00000254108 3 ) via UniProtKB, MINT, and/or STRING (see all 148
)About this table 1 Gene Ontology (GO) biological process term (links to tree view) :
GO ID Qualified GO term Evidence PubMed IDs GO:0000398 nuclear mRNA splicing, via spliceosome
EXP 12226669
About this table
Drugs & Compounds for FUS (Chemical Compounds according to UniProtKB , Enzo Life Sciences ,
Sigma-Aldrich , Tocris Bioscience , and/or
Novoseek and Drugs according to
Enzo Life Sciences and/or
PharmGKB )
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Browse Tocris compounds for FUS 2 Novoseek chemical compound relationships for FUS gene
Compound
Score
Articles
PubMed IDs for Articles with Shared Sentences (# sentences)
leucine
25.43
2
7987849 (1)
zinc
0.00
2
12594223 (2)
About this table
Transcripts for FUS(GenBank/EMBL/DDBJ Accessions according to
Unigene
(Build 219 Homo sapiens; Jun 2 2009) or GenBank , RefSeq according to Entrez Gene ,
DOTS (version 10), and/or
AceView ,
non coding RNAs according to
RNAdb ,
ESTs according to GeneTide ,
exon structure from GeneLoc ,
alternative splicing isoforms according to ASD and/or
ECgene ,
RNAi Products from Invitrogen ,
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               OriGene 29mer shRNA kit in GFP-retroviral vectors (see all 2 ): NM_001010850 Sigma-Aldrich siRNA for FUS Sigma-Aldrich shRNA for FUS Explore Sigma-Aldrich super-pooled esiRNAs
Applied Biosystems Silencer ® siRNAs: NM_004960
REFSEQ mRNAs for FUS gene: NM_004960.2
Applied Biosystems TaqMan ® Gene Expression Assays: NM_004960
              OriGene GFP tagged cDNA clone in CMV expression vector: NM_004960                                  Myc/DDK tagged cDNA clone in CMV expression vector: NM_004960                                  untagged cDNA clones in CMV expression vector (see all 3 ): NM_001010850  
Additional cDNA sequence: AB208902.1 AJ301611.1 AJ301612.1 AK098774.1 AK130774.1 AK290936.1 AK299129.1 AK301110.1 BC000402.2 BC002459.1 BC026062.2 BC051293.1 BT007131.1 CR456747.1 CR591758.1 CR598388.1 CR599479.1 CR602284.1 CR608658.1 CR615094.1 CR616248.1 CR618073.1 CR618104.1 CR621237.1 CR626089.1 CR626591.1 S62138.1 S62140.1 S75762.1 U00942.1 U36561.1 X71428.1
24/55 DOTS entries (see all 55
): DT.448733 DT.100876813 DT.95338699 DT.95305442 DT.100876818 DT.100876810 DT.40119887 DT.219776 DT.92413530 DT.95291133 DT.100876827 DT.120687296 DT.100798892 DT.120687278 DT.120687255 DT.100876817 DT.95190305 DT.120687153 DT.120687284 DT.40217294 DT.100761904 DT.100876816 DT.102840280 DT.120687164
24/933 AceView cDNA sequences (see all 933
):BQ720219 T32210 BM466247 AW248715 AA278178 AI655141 AA356876 AI074537 AI887609 BM471477 BM823701 AA315059 BM853646 CR618073 CR626591 BU538492 BE613463 BE206200 AA412717 BM692760 BQ054145 BI914071 BQ216384 CB134354
highest scoring ESTs for FUS :S62140 AA001940 AA001956 AA159528 AA160721 AA232483 AA279979 AA315059 AA356876 AA383497
Unigene Cluster for FUS: Fusion (involved in t(12;16) in malignant liposarcoma) Hs.513522 [show with all ESTs ] Unigene Representative Sequence: AB208902 GeneLoc Exon Structure 3 Ensembl transcripts including schematic representations : ENST00000380244
ENST00000354711
ENST00000254108
Expression for FUS
(Experimental results according to
1 GeneNote
and GNF BioGPS ,
probe sets-to-genes annotations according to
2 GeneAnnot ,
3 GeneTide ,
Sets of similar genes according to GeneDecks ,
Electronic Northern calculations according to data from
UniGene (Build 219 Homo sapiens),
SAGE tags according to
CGAP ,
plus additional links to
SOURCE , and/or
GNF
BioGPS , and/or
EXPOLDB , and/or
UniProtKB ,
Expression Assays from
Applied Biosystems
)
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FUS expression in normal and diseased human tissues Applied Biosystems TaqMan ® Gene Expression Assays for FUS 1 / 2 / 3
15 probe-sets matching FUS gene Data from
(Publications) and GNF BioGPS About these images About these images CGAP SAGE TAG: GGGGGTAACTSOURCE GeneReport for Unigene cluster: Hs.513522 Expression variation in blood from EXPOLDB for FUS
UniProtKB/Swiss-Prot: FUS_HUMAN, P35637 Tissue specificity : Ubiquitous
Orthologs for FUS
(Orthologs according to
1,2 HomoloGene (2 older version, for species not in 1 newer version),
3 euGenes ,
4 SGD
and/or
5 MGI Jun 06 2009,
with possible further links to
Flybase
and/or
WormBase ,
Gene Trees according to Ensembl )
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Orthologs for FUS gene from 5/9 species (see all 9
)
About this table Species with no ortholog for FUS ENSEMBL Gene Tree for FUS Paralogs for FUS (Paralogs according to 1 HomoloGene and 2 Ensembl , Pseudogenes according to 3 Pseudogene.org )About This Section
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Paralogs for FUS gene TAF15 2 EWSR1 2
SNPs/Variants for FUS (According to the
1 NCBI SNP Database ,
2 Ensembl ,
3 PupaSUITE , and
UniProtKB ,
Linkage Disequilibrium by HapMap ,
Genotyping Reagents from
Applied Biosystems )
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HapMap Linkage Disequilibrium images for FUS (up to first 250kb)
Disorders & Mutations for FUS
(in which this Gene is Involved, According to
OMIM, UniProtKB ,
Novoseek , PharmGKB ,
Genatlas , GeneTests ,
Blood group antigen gene mutations by BGMUT ,
HGMD, GAD ,
HuGE Navigator ,
BCGD ,
and/or TGDB .)
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OMIM: 137070 UniProtKB/Swiss-Prot: FUS_HUMAN, P35637
A chromosomal aberration involving FUS is a cause of a form of malignant myxoidliposarcoma. Translocation t(12;16)(q13;p11) with DDIT3 A chromosomal aberration involving FUS is a cause of acute myeloid leukemia (AML).Translocation t(16;21)(p11;q22) with ERG A chromosomal aberration involving FUS is associated with angiomatoid fibrous histiocytoma(AFH) [MIM:612160]. Translocation t(12;16)(q13;p11.2) with ATF1 generates a chimeric FUS/ATF1protein Defects in FUS are the cause of amyotrophic lateral sclerosis type 6 (ALS6) [MIM:608030].ALS6 is a familial form of amyotrophic lateral sclerosis. ALS is a neurodegenerative disorderaffecting upper motor neurons in the brain and lower motor neurons in the brain stem and spinalcord, resulting in fatal paralysis. Sensory abnormalities are absent. Death usually occurs within2 to 5 years. The etiology of amyotrophic lateral sclerosis is likely to be multifactorial,involving both genetic and environmental factors. The disease is inherited in 5-10%
10/12 Novoseek disease relationships for FUS gene (see all 12
)
Disease
Score
Articles
PubMed IDs for Articles with Shared Sentences (# sentences)
liposarcoma myxoid
95.31
15
18162764 (3), 7566973 (2), 9244875 (1), 19190116 (1) (see all 11 )
liposarcoma
87.10
15
8058726 (2), 15064749 (2), 15492825 (2), 18509338 (1) (see all 11 )
sarcoma clear cell
62.32
2
7493135 (1), 11063792 (1)
ewings sarcoma
60.16
3
12907633 (2), 7493135 (1)
sarcoma
59.91
9
18162764 (3), 12915480 (2), 10602519 (1), 18620564 (1) (see all 5 )
histiocytoma fibrous
58.31
2
11063792 (1), 12915480 (1)
lipoma
52.34
1
9244875 (1)
chondrosarcoma
48.78
3
18162764 (3)
tumors
37.17
13
17486070 (1), 18551309 (1), 19190116 (1), 7493135 (1) (see all 10 )
chromosomal aberrations
9.91
2
8058726 (2)
About this table Genatlas disease: FUS myxoid and round cell subtype liposarcoma,with breakpoint in t(12;16)(q13;p11) translocation GeneTests: FUS Amyotrophic Lateral Sclerosis Human Gene Mutation Database : FUS Human Genome Epidemiology Navigator: FUS (1 document)
Medical News for FUS (Possibly Related Articles in
Doctor's Guide )
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--
Publications for FUS (in
PubMed .
Associations of this gene to articles via
1 Novoseek ,
2 HGNC ,
3 Entrez Gene ,
4 UniProtKB/Swiss-Prot ,
5 UniProtKB/TrEMBL ,
6 GAD , and/or
7 PharmGKB )
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10/94 PubMed articles for FUS gene (see all 94
): Fusion of the dominant negative transcription regulator CHOP with a novel gene FUS by translocation t(12;16) in malignant liposarcoma. (PubMed id 7503811) 1, 2, 3, 4 Rabbitts T.H....Nathan P. (1993) Human POMp75 is identified as the pro-oncoprotein TLF/FUS: both POMp75 and POMp100 DNA homologous pairing activities are associated to cell prolifieration. (PubMed id 10442642) 1, 3, 4 Bertrand P.... Lopez B.S. (1999) Mutations in FUS, an RNA processing protein, cause familial amyotrophic lateral sclerosis type 6. (PubMed id 19251628) 3, 4 Vance C....Shaw C.E. (2009) Mutations in the FUS/TLS gene on chromosome 16 cause familial amyotrophic lateral sclerosis. (PubMed id 19251627) 3, 4 Kwiatkowski T.J. Jr.... Brown R.H. Jr. (2009) Identifying and quantifying in vivo methylation sites by heavy methyl SILAC. (PubMed id 15782174) 3, 4 Ong S.E.... Mann M. (2004) The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PubMed id 15489334) 3, 4 Gerhard D.S....Malek J. (2004) Human 75-kDa DNA-pairing protein is identical to the pro-oncoprotein TLS/FUS and is able to promote D-loop formation. (PubMed id 10567410) 3, 4 Baechtold H.... Akhmedov A.T. (1999) Oncoprotein TLS interacts with serine-arginine proteins involved in RNA splicing. (PubMed id 9774382) 3, 4 Yang L.... Hickstein D.D. (1998) Genomic structure of the human RBP56/hTAFII68 and FUS/TLS genes. (PubMed id 9795213) 3, 4 Morohoshi F....Ohki M. (1998) The transcriptional repressor ZFM1 interacts with and modulates the ability of EWS to activate transcription. (PubMed id 9660765) 3, 4 Zhang D.... Childs G. (1998)
Search for FUS
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Genome Databases showing FUS
(According to
Entrez Gene ,
HGNC ,
AceView ,
euGenes ,
Ensembl ,
miRBase ,
ECgene ,
and/or
H-InvDB )
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Other Databases showing FUS
(According to HUGE )
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Specialized Databases showing FUS (According to ATLAS , HORDE , IMGT , MTDB, LEIDEN , UniProtKB/Swiss-Prot , and/or UniProtKB/TrEMBL ,Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot )About This Section
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-- Services for FUS (Reagents available from Applied Biosystems , Antibodies and assays by Cell
Signaling Technology , Abcam , Novus Biologicals ,Sigma-Aldrich , R&D Systems , Millipore , Abnova , and/or Invitrogen , Clones available from OriGene ,and/or Invitrogen , Drugs and/or compounds by Sigma-Aldrich , Enzo Life Sciences , and/or Tocris Bioscience )About This Section
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GeneCards Homepage - Last full update: 2 Jul 2009
Incremental update: 13 Oct 2009