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Aliases for FTOP1 Gene

Aliases for FTOP1 Gene

  • Fat Mass And Obesity Associated Pseudogene 1 2 3 5

External Ids for FTOP1 Gene

Previous GeneCards Identifiers for FTOP1 Gene

  • GC02M043026

Summaries for FTOP1 Gene

GeneCards Summary for FTOP1 Gene

FTOP1 (Fat Mass And Obesity Associated Pseudogene 1) is a Pseudogene.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for FTOP1 Gene

Genomics for FTOP1 Gene

Regulatory Elements for FTOP1 Gene

Enhancers for FTOP1 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH02G042770 1.1 Ensembl ENCODE 9.4 +27.8 27812 0.6 HDAC1 CTCF RB1 ARID4B MAX EBF1 RAD21 ZNF143 SMC3 ZSCAN29 OXER1 MTA3 KCNG3 FTOP1 GC02P042792
GH02G042956 1.9 FANTOM5 Ensembl ENCODE dbSUPER 5.3 -162.5 -162504 9.1 HDGF FOXA2 PKNOX1 ARNT MLX SIN3A ARID4B DMAP1 YY1 FOS FTOP1 THADA GC02M042943 ENSG00000224739
GH02G042791 1.7 FANTOM5 ENCODE dbSUPER 5.9 +4.5 4494 5.5 HNRNPUL1 MLX ZFP64 WRNIP1 ARID4B DMAP1 ZNF2 YY1 SLC30A9 CBX5 HAAO EML4 FTOP1
GH02G042905 1.4 Ensembl ENCODE dbSUPER 5.7 -108.5 -108471 4.0 PKNOX1 FEZF1 ZNF2 ZNF48 GLIS2 ZNF263 SP5 TSHZ1 ZNF592 ZNF610 ZFP36L2 ENSG00000234936 OXER1 HAAO FTOP1 COX7A2L LOC105374568 PIR35642
GH02G042859 1.1 Ensembl ENCODE 5.4 -60.5 -60520 0.3 ELF3 CBX3 ARID4B SIN3A ZSCAN9 RAD21 CBX5 ZNF143 FOS MIXL1 FTOP1 PIR35642 GC02P042853
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around FTOP1 on UCSC Golden Path with GeneCards custom track

Genomic Location for FTOP1 Gene

Chromosome:
2
Start:
42,797,225 bp from pter
End:
42,798,712 bp from pter
Size:
1,488 bases
Orientation:
Minus strand

Genomic View for FTOP1 Gene

Genes around FTOP1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
FTOP1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for FTOP1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for FTOP1 Gene

Proteins for FTOP1 Gene

Post-translational modifications for FTOP1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for FTOP1 Gene

Domains & Families for FTOP1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for FTOP1 Gene

Function for FTOP1 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for FTOP1 Gene

Localization for FTOP1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for FTOP1 Gene

Pathways & Interactions for FTOP1 Gene

SuperPathways for FTOP1 Gene

No Data Available

Interacting Proteins for FTOP1 Gene

Gene Ontology (GO) - Biological Process for FTOP1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for FTOP1 Gene

Drugs & Compounds for FTOP1 Gene

No Compound Related Data Available

Transcripts for FTOP1 Gene

mRNA/cDNA for FTOP1 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for FTOP1 Gene

No ASD Table

Relevant External Links for FTOP1 Gene

GeneLoc Exon Structure for
FTOP1
ECgene alternative splicing isoforms for
FTOP1

Expression for FTOP1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for FTOP1 Gene

mRNA differential expression in normal tissues according to GTEx for FTOP1 Gene

This gene is overexpressed in Liver (x5.1).

NURSA nuclear receptor signaling pathways regulating expression of FTOP1 Gene:

FTOP1
genes like me logo Genes that share expression patterns with FTOP1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for FTOP1 Gene

Orthologs for FTOP1 Gene

Evolution for FTOP1 Gene

ENSEMBL:
Gene Tree for FTOP1 (if available)
TreeFam:
Gene Tree for FTOP1 (if available)

No data available for Orthologs for FTOP1 Gene

Paralogs for FTOP1 Gene

No data available for Paralogs for FTOP1 Gene

Variants for FTOP1 Gene

Relevant External Links for FTOP1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
FTOP1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for FTOP1 Gene

Disorders for FTOP1 Gene

No disorders were found for FTOP1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for FTOP1 Gene

Publications for FTOP1 Gene

No publications were found for FTOP1 Gene.

Products for FTOP1 Gene

Sources for FTOP1 Gene

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