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Aliases for FTO-IT1 Gene

Subcategory (RNA class) for FTO-IT1 Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for FTO-IT1 Gene

  • FTO Intronic Transcript 1 2 3 5
  • FTO Intronic Transcript 1 (Non-Protein Coding) 2

External Ids for FTO-IT1 Gene

Previous GeneCards Identifiers for FTO-IT1 Gene

  • GC16P054074

Summaries for FTO-IT1 Gene

GeneCards Summary for FTO-IT1 Gene

FTO-IT1 (FTO Intronic Transcript 1) is an RNA Gene, and is affiliated with the non-coding RNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for FTO-IT1 Gene

Genomics for FTO-IT1 Gene

Regulatory Elements for FTO-IT1 Gene

Enhancers for FTO-IT1 Gene
GeneHancer Identifier Score Enhancer Sources TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Other Gene Targets for Enhancer

Enhancers around FTO-IT1 on UCSC Golden Path with GeneCards custom track

Genomic Location for FTO-IT1 Gene

Chromosome:
16
Start:
54,039,393 bp from pter
End:
54,040,726 bp from pter
Size:
1,334 bases
Orientation:
Plus strand

Genomic View for FTO-IT1 Gene

Genes around FTO-IT1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
FTO-IT1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for FTO-IT1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for FTO-IT1 Gene

Proteins for FTO-IT1 Gene

Post-translational modifications for FTO-IT1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for FTO-IT1 Gene

Domains & Families for FTO-IT1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for FTO-IT1 Gene

Function for FTO-IT1 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for FTO-IT1 Gene

Localization for FTO-IT1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for FTO-IT1 Gene

Pathways & Interactions for FTO-IT1 Gene

SuperPathways for FTO-IT1 Gene

No Data Available

Interacting Proteins for FTO-IT1 Gene

Gene Ontology (GO) - Biological Process for FTO-IT1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for FTO-IT1 Gene

Drugs & Compounds for FTO-IT1 Gene

No Compound Related Data Available

Transcripts for FTO-IT1 Gene

mRNA/cDNA for FTO-IT1 Gene

(3) Additional mRNA sequences :
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for FTO-IT1 Gene

FTO intronic transcript 1 (non-protein coding):
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for FTO-IT1 Gene

No ASD Table

Relevant External Links for FTO-IT1 Gene

GeneLoc Exon Structure for
FTO-IT1
ECgene alternative splicing isoforms for
FTO-IT1

Expression for FTO-IT1 Gene

mRNA expression in normal human tissues for FTO-IT1 Gene

mRNA differential expression in normal tissues according to GTEx for FTO-IT1 Gene

This gene is overexpressed in Lung (x5.3).

SOURCE GeneReport for Unigene cluster for FTO-IT1 Gene Hs.664629

genes like me logo Genes that share expression patterns with FTO-IT1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , mRNA Expression by UniProt/SwissProt and Protein tissue co-expression partners for FTO-IT1 Gene

Orthologs for FTO-IT1 Gene

Evolution for FTO-IT1 Gene

ENSEMBL:
Gene Tree for FTO-IT1 (if available)
TreeFam:
Gene Tree for FTO-IT1 (if available)

No data available for Orthologs for FTO-IT1 Gene

Paralogs for FTO-IT1 Gene

No data available for Paralogs for FTO-IT1 Gene

Variants for FTO-IT1 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Relevant External Links for FTO-IT1 Gene

Disorders for FTO-IT1 Gene

Relevant External Links for FTO-IT1

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
FTO-IT1

No disorders were found for FTO-IT1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for FTO-IT1 Gene

Publications for FTO-IT1 Gene

  1. Normalization and subtraction: two approaches to facilitate gene discovery. (PMID: 8889548) Bonaldo M.F. … Soares M.B. (Genome Res. 1996) 3 67

Products for FTO-IT1 Gene

Sources for FTO-IT1 Gene

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