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Aliases for FTCD-AS1 Gene

Subcategory (RNA class) for FTCD-AS1 Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for FTCD-AS1 Gene

  • FTCD Antisense RNA 1 2 3 5
  • FTCD Antisense RNA 1 (Non-Protein Coding) 2

External Ids for FTCD-AS1 Gene

Previous GeneCards Identifiers for FTCD-AS1 Gene

  • GC21P047572

Summaries for FTCD-AS1 Gene

GeneCards Summary for FTCD-AS1 Gene

FTCD-AS1 (FTCD Antisense RNA 1) is an RNA Gene, and is affiliated with the non-coding RNA class.

Additional gene information for FTCD-AS1 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for FTCD-AS1 Gene

Genomics for FTCD-AS1 Gene

GeneHancer (GH) Regulatory Elements for FTCD-AS1 Gene

Promoters and enhancers for FTCD-AS1 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH21I046152 Enhancer 1.2 Ensembl ENCODE 550.8 +1.9 1866 2.2 ATF1 FOXA2 ARID4B DMAP1 ZNF48 YY1 TCF12 ZNF766 GLIS2 ARID2 FTCD-AS1 MCM3AP SPATC1L ENSG00000228137 MCM3AP-AS1 DIP2A POFUT2 FTCD YBEY
GH21I046021 Enhancer 1.4 FANTOM5 Ensembl ENCODE dbSUPER 10.9 -128.8 -128827 2.8 USF1 ATF1 ASH1L ZNF384 CTBP1 ZNF766 MTA3 BRD9 POLR2A CBFA2T2 FTCD-AS1 FTCD COL6A1 LOC105372842
GH21I046108 Promoter/Enhancer 1.2 EPDnew ENCODE dbSUPER 12.2 -41.4 -41389 2.6 CTCF ZNF680 GLIS1 ZNF223 ZNF143 ZBTB33 COL6A2 FTCD-AS1 FTCD ENSG00000223901 MCM3AP-AS1 LSS YBEY DIP2A GC21P046125
GH21I046115 Enhancer 0.9 ENCODE dbSUPER 12.7 -33.9 -33879 4.4 KLF1 ZSCAN4 KLF17 ZIC2 ZFHX2 CTBP1 ZNF207 RCOR1 ZNF444 KLF8 FTCD FTCD-AS1 COL6A2 SPATC1L GC21P046125
GH21I046027 Enhancer 1 Ensembl ENCODE dbSUPER 10.9 -123.1 -123052 2.3 RXRA ZBTB21 ZNF189 NFIB REST ATF2 NR2F2 NFIC CREB1 TRIM28 FTCD FTCD-AS1 LOC105372842 COL6A1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around FTCD-AS1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for FTCD-AS1 Gene

Genomic Locations for FTCD-AS1 Gene
chr21:46,151,614-46,152,647
(GRCh38/hg38)
Size:
1,034 bases
Orientation:
Plus strand
chr21:47,571,528-47,572,561
(GRCh37/hg19)

Genomic View for FTCD-AS1 Gene

Genes around FTCD-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
FTCD-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for FTCD-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for FTCD-AS1 Gene

Proteins for FTCD-AS1 Gene

Post-translational modifications for FTCD-AS1 Gene

No Post-translational modifications

Other Protein References for FTCD-AS1 Gene

REFSEQ proteins:

No data available for DME Specific Peptides for FTCD-AS1 Gene

Domains & Families for FTCD-AS1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for FTCD-AS1 Gene

Function for FTCD-AS1 Gene

Phenotypes From GWAS Catalog for FTCD-AS1 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for FTCD-AS1 Gene

Localization for FTCD-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for FTCD-AS1 Gene

Pathways & Interactions for FTCD-AS1 Gene

SuperPathways for FTCD-AS1 Gene

No Data Available

Interacting Proteins for FTCD-AS1 Gene

Gene Ontology (GO) - Biological Process for FTCD-AS1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for FTCD-AS1 Gene

Drugs & Compounds for FTCD-AS1 Gene

No Compound Related Data Available

Transcripts for FTCD-AS1 Gene

mRNA/cDNA for FTCD-AS1 Gene

(1) REFSEQ mRNAs :
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for FTCD-AS1 Gene

No ASD Table

Relevant External Links for FTCD-AS1 Gene

GeneLoc Exon Structure for
FTCD-AS1
ECgene alternative splicing isoforms for
FTCD-AS1

Expression for FTCD-AS1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for FTCD-AS1 Gene

mRNA differential expression in normal tissues according to GTEx for FTCD-AS1 Gene

This gene is overexpressed in Liver (x35.3) and Kidney - Cortex (x6.8).
genes like me logo Genes that share expression patterns with FTCD-AS1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for FTCD-AS1 Gene

Orthologs for FTCD-AS1 Gene

Evolution for FTCD-AS1 Gene

ENSEMBL:
Gene Tree for FTCD-AS1 (if available)
TreeFam:
Gene Tree for FTCD-AS1 (if available)

No data available for Orthologs for FTCD-AS1 Gene

Paralogs for FTCD-AS1 Gene

No data available for Paralogs for FTCD-AS1 Gene

Variants for FTCD-AS1 Gene

Additional Variant Information for FTCD-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
FTCD-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for FTCD-AS1 Gene

Disorders for FTCD-AS1 Gene

Additional Disease Information for FTCD-AS1

No disorders were found for FTCD-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for FTCD-AS1 Gene

Publications for FTCD-AS1 Gene

No publications were found for FTCD-AS1 Gene.

Products for FTCD-AS1 Gene

Sources for FTCD-AS1 Gene

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