FSTL4 Gene
protein-coding GIFtS : 49
GCID: GC05 M132560
follistatin-like 4
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Aliasesfor FSTL4 gene
(According to
1 HGNC ,
2 Entrez Gene ,
3 UniProtKB/Swiss-Prot ,
4 UniProtKB/TrEMBL , 5 OMIM , 6 GeneLoc ,
7 Ensembl ,
8 DME ,
9 miRBase ,
and/or 10 fRNAdb )About This Section Aliases Follistatin-Like 4 1 2 KIAA10611 3 Follistatin-Like Protein 42 3 Follistatin-Related Protein 42
Export aliases for FSTL4 gene to outside databases Previous GC identifers: GC05M132609 GC05M127723
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Summariesfor FSTL4 gene (According to Entrez Gene ,
Tocris Bioscience ,
Wikipedia's
Gene Wiki ,
PharmGKB ,
UniProtKB/Swiss-Prot ,
and/or
UniProtKB/TrEMBL )
About This Section --
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Genomic Viewsfor FSTL4 gene
(According to
GeneLoc and/or
HGNC , and/or
Entrez Gene (NCBI build 37) ,
and/or miRBase ,
Genomic Views according to
UCSC (hg19) and
Ensembl (release 69) ,
Regulatory elements and Epigenetics data according to
QIAGEN ,
SABiosciences , and/or
SwitchGear Genomics )About This Section RefSeq DNA sequence: NC_000005.9 NC_018916.1 NT_034772.6 Regulatory elements: SABiosciences Regulatory transcription factor binding sites in the FSTL4 gene promoter: c-Fos JunB Fra-1 FosB MyoD C/EBPalpha Pax-3 FOXO1a c-Jun FOXO1 Other transcription factors Search SABiosciences Chromatin IP Primers for FSTL4 Epigenetics: QIAGEN PyroMark CpG Assay predesigned Pyrosequencing DNA Methylation assays in human , mouse , rat FSTL4
Genomic Location: Genomic View : UCSC Golden Path with GeneCards custom track Entrez Gene cytogenetic band: 5q31.1 Ensembl cytogenetic band: 5q31.1 HGNC cytogenetic band: 5q31.1 FSTL4 Gene in genomic location: bands according to Ensembl, locations according to
(and/or Entrez Gene and/or Ensembl if different) GeneLoc information about chromosome 5 GeneLoc Exon Structure
GeneLoc location for GC05M132560: view genomic region
(about GC identifiers )
Start:
132,532,147 bp from pter
End:
132,948,255 bp from pter
Size:
416,109 bases
Orientation:
minus strand
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Proteinsfor FSTL4 gene
(According to
1 UniProtKB ,
HORDE ,
neXtProt ,
Ensembl ,
and/or Reactome ,
Modification sites according to 2 PhosphoSitePlus ,
Specific Peptides from DME ,
Protein expression images according to data from SPIRE MOPED and PaxDb ,
RefSeq according to NCBI ,
PDB rendering according to OCA and/or Proteopedia ,
Recombinant Proteins
from
EMD Millipore ,
R&D Systems ,
GenScript ,
Enzo Life Sciences ,
OriGene ,
Novus Biologicals ,
Sino Biological ,
ProSpec , and/or
Uscn ,
Biochemical Assays by
EMD Millipore ,
R&D Systems ,
OriGene ,
GenScript ,
Cell Signaling Technology ,
Enzo Life Sciences , and/or
Uscn ,
Ontologies according to Gene
Ontology Consortium 01 Mar 2013 and
Entrez Gene ,
Antibodies by
EMD Millipore ,
R&D Systems ,
GenScript ,
Cell Signaling Technology ,
OriGene ,
Novus Biologicals ,
Thermo Fisher Scientific ,
Abcam , and/or
Uscn )
About This Section UniProtKB/Swiss-Prot: FSTL4_HUMAN, Q6MZW2 (See
protein sequence )Recommended Name: Follistatin-related protein 4 precursor Size : 842 amino acids; 93096 Da
Subcellular location : Secreted (Probable)
Secondary accessions : Q8TBU0 Q9UPU1Alternative splicing : 3 isoforms : Q6MZW2-1 Q6MZW2-2 Q6MZW2-3 (No experimental confirmation available)Explore the universe of human proteins at neXtProt for FSTL4: NX_Q6MZW2 Post-translational modifications:
View modification sites using PhosphoSitePlus 2 View neXtProt modification sites for NX_Q6MZW2 FSTL4 Protein expression data from MOPED and PaxDb : About this image REFSEQ proteins: NP_055897.1 ENSEMBL proteins: ENSP00000265342 ENSP00000427662 Human Recombinant Protein Products for FSTL4: Gene Ontology (GO): 1 cellular component term (GO ID links to tree view) : About this table
GO ID Qualified GO term Evidence PubMed IDs GO:0005576 extracellular region
IEA --
FSTL4 for ontologies About GeneDecksing FSTL4 Antibody Products: Assay Products for FSTL4:
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Protein
Domains / Familiesfor FSTL4 gene (According to InterPro , ProtoNet ,
UniProtKB , and/or BLOCKS ,
Sets of similar genes according to GeneDecks )
About This Section
FSTL4 for domains About GeneDecksing 5/10 InterPro domains/families (see all 10 ):
Graphical View of Domain Structure for InterPro Entry Q6MZW2 ProtoNet protein and cluster: Q6MZW2
3 Blocks protein families : IPB003598 Immunoglobulin C-2 type IPB003599 Immunoglobulin subtype IPB013098 Immunoglobulin I-set UniProtKB/Swiss-Prot: FSTL4_HUMAN, Q6MZW2 Similarity : Contains 1 EF-hand domainSimilarity : Contains 2 Ig-like (immunoglobulin-like) domainsSimilarity : Contains 1 Kazal-like domain
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Functionfor FSTL4 gene
(According to 1 UniProtKB ,
Genatlas ,
LifeMap Discovery™ ,
IUBMB , and/or
2 DME ,
Human phenotypes from GenomeRNAi ,
Animal models from MGI Mar 06 2013,
inGenious Targeting Laboratory ,
bound targets from SABiosciences ,
miRNA Gene Targets from miRTarBase ,
shRNA from
OriGene ,
Sirion Biotech ,
RNAi from
EMD Millipore ,
siRNAs from
OriGene ,
QIAGEN ,
microRNA from QIAGEN ,
Gene Editing from DNA2.0 ,
Sirion Biotech ,
Clones from EMD Millipore ,
OriGene ,
SwitchGear Genomics ,
GenScript ,
Sino Biological ,
DNA2.0 ,
and Vector BioLabs ,
Cell Lines from GenScript ,
LifeMap BioReagents ,
Sirion Biotech ,
In Situ Hybridization Assays from Advanced Cell Diagnostics ,
Ontologies according to Gene Ontology Consortium 01 Mar 2013 via
Entrez Gene .)
About This Section Gene Ontology (GO): 1 molecular function term (GO ID links to tree view) : About this table
GO ID Qualified GO term Evidence PubMed IDs GO:0005509 calcium ion binding
IEA --
FSTL4 for ontologies About GeneDecksing Phenotypes: 1 GenomeRNAi human phenotype for FSTL4 : 1 MGI mutant phenotype (inferred from 1 allele ) (MGI details for Fstl4) :
FSTL4 for phenotypes About GeneDecksing Animal Models: Clone Products: Browse Clones for the Expression of Recombinant Proteins Available from EMD Millipore OriGene Myc/DDK tagged cDNA clones in CMV expression vector in human , mouse , rat for FSTL4 (see all 3 ) OriGene untagged cDNA clones in CMV expression vector in human , mouse , rat for FSTL4 (see all 2 )OriGene custom cloning services - gene synthesis, subcloning, mutagenesis,
variant library, vector shuttling GenScript: all cDNA clones in your preferred vector: FSTL4 (NM_015082 ) Browse Sino Biological Human cDNA Clones DNA2.0 Custom Codon Optimized Gene
Synthesis Service for FSTL4 Vector BioLabs ready-to-use adenovirus/AAV for human , mouse , rat FSTL4
In Situ Assay Products: Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for FSTL4
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Pathways & Interactionsfor FSTL4 gene
(Pathways according to
EMD Millipore ,
R&D Systems ,
Cell Signaling Technology ,
KEGG ,
PharmGKB ,
BioSystems ,
Reactome ,
Tocris Bioscience ,
GeneGo (Thomson Reuters) ,
QIAGEN ,
and/or UniProtKB ,
Sets of similar genes according to GeneDecks ,
Interaction Networks according to
SABiosciences ,
and/or STRING ,
Interactions according to 1 UniProtKB ,
2 MINT ,
3 I2D , and/or
4 STRING ,
with links to IntAct and
Ensembl ,
Ontologies according to Gene Ontology Consortium 01 Mar 2013 via
Entrez Gene) .
About This Section Interactions: Search SABiosciences Gene Network CentralTM Interacting Genes and Proteins Networks for FSTL4 STRING Interaction
Network Preview (showing 1 interactants - click image to see more details)1 Interacting protein for FSTL4 (ENSP00000265342 4 ) via UniProtKB, MINT, STRING , and/or I2D About this table
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Drugs & Compoundsfor FSTL4 gene (Chemical Compounds according to UniProtKB , Enzo Life Sciences ,
EMD Millipore , Tocris Bioscience
HMDB ,
BitterDB , and/or
Novoseek , and Drugs according to
DrugBank ,
Enzo Life Sciences , and/or
PharmGKB , with drugs/clinical trials/news
search links to CenterWatch )
About This Section Browse Tocris compounds for FSTL4 Search CenterWatch for drugs/clinical trials and news about FSTL4
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Transcriptsfor FSTL4 gene (Secondary structures according to
fRNAdb ,
GenBank/EMBL/DDBJ Accessions according to
Unigene
(Build 235 Homo sapiens; Mar 10 2013) or GenBank , RefSeq according to Entrez Gene ,
DOTS (version 10), and/or
AceView ,
transcript ids from Ensembl
with links to UCSC ,
exon structure from GeneLoc ,
alternative splicing isoforms according to ASD and/or
ECgene ,
RNAi Products from
EMD Millipore ,
siRNAs from
OriGene ,
QIAGEN ,
shRNA from
OriGene ,
Sirion Biotech ,
microRNA from QIAGEN ,
Tagged/untagged cDNA clones from
OriGene ,
SwitchGear Genomics ,
GenScript ,
DNA2.0 ,
Vector BioLabs ,
Primers from
OriGene ,
SABiosciences , and/or
QIAGEN
)About This Section REFSEQ mRNAs for FSTL4 gene: NM_015082.1 Unigene Cluster for FSTL4:
Follistatin-like 4 Hs.483390 [show with all ESTs ] Unigene Representative Sequence: NM_015082 6 Ensembl transcripts including schematic representations, and UCSC links where relevant : ENST00000265342 (uc003kym.1 uc003kyn.1 ) ENST00000509525 ENST00000511375 ENST00000507112 ENST00000514998 ENST00000510685 Clone Products: OriGene Myc/DDK tagged cDNA clones in CMV expression vector in human , mouse , rat for FSTL4 (see all 3 ) OriGene untagged cDNA clones in CMV expression vector in human , mouse , rat for FSTL4 (see all 2 )OriGene custom cloning services - gene synthesis, subcloning, mutagenesis,
variant library, vector shuttling GenScript: all cDNA clones in your preferred vector: FSTL4 (NM_015082 ) DNA2.0 Custom Codon Optimized Gene
Synthesis Service for FSTL4 Vector BioLabs ready-to-use adenovirus/AAV for human , mouse , rat FSTL4
Additional cDNA sequence: AB028984.1 AK026109.1 AK055684.1 AK056284.1 BC024300.1 BX640845.1
6 DOTS entries : DT.203750 DT.100745134
DT.95080111 DT.120799696 DT.75118658 DT.102832166 24/38 AceView cDNA sequences (see all 38 ):
BX281824 BM712071 AK055684 BM504143 BQ082060 BQ955139 BM931134 AB028984 BU071076 AW627505 AA813585 BM670359 AW630123 AA600133 AI913177 BQ081869 AI808009 BG054507 AA922219 AK056284 BM504366 AA904974 AW197697 BC024300 GeneLoc Exon Structure
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Expression for FSTL4 gene
(RNA expression data according to
H-InvDB ,
NONCODE ,
miRBase , and
RNAdb ,
Expression images according to data from
BioGPS ,
Illumina Human BodyMap , and
CGAP
SAGE ,
Sets of similar genes according to GeneDecks ,
in vivo and in vitro expression data from LifeMap Discovery™ ,
plus additional links to
Genevestigator , and/or
SOURCE , and/or
BioGPS , and/or
UniProtKB ,
PCR Arrays from
SABiosciences ,
Primers from
OriGene ,
SABiosciences , and/or
QIAGEN ,
In Situ Hybridization Assays from Advanced Cell Diagnostics )
About This Section FSTL4 expression in normal human tissues (normalized intensities) See probesets specificity/sensitivity at GeneAnnot About this image BioGPS CGAP TAG: GAACCAAGGGAbout this image FSTL4 expression in embryonic tissues and stem cells Expression by the Database of Embryonic development, Stem cell research, and
Regenerative medicine About this table
1 LifeMap In Vivo Development Anatomical Compartment/Cell Tissue Anatomical Compartment
Cell Category (developmental path) Eye Retina Eye Expression: Positive Negative
Selective markerExperimental details:
Curated
Microarrays
In-situ hybridization
See FSTL4 Protein Expression from SPIRE MOPED and PaxDB Genevestigator expression for FSTL4 SOURCE GeneReport for Unigene cluster: Hs.483390 SABiosciences Custom PCR Arrays for FSTL4 Primer Products: OriGene genome-wide validated SYBR primer pairs in human , mouse , rat for FSTL4Browse OriGene validated miRNA SYBR primer pairs SABiosciences RT2 qPCR Primer Assay in human , mouse , rat FSTL4 QIAGEN QuantiTect SYBR Green Assays in human , mouse , rat FSTL4 QIAGEN QuantiFast Probe-based Assays in human , mouse , rat FSTL4 In Situ Assay Products: Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for FSTL4
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Orthologsfor FSTL4 gene
(Orthologs according to
1,2 HomoloGene (2 older version, for species not in 1 newer version),
3 euGenes ,
4 SGD
,
5 MGI Mar 06 2013,
with possible further links to
Flybase
and/or
WormBase ,
and/or
6 Ensembl pan taxonomic compara ,
Gene Trees according to Ensembl and
TreeFam )
About This Section
This gene was present in the common ancestor of animals.
Orthologs for FSTL4 gene from 5/15 species (see all 15 ) About this table
ENSEMBL Gene Tree for FSTL4 (if available)TreeFam Gene Tree for FSTL4 (if available)
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Paralogsfor FSTL4 gene (Paralogs according to
1 HomoloGene , 2 Ensembl , and 3 SIMAP , Pseudogenes according to 4 Pseudogene.org Build 68)About This Section Paralogs for FSTL4 gene FSTL1 2 FSTL5 2 6 SIMAP similar genes for FSTL4 using alignment to 2 protein entries: FSTL4_HUMAN (see all proteins ):DKFZp566D234 FSTL5 FSTL1 FST tmp_locus_3 AGRN
FSTL4 for paralogs About GeneDecksing
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Genomic Variantsfor FSTL4 gene (SNPs/Variants according to the
1 NCBI SNP Database ,
2 Ensembl ,
3 PupaSUITE ,
UniProtKB , and
DNA2.0 ,
Linkage Disequilibrium by HapMap ,
Structural Variations(CNVs/InDels/Inversions) from the Database of Genomic Variants , Mutations from the Human Gene
Mutation Database (HGMD) and the Locus Specific Mutation
Databases (LSDB) , Blood group antigen gene mutations by BGMUT ,
Resequencing Primers from QIAGEN ,
Cancer Mutation PCR Arrays and Assays and Copy Number PCR Arrays from SABiosciences )
About This Section
Genomic Data Transcription Related Data Allele Frequencies SNP ID Valid Clinical significance Chr 5 pos Sequence # AA Chg Type More # Allele freq Pop Total sample More
HapMap Linkage Disequilibrium report for FSTL4 (132532147 - 132782147 bp, first 250kb of FSTL4)
Structural Variations (Copy Number Variations, Insertions/Deletions, Inversions) Database of Genomic Variants (DGV): 10 variations for FSTL4 8 CNVs : 36345 51572 22666 62434 43604 99301 69202 44186 2 Indels : 69203 60559 Human Gene Mutation Database (HGMD) : FSTL4 SABiosciences Cancer Mutation PCR Assays
QIAGEN SeqTarget long-range PCR primers in human , mouse , rat for resequencing FSTL4
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Disorders
/ Diseasesfor FSTL4 gene
(in which this Gene is Involved, According to MalaCards ,
OMIM, UniProtKB ,
the University of Copenhagen DISEASES
database ,
Genatlas , GeneTests ,
GAD ,
HuGE Navigator ,
and/or TGDB .)
About This Section FSTL4 for disorders About MalaCards
FSTL4 for disorders About GeneDecksing Human Genome Epidemiology (HuGE) Navigator: FSTL4 (3 documents) Export disorders for FSTL4 gene to outside databases
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Publicationsfor FSTL4 gene (in
PubMed .
Associations of this gene to articles via
1 Entrez Gene ,
2 UniProtKB/Swiss-Prot ,
3 HGNC ,
4 GAD ,
5 PharmGKB ,
6 HMDB ,
7 DrugBank ,
8 UniProtKB/TrEMBL ,
9 Novoseek , and/or
10 fRNAdb )
About This Section PubMed articles for FSTL4 gene, integrated from 9 sources (see all 13 ): (articles sorted by number of sources associating them with FSTL4) Utopia : connect your pdf to the dynamic world of online information
An enigmatic fourth runt domain gene in the fugu genome: ancestral gene loss versus accelerated evolution. (PubMed id 15527507) 1 , 2 , 3 Glusman G.... Rowen L. (2004) Prediction of the coding sequences of unidentified human genes. XIV. The complete sequences of 100 new cDNA clones from brain which code for large proteins in vitro. (PubMed id 10470851) 1 , 2 , 3 Kikuno R....Ohara O. (1999) The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PubMed id 15489334) 1 , 2 Gerhard D.S....Malek J. (2004) A genome-wide linkage and association scan reveals nov el loci for hypertension and blood pressure traits. (PubMed id 22384028) 1 Guo Y....Thomas N.G. (2012) Ubiquitin ligase substrate identification through qua ntitative proteomics at both the protein and peptide levels. (PubMed id 21987572) 1 Lee K.A....Doedens J.R. (2011) Personalized smoking cessation: interactions between nicotine dose, dependence and quit-success genotype score. (PubMed id 20379614) 1 Rose J.E....Uhl G.R. (2010) Gene variants associated with ischemic stroke: the cardiovascular health study. (PubMed id 19023099) 1 Luke M.M....Psaty B.M. (2009) Association of gene variants with incident myocardial infarction in the Cardiovascular Health Study. (PubMed id 17975119) 1 Shiffman D....Psaty B.M. (2008) Genome-wide association study of 14,000 cases of seven common diseases and 3,000 shared controls. (PubMed id 17554300) 1 . (2007) The full-ORF clone resource of the German cDNA consortium. (PubMed id 17974005) 2 Bechtel S.... Schupp I. (2007)
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External Searches for FSTL4 gene
(in PubMed ,
OMIM , and NCBI Bookshelf ) About This Section
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Genome Databases showing FSTL4 gene
(According to
Entrez Gene ,
HGNC ,
AceView ,
euGenes ,
Ensembl ,
miRBase ,
ECgene ,
Kegg ,
and/or
H-InvDB )
About This Section
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Other Databases showing FSTL4 gene
(According to HUGE )
About This Section
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Specialized Databases showing FSTL4 gene (According to PharmGKB ,
ATLAS , HORDE , IMGT , LEIDEN , UniProtKB/Swiss-Prot , and/or UniProtKB/TrEMBL ,Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot )About This Section
Name Description
PharmGKB entry for FSTL4 Pharmacogenomics, SNPs, Pathways
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About This Section Patent Information for FSTL4 gene: Search GeneIP for patents involving FSTL4 GeneCards and IP: Japan Patent Office Licenses GeneCards European Patent Office Licenses GeneCards Improving the IP Search
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Productsfor FSTL4 gene (Antibodies, recombinant proteins, and assays from EMD Millipore , R&D Systems , OriGene , QIAGEN , GenScript , Cell Signaling Technology , SABiosciences , Novus Biologicals , Sino Biological , Enzo Life Sciences , Abcam , ProSpec , Uscn , Thermo Fisher Scientific , Gene Editing from DNA2.0 and Sirion Biotech , Clones from EMD Millipore , OriGene , GenScript , Sino Biological , DNA2.0 , SwitchGear Genomics , Vector BioLabs , Cell lines from GenScript , LifeMap BioReagents , and Sirion Biotech , PCR Arrays from SABiosciences , Drugs and/or compounds from EMD Millipore , Tocris Bioscience , and/or
Enzo Life Sciences , In Situ Hybridization Assays from Advanced Cell Diagnostics , Animal models from inGenious Targeting Laboratory )About This Section
Browse OriGene Antibodies OriGene shRNA RFP for FSTL4 OriGene 29mer shRNA kits in GFP-retroviral vector in human , mouse , rat for FSTL4 OriGene genome-wide validated SYBR primer pairs in human , mouse , rat for FSTL4 OriGene Protein Over-expression Lysate for FSTL4 Browse OriGene Fluorogenic Cell Assay Kits OriGene siRNA for FSTL4 Browse 3'-UTR reporter clones for miRNA target validation OriGene untagged cDNA clones in CMV expression vector in human , mouse , rat for FSTL4 OriGene Myc/DDK tagged cDNA clones in CMV expression vector in human , mouse , rat for FSTL4 Browse OriGene GFP tagged cDNA clones in CMV expression vector Browse OriGene MicroRNA Expression Plasmids Browse OriGene basic RS shRNAs Browse OriGene validated miRNA SYBR primer pairs OriGene Purified Protein for FSTL4 OriGene custom cloning services - gene synthesis, subcloning, mutagenesis,
variant library, vector shuttling OriGene Custom Antibody Services for FSTL4 OriGene Custom Protein Services for FSTL4 OriGene Custom Immunoassay Development
QIAGEN Custom miScript Target Protector blocks miRNA-binding site of in human, mouse, rat FSTL4 QIAGEN SeqTarget long-range PCR primers in human , mouse , rat for resequencing FSTL4 QIAGEN PyroMark CpG Assay predesigned Pyrosequencing DNA Methylation assays in human , mouse , rat FSTL4 QIAGEN FlexiTube/FlexiPlate siRNA for gene silencing in human , mouse , rat FSTL4 QIAGEN QuantiFast Probe-based Assays in human , mouse , rat FSTL4 QIAGEN QuantiTect SYBR Green Assays in human , mouse , rat FSTL4
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FSTL4 Proteins, Antibodies, CLIAs, and ELISAs
Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for FSTL4
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Vector BioLabs ready-to-use adenovirus/AAV for human , mouse , rat FSTL4
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Aliases for FSTL4
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