Set Analyses:
Advanced Search

Advanced Search

 
Search By
Section (entire)
for


 
or upload a file of gene symbols


Category   Symbol Source: HGNC EntrezGene Ensembl GeneCards RNA genes CroW21
GIFtS

FSCN2 Gene

protein-coding   GIFtS: 53
GCID: GC17P079495

fascin homolog 2, actin-bundling protein, retinal (Strongylocentrotus...

(Previous names: fascin (Strongylocentrotus purpuratus) homolog 2 (actin-bundling...)
 Explore 16 diseases affiliated with
FSCN2 via our new
 Human Malady Compendium 
Biological research products
for FSCN2
    

(According to 1HGNC, 2Entrez Gene,
3UniProtKB/Swiss-Prot, 4UniProtKB/TrEMBL, 5OMIM, 6GeneLoc, 7Ensembl, 8DME, 9miRBase, and/or 10fRNAdb)
About This Section

Aliases
Fascin Homolog 2, Actin-Bundling Protein, Retinal (Strongylocentrotus
Purpuratus)1 2
RFSN1 2 5
RP301 2 5
Fascin (Strongylocentrotus Purpuratus) Homolog 2 (Actin-Bundling Protein,
Retinal)1
Fascin-21
Retinal Fascin3

External Ids:    HGNC: 39601   Entrez Gene: 257942   Ensembl: ENSG000001867657   OMIM: 6076435   UniProtKB: O149263   

Export aliases for FSCN2 gene to outside databases

Previous GC identifers: GC17U990164 GC17M080035 GC17P080195 GC17P077110 GC17P074944


(According to Entrez Gene, Tocris Bioscience, Wikipedia's Gene Wiki, PharmGKB,
UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL)
About This Section

Entrez Gene summary for FSCN2:
This gene encodes a member of the fascin protein family. Fascins crosslink actin into filamentous bundles within
dynamic cell extensions. This family member is proposed to play a role in photoreceptor disk morphogenesis. A mutation
in this gene results in one form of autosomal dominant retinitis pigmentosa and macular degeneration. Multiple
transcript variants encoding different isoforms have been found for this gene. (provided by RefSeq, Jul 2008)

UniProtKB/Swiss-Prot: FSCN2_HUMAN, O14926
Function: Acts as an actin bundling protein. May play a pivotal role in photoreceptor cell-specific events, such as
disk morphogenesis

Gene Wiki entry for FSCN2


(According to GeneLoc and/or HGNC, and/or
Entrez Gene (NCBI build 37),
and/or miRBase,
Genomic Views according to UCSC (hg19) and Ensembl (release 69), Regulatory elements and Epigenetics data according to QIAGEN, SABiosciences, and/or SwitchGear Genomics)
About This Section
RefSeq DNA sequence:
NC_000017.10  NC_018928.1  NT_010783.15  
Regulatory elements:
   SABiosciences Regulatory transcription factor binding sites in the FSCN2 gene promoter:
         p53   AP-4   Tal-1beta   E47   GATA-2   E2F   E2F-1   c-Myb   TGIF   Pax-4a   
         Other transcription factors

SwitchGear Promoter luciferase reporter plasmidFSCN2 promoter sequence
   Search SABiosciences Chromatin IP Primers for FSCN2

Epigenetics:
QIAGEN PyroMark CpG Assay predesigned Pyrosequencing DNA Methylation assays in human, mouse, rat FSCN2


Genomic Location:
Genomic View: UCSC Golden Path with GeneCards custom track

Entrez Gene cytogenetic band: 17q25   Ensembl cytogenetic band:  17q25.3   HGNC cytogenetic band: 17q25

FSCN2 Gene in genomic location: bands according to Ensembl, locations according to (and/or Entrez Gene and/or Ensembl if different)
FSCN2 gene location

GeneLoc information about chromosome 17         GeneLoc Exon Structure

GeneLoc location for GC17P079495:  view genomic region     (about GC identifiers)

Start:
79,495,417 bp from pter      End:
79,504,156 bp from pter
Size:
8,740 bases      Orientation:
plus strand

(According to 1UniProtKB, HORDE, neXtProt, Ensembl, and/or Reactome, Modification sites according to 2PhosphoSitePlus, Specific Peptides from DME, Protein expression images according to data from SPIRE MOPED and PaxDb, RefSeq according to NCBI, PDB rendering according to OCA and/or Proteopedia, Recombinant Proteins from EMD Millipore, R&D Systems, GenScript, Enzo Life Sciences, OriGene, Novus Biologicals, Sino Biological, ProSpec, and/or Uscn,
Biochemical Assays by EMD Millipore, R&D Systems, OriGene, GenScript, Cell Signaling Technology, Enzo Life Sciences, and/or Uscn, Ontologies according to Gene Ontology Consortium 01 Mar 2013 and Entrez Gene, Antibodies by EMD Millipore, R&D Systems, GenScript, Cell Signaling Technology, OriGene, Novus Biologicals, Thermo Fisher Scientific, Abcam, and/or Uscn)
About This Section

UniProtKB/Swiss-Prot: FSCN2_HUMAN, O14926 (See protein sequence)
Recommended Name: Fascin-2  
Size: 492 amino acids; 55057 Da
Subcellular location: Cytoplasm, cytoskeleton (By similarity). Cell projection, stereocilium (By similarity)
Secondary accessions: A0AVC4

Explore the universe of human proteins at neXtProt for FSCN2: NX_O14926

Post-translational modifications:

  • View modification sites using PhosphoSitePlus2
  • View neXtProt modification sites for NX_O14926

  • FSCN2 Protein expression data from MOPED and PaxDb:    About this image 
    Estimated protein expression log10 (pmol).

    REFSEQ proteins (2 alternative transcripts): 
    NP_001070650.1  NP_036550.1  

    ENSEMBL proteins: 
     ENSP00000388716   ENSP00000334665  

    Human Recombinant Protein Products: 
    Browse Purified and Recombinant Proteins at EMD Millipore
    Browse R&D Systems for human recombinant proteins
    Browse recombinant and purified proteins available from Enzo Life Sciences
    Browse OriGene full length recombinant human proteins expressed in human HEK293 cells
    OriGene Protein Over-expression Lysate (see all 2): FSCN2
    OriGene Custom Protein Services for FSCN2 
    GenScript Custom Purified and Recombinant Proteins Services for FSCN2
    Browse Sino Biological Recombinant Proteins
    Browse ProSpec Recombinant Proteins
    Uscn Proteins for FSCN2

    Gene Ontology (GO): 3 cellular component terms (GO ID links to tree view):    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0005737cytoplasm IEA--
    GO:0015629actin cytoskeleton ISS--
    GO:0032420stereocilium IEA--


    FSCN2 for ontologies           About GeneDecksing



    FSCN2 Antibody Products: 
    Browse EMD Millipore's Extensive Line of Mono- and Polyclonal Antibodies
    Browse R&D Systems for Antibodies
    Browse OriGene Antibodies
    OriGene Custom Antibody Services for FSCN2 
    GenScript Custom Superior Antibodies Services for FSCN2
    Novus Biologicals FSCN2 Antibodies
    Search for Antibodies for FSCN2 at Abcam  
    Uscn Antibodies for FSCN2
    Search ThermoFisher Antibodies for FSCN2

    Assay Products for FSCN2: 
    Browse Kits and Assays available from EMD Millipore
    OriGene Custom Immunoassay Development
    Browse OriGene Fluorogenic Cell Assay Kits
    Browse R&D Systems for biochemical assays
    GenScript Custom Assay Services for FSCN2
    Browse Enzo Life Sciences for kits & assays
    Uscn ELISAs and CLIAs for FSCN2


    (According to InterPro, ProtoNet, UniProtKB, and/or BLOCKS, Sets of similar genes according to GeneDecks)
    About This Section

    FSCN2 for domains           About GeneDecksing

    3 InterPro domains/families:
     IPR022768 Fascin-domain
     IPR024703 Fascin
     IPR008999 Actin_cross-linking

    Graphical View of Domain Structure for InterPro Entry O14926

    ProtoNet protein and cluster: O14926

    UniProtKB/Swiss-Prot: FSCN2_HUMAN, O14926
    Similarity: Belongs to the fascin family


    (According to 1UniProtKB, Genatlas, LifeMap Discovery™, IUBMB, and/or 2DME, Human phenotypes from GenomeRNAi, Animal models from MGI Mar 06 2013,
    bound targets from SABiosciences, miRNA Gene Targets from miRTarBase shRNA from OriGene, RNAi from EMD Millipore, siRNAs from OriGene, QIAGEN, microRNA from QIAGEN, Gene Editing from DNA2.0, Clones from EMD Millipore, OriGene, SwitchGear Genomics, GenScript, Sino Biological, DNA2.0, and Vector BioLabs, Cell Lines from GenScript, LifeMap BioReagents, In Situ Hybridization Assays from Advanced Cell Diagnostics, Ontologies according to Gene Ontology Consortium 01 Mar 2013 via Entrez Gene.)
    About This Section

    Function Summary:

         UniProtKB/Swiss-Prot: FSCN2_HUMAN, O14926
    Function: Acts as an actin bundling protein. May play a pivotal role in photoreceptor cell-specific events, such as
    disk morphogenesis

    miRNA
    Products:
        
    Browse 3'-UTR reporter clones for miRNA target validation
    Browse MicroRNA Expression Plasmids
    QIAGEN Custom miScript Target Protector blocks miRNA-binding site of human, mouse, rat FSCN2
    Search QIAGEN for miScript miRNA Assays for microRNAs that regulate FSCN2
    Browse SwitchGear 3'UTR luciferase reporter plasmids
    Inhib. RNA
    Products:
        
    Browse for Gene Knock-down Tools from EMD Millipore
    OriGene 29mer shRNA kits in GFP-retroviral vector in human, mouse, rat for FSCN2 (see all 7)
    OriGene shRNA RFP: FSCN2
    OriGene siRNA: FSCN2
    QIAGEN FlexiTube/FlexiPlate siRNA for gene silencing in human, mouse, rat FSCN2

    Gene Editing
    Products:
    DNA2.0 Custom Protein Engineering Service for FSCN2

    Clone
    Products:
         
    Browse Clones for the Expression of Recombinant Proteins Available from EMD Millipore
    OriGene Myc/DDK tagged cDNA clones in CMV expression vector in human, mouse, rat for FSCN2 (see all 4)
    OriGene untagged cDNA clones in CMV expression vector in human, mouse, rat for FSCN2 (see all 2)
    OriGene custom cloning services – gene synthesis, subcloning, mutagenesis, variant library, vector shuttling 
    GenScript: all cDNA clones in your preferred vector (see all 2): FSCN2 (NM_012418)
    Browse Sino Biological Human cDNA Clones
    DNA2.0 Custom Codon Optimized Gene Synthesis Service for FSCN2
    Vector BioLabs ready-to-use adenovirus/AAV for human, mouse, rat FSCN2 

    Cell Line
    Products:
         
    GenScript Custom overexpressing Cell Line Services for FSCN2
    Search LifeMap BioReagents cell lines for FSCN2

    In Situ Assay
    Products:
       

     
    Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for FSCN2

    Gene Ontology (GO): 3 molecular function terms (GO ID links to tree view):    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0003779actin binding ISS--
    GO:0030674protein binding, bridging IEA--
    GO:0051015actin filament binding ISS--


    FSCN2 for ontologies           About GeneDecksing


    Animal Models:
         Mouse knock-outs for FSCN2: Fscn2tm1Sykk Fscn2tm2Sykk
         3 MGI mutant phenotypes (inferred from 3 alleles(MGI details for Fscn2):
     hearing/vestibular/ear  nervous system  vision/eye 

    FSCN2 for phenotypes           About GeneDecksing


    (Pathways according to EMD Millipore, R&D Systems, Cell Signaling Technology, KEGG, PharmGKB, BioSystems, Reactome, Tocris Bioscience, GeneGo (Thomson Reuters), QIAGEN, and/or UniProtKB, Sets of similar genes according to GeneDecks, Interaction Networks according to SABiosciences, and/or STRING, Interactions according to 1UniProtKB, 2MINT, 3I2D, and/or 4STRING, with links to IntAct and Ensembl, Ontologies according to Gene Ontology Consortium 01 Mar 2013 via Entrez Gene).
    About This Section



    Interactions:

        SABiosciences Gene Network CentralTM Interacting Genes and Proteins Network for FSCN2

    Gene Ontology (GO): 5 biological process terms (GO ID links to tree view):    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0007601visual perception TAS10783262
    GO:0009653anatomical structure morphogenesis TAS10783262
    GO:0030036actin cytoskeleton organization ISS--
    GO:0042462eye photoreceptor cell development ----
    GO:0051017actin filament bundle assembly TAS10783262


    FSCN2 for ontologies           About GeneDecksing



    (Chemical Compounds according to UniProtKB, Enzo Life Sciences, EMD Millipore, Tocris Bioscience HMDB, BitterDB, and/or Novoseek, and Drugs according to DrugBank, Enzo Life Sciences, and/or PharmGKB, with drugs/clinical trials/news search links to CenterWatch)
    About This Section
    Browse Small Molecules at EMD Millipore
    Browse drugs & compounds from Enzo Life Sciences

    Browse Tocris compounds for FSCN2
    Search CenterWatch for drugs/clinical trials and news about FSCN2 

    (Secondary structures according to fRNAdb,
    GenBank/EMBL/DDBJ Accessions according to
    Unigene (Build 235 Homo sapiens; Mar 10 2013) or GenBank,
    RefSeq according to Entrez Gene,
    DOTS (version 10), and/or AceView, transcript ids from Ensembl with links to UCSC,
    exon structure from GeneLoc, alternative splicing isoforms according to ASD and/or ECgene,
    RNAi Products from EMD Millipore,
    siRNAs from OriGene, QIAGEN, shRNA from OriGene, microRNA from QIAGEN,
    Tagged/untagged cDNA clones from OriGene, SwitchGear Genomics, GenScript, DNA2.0, Vector BioLabs, Primers from OriGene, SABiosciences, and/or QIAGEN )
    About This Section

    REFSEQ mRNAs for FSCN2 gene (2 alternative transcripts): 
    NM_001077182.2  NM_012418.3  

    Unigene Cluster for FSCN2:

    Fascin homolog 2, actin-bundling protein, retinal (Strongylocentrotus purpuratus)
    Hs.118555  [show with all ESTs]
    Unigene Representative Sequence: NM_001077182
    3 Ensembl transcripts including schematic representations, and UCSC links where relevant:
    ENST00000417245(uc010wuo.2 uc010wup.2) ENST00000334850 ENST00000527221


    miRNA
    Products:
         
    Browse 3'-UTR reporter clones for miRNA target validation
    Browse OriGene MicroRNA Expression Plasmids
    QIAGEN Custom miScript Target Protector blocks miRNA-binding site of human, mouse, rat FSCN2
    Search QIAGEN for miScript miRNA Assays for microRNAs that regulate FSCN2
    Browse SwitchGear 3'UTR luciferase reporter plasmids
    Inhib. RNA
    Products:
         
    Browse for Gene Knock-down Tools from EMD Millipore
    OriGene 29mer shRNA kits in GFP-retroviral vector in human, mouse, rat for FSCN2 (see all 7)
    OriGene shRNA RFP: FSCN2
    OriGene siRNA: FSCN2
    QIAGEN FlexiTube/FlexiPlate siRNA for gene silencing in human, mouse, rat FSCN2
    Clone
    Products:
         
    OriGene Myc/DDK tagged cDNA clones in CMV expression vector in human, mouse, rat for FSCN2 (see all 4)
    OriGene untagged cDNA clones in CMV expression vector in human, mouse, rat for FSCN2 (see all 2)
    OriGene custom cloning services – gene synthesis, subcloning, mutagenesis, variant library, vector shuttling 
    GenScript: all cDNA clones in your preferred vector (see all 2): FSCN2 (NM_012418)
    DNA2.0 Custom Codon Optimized Gene Synthesis Service for FSCN2
    Vector BioLabs ready-to-use adenovirus/AAV for human, mouse, rat FSCN2 
    Primer
    Products:
        
    OriGene genome-wide validated SYBR primer pairs in human, mouse, rat for FSCN2
    Browse OriGene validated miRNA SYBR primer pairs
    SABiosciences RT2 qPCR Primer Assay in human, mouse, rat FSCN2
      QIAGEN QuantiTect SYBR Green Assays in human, mouse, rat FSCN2
      QIAGEN QuantiFast Probe-based Assays in human, mouse, rat FSCN2

    Additional cDNA sequence: 

    AF030165.1 BC126295.1 BC130330.1 DQ426873.1 

    2 DOTS entries:

    DT.443550  DT.100741139 

    17 AceView cDNA sequences:

    BM929819 BM932109 BM709287 AI189621 AF030165 NM_012418 AA018553 BU732435 
    AA046412 BQ185852 AA017631 BQ186352 AA058860 AA046878 AA059324 AA018572 
    AI703219 

    GeneLoc Exon Structure

    2 Alternative Splicing Database (ASD) splice patterns (SP) for FSCN2    About this scheme

    ExUns: 1a · 1b ^ 2 ^ 3a · 3b
    SP1:                              
    SP2:                              


    ECgene alternative splicing isoforms for FSCN2

    (RNA expression data according to H-InvDB, NONCODE, miRBase, and RNAdb, Expression images according to data from BioGPS, Illumina Human BodyMap, and CGAP SAGE, Sets of similar genes according to GeneDecks, in vivo and in vitro expression data from LifeMap Discovery™, plus additional links to Genevestigator, and/or SOURCE, and/or BioGPS, and/or UniProtKB,
    PCR Arrays from SABiosciences, Primers from OriGene, SABiosciences, and/or QIAGEN, In Situ Hybridization Assays from Advanced Cell Diagnostics)
    About This Section

    FSCN2 expression in normal human tissues (normalized intensities)
    See probesets specificity/sensitivity at GeneAnnot
    About this imageBioGPS
    CGAP TAG: TTTGAGATGG

    Microarray
    RNAseq (Illumina Body Map)
    (100×FPKM)½
    SAGE (Serial Analysis of Gene Expression)

    About this image

    FSCN2 expression in embryonic tissues and stem cells
    Expression by the Database of Embryonic development, Stem cell research, and Regenerative medicine    About this table
    1 LifeMap In Vivo Development Anatomical Compartment/Cell 
    Tissue Anatomical Compartment CellCategory (developmental path)
    EyeOuter Nuclear LayerMature Rod CellsPhotoreceptors, Retina
    Expression: Positive    Negative     Selective marker
    Experimental details: Curated     Microarrays     In-situ hybridization
    Stem Cell Differentiation: 1 LifeMap Cell 
    NameCategory
    Posterior foregut-like cells (A scalable, suspensi...)

    See FSCN2 Protein Expression from SPIRE MOPED and PaxDB
    Genevestigator expression for FSCN2

    SOURCE GeneReport for Unigene cluster: Hs.118555

    UniProtKB/Swiss-Prot: FSCN2_HUMAN, O14926
    Tissue specificity: Localized specifically in the outer and inner segments of the photoreceptor cells in the retina

        SABiosciences Expression via Pathway-Focused PCR Array including FSCN2: 
              Cytoskeleton Regulators in human mouse rat

    Primer
    Products:
    OriGene genome-wide validated SYBR primer pairs in human, mouse, rat for FSCN2
    Browse OriGene validated miRNA SYBR primer pairs
    SABiosciences RT2 qPCR Primer Assay in human, mouse, rat FSCN2
    QIAGEN QuantiTect SYBR Green Assays in human, mouse, rat FSCN2
    QIAGEN QuantiFast Probe-based Assays in human, mouse, rat FSCN2
    In Situ
    Assay Products:
     

     
    Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for FSCN2

    (Orthologs according to 1,2HomoloGene (2older version, for species not in 1newer version), 3euGenes, 4SGD , 5MGI Mar 06 2013, with possible further links to Flybase and/or WormBase, and/or 6Ensembl pan taxonomic compara , Gene Trees according to Ensembl and TreeFam)
    About This Section

    This gene was present in the common ancestor of animals.

    Orthologs for FSCN2 gene from 6/17 species (see all 17)    About this table
    Organism Taxonomic
    classification
    Gene Description Human
    Similarity
    Orthology
    Type
    Details
    mouse
    (Mus musculus)
    Mammalia Fscn21 , 5 fascin homolog 2, actin-bundling protein, retinal (Strongylocentrotus more1, 5 85.84(n)1
    90.85(a)1
      11 (84.08 cM)5
    2380211  NM_172802.41  NP_766390.21 
     1203615345 
    chicken
    (Gallus gallus)
    Aves FSCN21 fascin homolog 2, actin-bundling protein, retinal (Strongylocentrotus more 76.51(n)
    70.47(a)
      429198  NM_001177738.1  NP_001171209.1 
    lizard
    (Anolis carolinensis)
    Reptilia FSCN26
    --
    70(a)
    1 ↔ 1
    2(98637253-98659158)
    African clawed frog
    (Xenopus laevis)
    Amphibia Xl.263332 Xenopus laevis transcribed sequence with weak similarity more 75.03(n)    CD328490.1 
    zebrafish
    (Danio rerio)
    Actinopterygii zgc732722 hypothetical protein MGC73272 74.98(n)   393743  BC059601.1 
    fruit fly
    (Drosophila melanogaster)
    Insecta sn3 actin filament organization actin binding 38(a)     --


    ENSEMBL Gene Tree for FSCN2 (if available)
    TreeFam Gene Tree for FSCN2 (if available) 

    (Paralogs according to 1HomoloGene,
    2Ensembl, and 3SIMAP, Pseudogenes according to 4Pseudogene.org Build 68)
    About This Section
    Paralogs for FSCN2 gene
    FSCN32  FSCN12  
    1 SIMAP similar gene for FSCN2 using alignment to 2 protein entries:     FSCN2_HUMAN (see all proteins):
    FSCN1

    FSCN2 for paralogs           About GeneDecksing



    (SNPs/Variants according to the 1NCBI SNP Database, 2Ensembl, 3PupaSUITE, UniProtKB, and DNA2.0, Linkage Disequilibrium by HapMap, Structural Variations(CNVs/InDels/Inversions) from the Database of Genomic Variants, Mutations from the Human Gene Mutation Database (HGMD) and the Locus Specific Mutation Databases (LSDB), Blood group antigen gene mutations by BGMUT, Resequencing Primers from QIAGEN, Cancer Mutation PCR Arrays and Assays and Copy Number PCR Arrays from SABiosciences)
    About This Section

    10/246 NCBI SNPs in FSCN2 are shown (see all 246    About this table
    Genomic DataTranscription Related DataAllele Frequencies
    SNP IDValidClinical
    significance
    Chr 17 posSequence#AA
    Chg
    TypeMore#Allele
    freq
    PopTotal
    sample
    More
    ----------
    rs1378539001,2
    C,untested79495606(+) GCCTCA/GTCAAC 4 I V mis10--------
    rs1512024181,2
    --79493422(+) GAGGCC/TGCGGC 2 -- us2k10--------
    rs1403892911,2
    --79493424(+) GGCCGC/TGGCGG 2 -- us2k10--------
    rs749993271,2
    C--79493427(+) CGCGGC/TGGGCA 2 -- us2k10--------
    rs1911157561,2
    --79493455(+) AGTTCA/GAGACC 2 -- us2k10--------
    rs1823574541,2
    --79493581(+) GAGCTC/TGAAGG 2 -- us2k10--------
    rs72211901,2
    C,F,A,H,--79493705(-) GCTAGG/AGTGCT 2 -- us2k126Minor allele frequency- A:0.27NS EA NA WA CSA 2562
    rs1890866391,2
    --79493877(+) TCGCAC/TACAGT 2 -- us2k10--------
    rs1931508061,2
    --79493906(+) TGTGAA/CTCATA 2 -- us2k10--------
    rs1163961961,2
    F,--79493917(+) GAGGCG/AGATGA 2 -- us2k11Minor allele frequency- A:0.03WA 118

    HapMap Linkage Disequilibrium report for FSCN2 (79495417 - 79504156 bp)
    Structural Variations (Copy Number Variations, Insertions/Deletions, Inversions)
    Database of Genomic Variants (DGV): 4 variations for FSCN2
         4 CNVs: 73071 5040 35515 5039
    Human Gene Mutation Database (HGMD): FSCN2

    Locus Specific Mutation Databases (LSDB): FSCN2

    SABiosciences Cancer Mutation PCR Assays
    QIAGEN SeqTarget long-range PCR primers in human, mouse, rat for resequencing FSCN2
    DNA2.0 Custom Variant and Variant Library Synthesis for FSCN2

    (in which this Gene is Involved, According to MalaCards, OMIM, UniProtKB, the University of Copenhagen DISEASES database, Novoseek, Genatlas, GeneTests, GAD, HuGE Navigator, and/or TGDB.)
    About This Section

    FSCN2 for disorders           About GeneDecksing

    OMIM gene information: 607643   
    OMIM disorders: 607921  
    UniProtKB/Swiss-Prot: FSCN2_HUMAN, O14926
  • Defects in FSCN2 are the cause of retinitis pigmentosa type 30 (RP30) [MIM:607921]. RP leads to degeneration
  • of retinal photoreceptor cells. Patients typically have night vision blindness and loss of midperipheral visual field.
    As their condition progresses, they lose their far peripheral visual field and eventually central vision as well. RP30
    inheritance is autosomal dominant

    16 diseases for FSCN2:    About MalaCards
    retinitis pigmentosa    retinitis    macular degeneration    retinitis pigmentosa 30
    dendritic cell sarcoma    retinal degeneration    esophageal squamous cell carcinoma    squamous cell carcinoma
    ehrlichiosis    histiocytosis    oral cancer    esophagitis
    colon cancer    blindness    sarcoma    carcinoma

    3 diseases from the University of Copenhagen DISEASES database for FSCN2:
    Histiocytosis     Carcinoma     Retinitis pigmentosa

    3 Novoseek disease relationships for FSCN2 gene    About this table

    Disease   -log (P-Val)   Hits   PubMed IDs for Articles with Shared Sentences (# sentences)
    retinitis pigmentosa 81 8 14609921 (2), 11527955 (2), 16280978 (2), 16043865 (1) (see all 5)
    retinal degeneration 62.5 3 17251446 (2)
    retinopathy 43.7 1 16043865 (1)

    Genetic Association Database (GAD): FSCN2
    Human Genome Epidemiology (HuGE) Navigator: FSCN2 (3 documents)

    Export disorders for FSCN2 gene to outside databases

    (in PubMed. Associations of this gene to articles via 1Entrez Gene, 2UniProtKB/Swiss-Prot, 3HGNC, 4GAD, 5PharmGKB, 6HMDB, 7DrugBank, 8UniProtKB/TrEMBL, 9 Novoseek, and/or 10fRNAdb)
    About This Section

    PubMed articles for FSCN2 gene, integrated from 9 sources (see all 20):
    (articles sorted by number of sources associating them with FSCN2)
        Utopia: connect your pdf to the dynamic
    world of online information

    1. Refinement of the RP17 locus for autosomal dominant retinitis pigmentosa, construction of a YAC contig and investigation of the candidate gene retinal fascin. (PubMed id 10234509)1, 2, 3 Bardien-Kruger S.... Ramesar R.S. (1999)
    2. Characterization of human retinal fascin gene (FSCN2) at 17q25: close physical linkage of fascin and cytoplasmic actin genes. (PubMed id 10783262)1, 2, 9 Tubb B.E.... Bryan J. (2000)
    3. Autosomal dominant macular degeneration associated with 208delG mutation in the FSCN2 gene. (PubMed id 14609921)1, 4, 9 Wada Y....Tamai M. (2003)
    4. Mutation of human retinal fascin gene (FSCN2) causes autosomal dominant retinitis pigmentosa. (PubMed id 11527955)1, 2, 9 Wada Y.... Tamai M. (2001)
    5. Sequence variations in the retinal fascin FSCN2 gene in a Spanish population with autosomal dominant retinitis pigmentosa or macular degeneration. (PubMed id 16280978)1, 4, 9 Gamundi M.J....Carballo M. (2005)
    6. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PubMed id 15489334)1, 2 Gerhard D.S....Malek J. (2004)
    7. [Molecular genetic analysis for Japanese patients with autosomal dominant retinitis pigmentosa] (PubMed id 14661542)1, 4 Wada Y. and Tamai M. (2003)
    8. Retinal fascin: functional nature, subcellular distribution, and chromosomal localization. (PubMed id 10892848)1, 2 Saishin Y.... Shimada S. (2000)
    9. The 208delG mutation in FSCN2 does not associate with retinal degeneration in Chinese individuals. (PubMed id 17251446)1, 9 Zhang Q....Guo X. (2007)
    10. The filopodium: a stable structure with highly regula ted repetitive cycles of elongation and persistence depending on the actin cros s-linker fascin. (PubMed id 21975552)1 SchAofer C....Hoffmann B. (2011)

    (in PubMed, OMIM, and NCBI Bookshelf)
    About This Section
     ANDOR
    Aliases
    Disorders
    Free Text  

      Query String
    PubMed
    OMIM
    NCBI Bookshelf
      (Note: In FireFox, select the above section and copy using Ctrl-C)

    (According to Entrez Gene, HGNC, AceView, euGenes, Ensembl, miRBase, ECgene, Kegg, and/or H-InvDB)
    About This Section
    Entrez Gene: 25794 HGNC: 3960 AceView: FSCN2 Ensembl:ENSG00000186765 euGenes: HUgn25794
    ECgene: FSCN2 H-InvDB: FSCN2

    (According to HUGE)
    About This Section
      --

    (According to PharmGKB, ATLAS, HORDE, IMGT, LEIDEN, UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL,
    Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot)
    About This Section
    NameDescription
    PharmGKB entry for FSCN2 Pharmacogenomics, SNPs, Pathways
    Mutations of the FSCN2 genehttp://www.retina-international.org/files/sci-news/fscn2mut.htm

    (Patent information from GeneIP,
    Licensable technologies from WIS Yeda, Salk, Tufts,
    IP news from LifeMap Sciences, Inc.)
    About This Section
    Patent Information for FSCN2 gene:
    Search GeneIP for patents involving FSCN2

    GeneCards and IP:
    Japan Patent Office Licenses GeneCards     European Patent Office Licenses GeneCards     Improving the IP Search



    (Antibodies, recombinant proteins, and assays from EMD Millipore, R&D Systems, OriGene, QIAGEN, GenScript, Cell Signaling Technology, SABiosciences, Novus Biologicals, Sino Biological, Enzo Life Sciences, Abcam, ProSpec, Uscn, Thermo Fisher Scientific, Gene Editing from DNA2.0, Clones from EMD Millipore, OriGene, GenScript, Sino Biological, DNA2.0, SwitchGear Genomics, Vector BioLabs, Cell lines from GenScript and LifeMap BioReagents, PCR Arrays from SABiosciences, Drugs and/or compounds from EMD Millipore, Tocris Bioscience, and/or Enzo Life Sciences),
    In Situ Hybridization Assays from
    Advanced Cell Diagnostics
    About This Section

     
     EMD Millipore Custom Antibody & Bulk Services
     EMD Millipore Preclinical / Clinical Development Services
     EMD Millipore Immunoassay Services
     EMD Millipore Target Screening & Profiling Services

      
     Browse Antibodies   Browse Cell Culture Products  
     Browse ELISAs   Browse Flow Cytometry Kits  
     Browse Primer Pairs   Browse Kinase Activity Assays/Reagents  
     Browse ELISpot Kits/Development Modules   Browse TFB/Immunoprecipitation Assays  
     Browse Apoptosis Detection Kits/Reagents   Browse Ubiquitin Proteasome Pathway (UPP) Assay Kits/Reagents  
     Browse DNA Damage/Repair Kits/Reagents   Browse Multiplex/Array Assay Kits/Reagents  
     Browse Cell Selection/Detection Kits/Reagents   Browse Secondary Antibodies/Controls/Staining Reagents  
     Browse Phosphatase Activity Assays/Reagents   Browse Recombinant/Natural Proteins  
     Browse OriGene Antibodies   OriGene shRNA RFP for FSCN2  
     OriGene 29mer shRNA kits in GFP-retroviral vector in human, mouse, rat for FSCN2   OriGene genome-wide validated SYBR primer pairs in human, mouse, rat for FSCN2  
     OriGene Protein Over-expression Lysate for FSCN2   Browse OriGene Fluorogenic Cell Assay Kits  
     OriGene siRNA for FSCN2   Browse 3'-UTR reporter clones for miRNA target validation  
     OriGene untagged cDNA clones in CMV expression vector in human, mouse, rat for FSCN2   OriGene Myc/DDK tagged cDNA clones in CMV expression vector in human, mouse, rat for FSCN2  
     Browse OriGene GFP tagged cDNA clones in CMV expression vector   Browse OriGene MicroRNA Expression Plasmids  
     Browse OriGene basic RS shRNAs   Browse OriGene validated miRNA SYBR primer pairs  
     Browse OriGene full length recombinant human proteins expressed in human HEK293 cells   OriGene custom cloning services - gene synthesis, subcloning, mutagenesis, variant library, vector shuttling  
     OriGene Custom Antibody Services for FSCN2   OriGene Custom Protein Services for FSCN2  
     OriGene Custom Immunoassay Development  

     
     
     QIAGEN Custom miScript Target Protector blocks miRNA-binding site of in human, mouse, rat FSCN2
     QIAGEN SeqTarget long-range PCR primers in human, mouse, rat for resequencing FSCN2
     QIAGEN PyroMark CpG Assay predesigned Pyrosequencing DNA Methylation assays in human, mouse, rat FSCN2
     QIAGEN FlexiTube/FlexiPlate siRNA for gene silencing in human, mouse, rat FSCN2
     QIAGEN QuantiFast Probe-based Assays in human, mouse, rat FSCN2
     QIAGEN QuantiTect SYBR Green Assays in human, mouse, rat FSCN2
     GenScript Custom Purified and Recombinant Proteins Services for FSCN2 GenScript cDNA clones with any tag delivered in your preferred vector for FSCN2
     GenScript Custom Assay Services for FSCN2 GenScript Custom Superior Antibodies Services for FSCN2
     GenScript Custom overexpressing Cell Line Services for FSCN2 CloneReady with Over 120,000 Genes
     Gene Synthesis: Any Gene in Any Vector Vector-based siRNA and miRNA, Ready for Transfection
     Gene Mutant Library, Variants up to 10^11 Plasmid Preparation
     Custom Peptide Services
     Search for Antibodies & Assays

     Regulatory tfbs in FSCN2 promoter
     Search Chromatin IP Primers for FSCN2
     RT2 qPCR Primer Assay in human, mouse, rat FSCN2
     GNC Network for FSCN2
     SABiosciences PCR Arrays including human, mouse, rat FSCN2
     Search Tocris compounds for FSCN2
     Browse Sino Biological Proteins and Antibodies
     Browse Sino Biological cDNA Clones
     Antibodies/Proteins Production Services
     Rabbit Monoclonal Antibody Platform
     Bulk Purchasing
     Search www.enzolifesciences.com for proteins, assays, substrates, inhibitors & antibodies
     Novus Tissue Slides
     FSCN2 antibodies
     Search for Antibodies for FSCN2 at Abcam
     See all of Abcam's Antibodies, Kits and Proteins for FSCN2
     Custom Antibody / Protein Production Service
     Bulk Purchasing
     Advantages of Rabbit Monoclonal antibodies
     Abcam protocols and scientific support
     Browse ProSpec Recombinant Proteins




     FSCN2 Proteins, Antibodies, CLIAs, and ELISAs
     Search LifeMap BioReagents cell lines for FSCN2
     Gene Synthesis
     Protein Engineering
     Variant Library Synthesis
     Codon Optimization
     Protein Production and Purification
     Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for FSCN2
     Browse SwitchGear 3'UTR luciferase reporter plasmids for FSCN2
     SwitchGear Promoter luciferase reporter plasmids for FSCN2
     Search ThermoFisher Antibodies for FSCN2
     Vector BioLabs ready-to-use adenovirus/AAV for human, mouse, rat FSCN2
           
    GeneCards Homepage - Last full update: 19 Mar 2013 - Incrementals: 21 Mar 2013 , 15 Apr 2013 , 26 Apr 2013

    View Random Gene

    Category
    VWF
    (GIFTS: 73)
    von Willebrand factor
    GIFtS Group
    The GeneCards human gene database gene index: 1 3 5 6 A B C D E F G H I J K L M N O P Q R S T U V W X Y Z 


    Developed at the Crown Human Genome Center, Department of Molecular Genetics, the Weizmann Institute of Science

    Hot genes      Disease genes      FSCN2 gene at Home site.
    hostname: 356980-web2.xennexinc.com index build: 100 solr: 1.4