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Aliases for FSBP Gene

Aliases for FSBP Gene

  • Fibrinogen Silencer Binding Protein 2 3

External Ids for FSBP Gene

Summaries for FSBP Gene

GeneCards Summary for FSBP Gene

FSBP (Fibrinogen Silencer Binding Protein) is a Protein Coding gene. Among its related pathways are Homologous recombination.

UniProtKB/Swiss-Prot for FSBP Gene

  • Transcriptional repressor that down-regulates the expression of the fibrinogen gamma chain. Represses transcription of GSK3B gene promoter via its interaction with APBA1.

No data available for Entrez Gene Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for FSBP Gene

Genomics for FSBP Gene

Genomic Location for FSBP Gene

Start:
94,378,377 bp from pter
End:
94,436,952 bp from pter
Size:
58,576 bases
Orientation:
Minus strand

Genomic View for FSBP Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for FSBP Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for FSBP Gene

No data available for Regulatory Elements for FSBP Gene

Proteins for FSBP Gene

  • Protein details for FSBP Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    O95073-FSBP_HUMAN
    Recommended name:
    Fibrinogen silencer-binding protein
    Protein Accession:
    O95073
    Secondary Accessions:
    • Q8N4S5

    Protein attributes for FSBP Gene

    Size:
    299 amino acids
    Molecular mass:
    34768 Da
    Quaternary structure:
    • Interacts with APBA1 (via PDZ 1 and 2 domains).
    Miscellaneous:
    • Intragenic, in the second intron of RAB54B gene

    Alternative splice isoforms for FSBP Gene

    UniProtKB/Swiss-Prot:

neXtProt entry for FSBP Gene

Proteomics data for FSBP Gene at MOPED

Post-translational modifications for FSBP Gene

Other Protein References for FSBP Gene

ENSEMBL proteins:
REFSEQ proteins:

No data available for DME Specific Peptides for FSBP Gene

Domains for FSBP Gene

Protein Domains for FSBP Gene

InterPro:
ProtoNet:
genes like me logo Genes that share domains with FSBP: view

No data available for Gene Families and UniProtKB/Swiss-Prot for FSBP Gene

Function for FSBP Gene

Molecular function for FSBP Gene

UniProtKB/Swiss-Prot Function: Transcriptional repressor that down-regulates the expression of the fibrinogen gamma chain. Represses transcription of GSK3B gene promoter via its interaction with APBA1.

Gene Ontology (GO) - Molecular Function for FSBP Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005515 protein binding IPI 20531236
GO:0042802 identical protein binding IPI 19060904
genes like me logo Genes that share ontologies with FSBP: view

No data available for Enzyme Numbers (IUBMB) , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for FSBP Gene

Localization for FSBP Gene

Subcellular locations from UniProtKB/Swiss-Prot for FSBP Gene

Subcellular locations from

COMPARTMENTS
Jensen Localization Image for FSBP Gene COMPARTMENTS Subcellular localization image for FSBP gene
Compartment Confidence
nucleus 5

Gene Ontology (GO) - Cellular Components for FSBP Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005634 nucleus IDA 20531236
genes like me logo Genes that share ontologies with FSBP: view

Pathways for FSBP Gene

SuperPathways for FSBP Gene

Superpath Contained pathways
1 Homologous recombination
genes like me logo Genes that share pathways with FSBP: view

Pathways by source for FSBP Gene

1 BioSystems pathway for FSBP Gene

Gene Ontology (GO) - Biological Process for FSBP Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0006351 transcription, DNA-templated IEA --
GO:0006355 regulation of transcription, DNA-templated IEA --
genes like me logo Genes that share ontologies with FSBP: view

Transcripts for FSBP Gene

mRNA/cDNA for FSBP Gene

(1) REFSEQ mRNAs :
(2) Additional mRNA sequences :
(2) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for FSBP Gene

Fibrinogen silencer binding protein:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for FSBP Gene

No ASD Table

Relevant External Links for FSBP Gene

GeneLoc Exon Structure for
FSBP
ECgene alternative splicing isoforms for
FSBP

Expression for FSBP Gene

mRNA expression in normal human tissues for FSBP Gene

Integrated Proteomics: protein expression from ProteomicsDB, PaxDb, and MOPED for FSBP Gene

SOURCE GeneReport for Unigene cluster for FSBP Gene Hs.30561

mRNA Expression by UniProt/SwissProt for FSBP Gene

O95073-FSBP_HUMAN
Tissue specificity: Expressed in multiple tissues including brain.
genes like me logo Genes that share expressions with FSBP: view

Orthologs for FSBP Gene

This gene was present in the common ancestor of chordates.

Orthologs for FSBP Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia FSBP 36
  • 99.67 (n)
  • 99.67 (a)
cow
(Bos Taurus)
Mammalia FSBP 36
  • 94.98 (n)
  • 97.66 (a)
FSBP 37
  • 98 (a)
OneToOne
dog
(Canis familiaris)
Mammalia FSBP 36
  • 96.32 (n)
  • 97.32 (a)
mouse
(Mus musculus)
Mammalia Fsbp 36
  • 89.07 (n)
  • 87.96 (a)
Fsbp 37
  • 88 (a)
OneToOne
oppossum
(Monodelphis domestica)
Mammalia FSBP 37
  • 84 (a)
OneToOne
rat
(Rattus norvegicus)
Mammalia LOC102550523 36
  • 88.26 (n)
  • 86.24 (a)
chicken
(Gallus gallus)
Aves FSBP 36
  • 77.14 (n)
  • 78.38 (a)
FSBP 37
  • 78 (a)
OneToOne
lizard
(Anolis carolinensis)
Reptilia FSBP 37
  • 77 (a)
OneToOne
tropical clawed frog
(Silurana tropicalis)
Amphibia fsbp 36
  • 63.97 (n)
  • 57.91 (a)
zebrafish
(Danio rerio)
Actinopterygii LOC101884826 36
  • 59.67 (n)
  • 56.23 (a)
Species with no ortholog for FSBP:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)

Evolution for FSBP Gene

ENSEMBL:
Gene Tree for FSBP (if available)
TreeFam:
Gene Tree for FSBP (if available)

Paralogs for FSBP Gene

No data available for Paralogs for FSBP Gene

Variants for FSBP Gene

Sequence variations from dbSNP and Humsavar for FSBP Gene

SNP ID Clin Chr 08 pos Sequence Context AA Info Type MAF
VAR_019301 -

Relevant External Links for FSBP Gene

HapMap Linkage Disequilibrium report
FSBP

No data available for Structural Variations from Database of Genomic Variants (DGV) for FSBP Gene

Disorders for FSBP Gene

No disorders were found for FSBP Gene.

No data available for UniProtKB/Swiss-Prot for FSBP Gene

Publications for FSBP Gene

  1. An X11alpha/FSBP complex represses transcription of the GSK3beta gene promoter. (PMID: 20531236) Lau K.F. … Miller C.C. (NeuroReport 2010) 2 3 4
  2. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PMID: 15489334) Gerhard D.S. … Malek J. (Genome Res. 2004) 3 4
  3. An empirical framework for binary interactome mapping. (PMID: 19060904) Venkatesan K. … Vidal M. (Nat. Methods 2009) 3
  4. DNA sequence and analysis of human chromosome 8. (PMID: 16421571) Nusbaum C. … Lander E.S. (Nature 2006) 4
  5. The sequence of the human genome. (PMID: 11181995) Venter J.C. … Zhu X. (Science 2001) 3

Products for FSBP Gene

Sources for FSBP Gene

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