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Aliases for FRMPD3-AS1 Gene

Subcategory (RNA class) for FRMPD3-AS1 Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for FRMPD3-AS1 Gene

  • FRMPD3 Antisense RNA 1 2 3 5
  • FRMPD3 Antisense RNA 1 (Non-Protein Coding) 2

External Ids for FRMPD3-AS1 Gene

Previous GeneCards Identifiers for FRMPD3-AS1 Gene

  • GC00U933171
  • GC0XM106757

Summaries for FRMPD3-AS1 Gene

GeneCards Summary for FRMPD3-AS1 Gene

FRMPD3-AS1 (FRMPD3 Antisense RNA 1) is an RNA Gene, and is affiliated with the non-coding RNA class.

Additional gene information for FRMPD3-AS1 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for FRMPD3-AS1 Gene

Genomics for FRMPD3-AS1 Gene

GeneHancer (GH) Regulatory Elements for FRMPD3-AS1 Gene

Promoters and enhancers for FRMPD3-AS1 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH0XI107560 Enhancer 0.9 Ensembl ENCODE 0.4 -18.3 -18309 6.4 BCOR ZFP64 ZMYM3 RFX5 CHAMP1 RFXANK ADNP NFYB FOS ZBTB20 FRMPD3 TBC1D8B GC0XM107573 FRMPD3-AS1
GH0XI107573 Enhancer 1 Ensembl ENCODE 0.3 -28.4 -28388 2.1 FOXA2 ZBTB40 RARA TCF12 EGR1 FOS RCOR1 CREM PPARG SP1 GC0XM107573 FRMPD3-AS1 FRMPD3
GH0XI107570 Enhancer 0.7 Ensembl ENCODE 0.3 -25.7 -25679 2 FOSL1 JUND ZNF316 TRIM24 FOSL2 FOS TRIM28 GC0XM107573 FRMPD3-AS1 FRMPD3
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around FRMPD3-AS1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for FRMPD3-AS1 Gene

Genomic Locations for FRMPD3-AS1 Gene
chrX:107,512,983-107,545,821
(GRCh38/hg38)
Size:
32,839 bases
Orientation:
Minus strand
chrX:106,756,213-106,789,051
(GRCh37/hg19)

Genomic View for FRMPD3-AS1 Gene

Genes around FRMPD3-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
FRMPD3-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for FRMPD3-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for FRMPD3-AS1 Gene

Proteins for FRMPD3-AS1 Gene

Post-translational modifications for FRMPD3-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for FRMPD3-AS1 Gene

Domains & Families for FRMPD3-AS1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for FRMPD3-AS1 Gene

Function for FRMPD3-AS1 Gene

Phenotypes From GWAS Catalog for FRMPD3-AS1 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for FRMPD3-AS1 Gene

Localization for FRMPD3-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for FRMPD3-AS1 Gene

Pathways & Interactions for FRMPD3-AS1 Gene

SuperPathways for FRMPD3-AS1 Gene

No Data Available

Interacting Proteins for FRMPD3-AS1 Gene

Gene Ontology (GO) - Biological Process for FRMPD3-AS1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for FRMPD3-AS1 Gene

Drugs & Compounds for FRMPD3-AS1 Gene

No Compound Related Data Available

Transcripts for FRMPD3-AS1 Gene

mRNA/cDNA for FRMPD3-AS1 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for FRMPD3-AS1 Gene

No ASD Table

Relevant External Links for FRMPD3-AS1 Gene

GeneLoc Exon Structure for
FRMPD3-AS1
ECgene alternative splicing isoforms for
FRMPD3-AS1

Expression for FRMPD3-AS1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for FRMPD3-AS1 Gene

mRNA differential expression in normal tissues according to GTEx for FRMPD3-AS1 Gene

This gene is overexpressed in Brain - Cerebellar Hemisphere (x7.3), Brain - Cerebellum (x5.6), and Brain - Hypothalamus (x5.1).
genes like me logo Genes that share expression patterns with FRMPD3-AS1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for FRMPD3-AS1 Gene

Orthologs for FRMPD3-AS1 Gene

Evolution for FRMPD3-AS1 Gene

ENSEMBL:
Gene Tree for FRMPD3-AS1 (if available)
TreeFam:
Gene Tree for FRMPD3-AS1 (if available)

No data available for Orthologs for FRMPD3-AS1 Gene

Paralogs for FRMPD3-AS1 Gene

No data available for Paralogs for FRMPD3-AS1 Gene

Variants for FRMPD3-AS1 Gene

Sequence variations from dbSNP and Humsavar for FRMPD3-AS1 Gene

SNP ID Clin Chr 0X pos Variation AA Info Type
rs1000117109 -- 107,530,174(-) T/C intron_variant
rs1000180826 -- 107,535,501(-) C/T intron_variant
rs1000311336 -- 107,544,640(-) A/G intron_variant
rs1000324577 -- 107,528,601(-) G/A intron_variant
rs1000340592 -- 107,544,170(-) T/G intron_variant

Structural Variations from Database of Genomic Variants (DGV) for FRMPD3-AS1 Gene

Variant ID Type Subtype PubMed ID
nsv510853 CNV deletion 20534489
nsv7030 CNV insertion 18451855

Additional Variant Information for FRMPD3-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
FRMPD3-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for FRMPD3-AS1 Gene

Disorders for FRMPD3-AS1 Gene

Additional Disease Information for FRMPD3-AS1

No disorders were found for FRMPD3-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for FRMPD3-AS1 Gene

Publications for FRMPD3-AS1 Gene

No publications were found for FRMPD3-AS1 Gene.

Products for FRMPD3-AS1 Gene

Sources for FRMPD3-AS1 Gene

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