Free for academic non-profit institutions. Other users need a Commercial license

Aliases for FRMPD3-AS1 Gene

Subcategory (RNA class) for FRMPD3-AS1 Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for FRMPD3-AS1 Gene

  • FRMPD3 Antisense RNA 1 2 3 5
  • FRMPD3 Antisense RNA 1 (Non-Protein Coding) 2

External Ids for FRMPD3-AS1 Gene

Previous GeneCards Identifiers for FRMPD3-AS1 Gene

  • GC00U933171
  • GC0XM106757

Summaries for FRMPD3-AS1 Gene

GeneCards Summary for FRMPD3-AS1 Gene

FRMPD3-AS1 (FRMPD3 Antisense RNA 1) is an RNA Gene, and is affiliated with the non-coding RNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for FRMPD3-AS1 Gene

Genomics for FRMPD3-AS1 Gene

Regulatory Elements for FRMPD3-AS1 Gene

Enhancers for FRMPD3-AS1 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH0XF107560 0.5 Ensembl ENCODE 0.3 -18.3 -18309 6.4 BCOR ZFP64 TEAD4 ZMYM3 RFX5 CHAMP1 RFXANK NFYB ADNP FOS FRMPD3 TBC1D8B GC0XM107573 FRMPD3-AS1
GH0XF107573 1.2 Ensembl ENCODE 0.3 -28.4 -28388 2.1 ZBTB40 RARA FOS CREM CEBPB PPARG KLF16 CEBPA HMBOX1 SOX13 GC0XM107573 FRMPD3-AS1
GH0XF107570 0.2 ENCODE 0.3 -25.7 -25679 2.0 TBP ZNF146 ZNF280D CBX3 BHLHE40 ZNF316 JUND TRIM24 FOSL2 FOS GC0XM107573 FRMPD3-AS1
- Elite enhancer/Elite enhancer-gene association Download Table
Download GeneHancer data dump

Enhancers around FRMPD3-AS1 on UCSC Golden Path with GeneCards custom track

Genomic Location for FRMPD3-AS1 Gene

Chromosome:
X
Start:
107,512,983 bp from pter
End:
107,545,821 bp from pter
Size:
32,839 bases
Orientation:
Minus strand

Genomic View for FRMPD3-AS1 Gene

Genes around FRMPD3-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
FRMPD3-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for FRMPD3-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for FRMPD3-AS1 Gene

Proteins for FRMPD3-AS1 Gene

Post-translational modifications for FRMPD3-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for FRMPD3-AS1 Gene

Domains & Families for FRMPD3-AS1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for FRMPD3-AS1 Gene

Function for FRMPD3-AS1 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for FRMPD3-AS1 Gene

Localization for FRMPD3-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for FRMPD3-AS1 Gene

Pathways & Interactions for FRMPD3-AS1 Gene

SuperPathways for FRMPD3-AS1 Gene

No Data Available

Interacting Proteins for FRMPD3-AS1 Gene

Gene Ontology (GO) - Biological Process for FRMPD3-AS1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for FRMPD3-AS1 Gene

Transcripts for FRMPD3-AS1 Gene

mRNA/cDNA for FRMPD3-AS1 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for FRMPD3-AS1 Gene

No ASD Table

Relevant External Links for FRMPD3-AS1 Gene

GeneLoc Exon Structure for
FRMPD3-AS1
ECgene alternative splicing isoforms for
FRMPD3-AS1

Expression for FRMPD3-AS1 Gene

mRNA expression in normal human tissues for FRMPD3-AS1 Gene

mRNA differential expression in normal tissues according to GTEx for FRMPD3-AS1 Gene

This gene is overexpressed in Brain - Cerebellar Hemisphere (x7.3), Brain - Cerebellum (x5.6), and Brain - Hypothalamus (x5.1).
genes like me logo Genes that share expression patterns with FRMPD3-AS1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for FRMPD3-AS1 Gene

Orthologs for FRMPD3-AS1 Gene

Evolution for FRMPD3-AS1 Gene

ENSEMBL:
Gene Tree for FRMPD3-AS1 (if available)
TreeFam:
Gene Tree for FRMPD3-AS1 (if available)

No data available for Orthologs for FRMPD3-AS1 Gene

Paralogs for FRMPD3-AS1 Gene

No data available for Paralogs for FRMPD3-AS1 Gene

Variants for FRMPD3-AS1 Gene

Sequence variations from dbSNP and Humsavar for FRMPD3-AS1 Gene

SNP ID Clin Chr 0X pos Sequence Context AA Info Type
rs111233223 -- 107,546,939(+) TCTCC(A/G)TTTCC intron-variant, upstream-variant-2KB
rs111267424 -- 107,539,028(+) AGTCA(C/T)TTCTG intron-variant
rs111370770 -- 107,518,500(+) ATTCA(C/T)CAATA intron-variant
rs111515805 -- 107,524,559(+) ATACA(A/G)TTATT intron-variant, upstream-variant-2KB
rs111596646 -- 107,535,750(+) CACAA(C/T)GTATG intron-variant

Structural Variations from Database of Genomic Variants (DGV) for FRMPD3-AS1 Gene

Variant ID Type Subtype PubMed ID
nsv510853 CNV deletion 20534489
nsv7030 CNV insertion 18451855

Relevant External Links for FRMPD3-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
FRMPD3-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for FRMPD3-AS1 Gene

Disorders for FRMPD3-AS1 Gene

Relevant External Links for FRMPD3-AS1

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
FRMPD3-AS1

No disorders were found for FRMPD3-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for FRMPD3-AS1 Gene

Publications for FRMPD3-AS1 Gene

No publications were found for FRMPD3-AS1 Gene.

Products for FRMPD3-AS1 Gene

Sources for FRMPD3-AS1 Gene

Content
Loading form....