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Aliases for FRMD8P1 Gene

Aliases for FRMD8P1 Gene

  • FERM Domain Containing 8 Pseudogene 1 2 3 5
  • Putative FERM Domain-Containing Protein FRMD8P1 3
  • FERM Domain-Containing Protein 8 Pseudogene 3
  • FERM Domain-Containing 8 Pseudogene 1 4
  • FKSG43 3

External Ids for FRMD8P1 Gene

Previous GeneCards Identifiers for FRMD8P1 Gene

  • GC0XM064772

Summaries for FRMD8P1 Gene

GeneCards Summary for FRMD8P1 Gene

FRMD8P1 (FERM Domain Containing 8 Pseudogene 1) is a Pseudogene.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for FRMD8P1 Gene

Genomics for FRMD8P1 Gene

Regulatory Elements for FRMD8P1 Gene

Enhancers for FRMD8P1 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH0XG065581 1.1 Ensembl ENCODE 0.3 -29.8 -29814 1.1 CTCF KLF1 NFRKB RAD21 RFX5 ZFHX2 EGR1 NCOR1 ZNF143 SMC3 MSN FRMD8P1
GH0XG065536 0.4 ENCODE 0.4 +15.9 15926 0.2 RFX1 LAS1L FRMD8P1
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around FRMD8P1 on UCSC Golden Path with GeneCards custom track

Genomic Location for FRMD8P1 Gene

Chromosome:
X
Start:
65,550,622 bp from pter
End:
65,552,421 bp from pter
Size:
1,800 bases
Orientation:
Minus strand

Genomic View for FRMD8P1 Gene

Genes around FRMD8P1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
FRMD8P1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for FRMD8P1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for FRMD8P1 Gene

Proteins for FRMD8P1 Gene

  • Protein details for FRMD8P1 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q9BZ68-FR8P1_HUMAN
    Recommended name:
    Putative FERM domain-containing protein FRMD8P1
    Protein Accession:
    Q9BZ68
    Secondary Accessions:
    • A1A4X4

    Protein attributes for FRMD8P1 Gene

    Size:
    369 amino acids
    Molecular mass:
    41136 Da
    Quaternary structure:
    No Data Available
    SequenceCaution:
    • Sequence=AAG50294.1; Type=Erroneous termination; Positions=370; Note=Translated as stop.; Evidence={ECO:0000305};

neXtProt entry for FRMD8P1 Gene

Post-translational modifications for FRMD8P1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for FRMD8P1 Gene

Domains & Families for FRMD8P1 Gene

Protein Domains for FRMD8P1 Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with FRMD8P1: view

No data available for Gene Families , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for FRMD8P1 Gene

Function for FRMD8P1 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for FRMD8P1 Gene

Localization for FRMD8P1 Gene

Gene Ontology (GO) - Cellular Components for FRMD8P1 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005856 cytoskeleton IEA --
genes like me logo Genes that share ontologies with FRMD8P1: view

No data available for Subcellular locations from UniProtKB/Swiss-Prot and Subcellular locations from COMPARTMENTS for FRMD8P1 Gene

Pathways & Interactions for FRMD8P1 Gene

SuperPathways for FRMD8P1 Gene

No Data Available

Interacting Proteins for FRMD8P1 Gene

Gene Ontology (GO) - Biological Process for FRMD8P1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for FRMD8P1 Gene

Drugs & Compounds for FRMD8P1 Gene

No Compound Related Data Available

Transcripts for FRMD8P1 Gene

mRNA/cDNA for FRMD8P1 Gene

(3) Selected AceView cDNA sequences:
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for FRMD8P1 Gene

No ASD Table

Relevant External Links for FRMD8P1 Gene

GeneLoc Exon Structure for
FRMD8P1
ECgene alternative splicing isoforms for
FRMD8P1

Expression for FRMD8P1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for FRMD8P1 Gene

Protein differential expression in normal tissues from HIPED for FRMD8P1 Gene

This gene is overexpressed in Peripheral blood mononuclear cells (65.3).

Integrated Proteomics: protein expression in normal tissues and cell lines from ProteomicsDB and MOPED for FRMD8P1 Gene



Protein tissue co-expression partners for FRMD8P1 Gene

NURSA nuclear receptor signaling pathways regulating expression of FRMD8P1 Gene:

FRMD8P1

SOURCE GeneReport for Unigene cluster for FRMD8P1 Gene:

Hs.652967
genes like me logo Genes that share expression patterns with FRMD8P1: view

Primer Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for FRMD8P1 Gene

Orthologs for FRMD8P1 Gene

Evolution for FRMD8P1 Gene

ENSEMBL:
Gene Tree for FRMD8P1 (if available)
TreeFam:
Gene Tree for FRMD8P1 (if available)

No data available for Orthologs for FRMD8P1 Gene

Paralogs for FRMD8P1 Gene

(1) SIMAP similar genes for FRMD8P1 Gene using alignment to 1 proteins:

genes like me logo Genes that share paralogs with FRMD8P1: view

No data available for Paralogs for FRMD8P1 Gene

Variants for FRMD8P1 Gene

Sequence variations from dbSNP and Humsavar for FRMD8P1 Gene

SNP ID Clin Chr 0X pos Sequence Context AA Info Type
rs1000299561 -- 65,552,389(+) CCCAG(A/G)CTGGA nc-transcript-variant
rs1004455846 -- 65,554,386(+) TATGC(C/T)CTGGA upstream-variant-2KB
rs1005568825 -- 65,552,434(+) TGCCT(C/T)TCTGG upstream-variant-2KB
rs1006375902 -- 65,551,873(+) TCGTC(A/G)GGGAT nc-transcript-variant
rs1006447948 -- 65,551,541(+) GGGTG(C/T)CCAGG nc-transcript-variant

Structural Variations from Database of Genomic Variants (DGV) for FRMD8P1 Gene

Variant ID Type Subtype PubMed ID
esv1584074 OTHER inversion 17803354

Relevant External Links for FRMD8P1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
FRMD8P1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for FRMD8P1 Gene

Disorders for FRMD8P1 Gene

Relevant External Links for FRMD8P1

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
FRMD8P1

No disorders were found for FRMD8P1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for FRMD8P1 Gene

Publications for FRMD8P1 Gene

  1. The BioPlex Network: A Systematic Exploration of the Human Interactome. (PMID: 26186194) Huttlin E.L. … Gygi S.P. (Cell 2015) 3 64
  2. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PMID: 15489334) Gerhard D.S. … Malek J. (Genome Res. 2004) 4 64
  3. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 3 64

Products for FRMD8P1 Gene

Sources for FRMD8P1 Gene

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