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Aliases for FRMD8 Gene

Aliases for FRMD8 Gene

  • FERM Domain Containing 8 2 3 5
  • FKSG44 3

External Ids for FRMD8 Gene

Previous GeneCards Identifiers for FRMD8 Gene

  • GC11P064911
  • GC11P065154
  • GC11P061480

Summaries for FRMD8 Gene

GeneCards Summary for FRMD8 Gene

FRMD8 (FERM Domain Containing 8) is a Protein Coding gene. An important paralog of this gene is KRIT1.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for FRMD8 Gene

Genomics for FRMD8 Gene

Regulatory Elements for FRMD8 Gene

Promoters for FRMD8 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters

ENSRs around FRMD8 on UCSC Golden Path with GeneCards custom track

Genomic Location for FRMD8 Gene

Chromosome:
11
Start:
65,386,570 bp from pter
End:
65,413,525 bp from pter
Size:
26,956 bases
Orientation:
Plus strand

Genomic View for FRMD8 Gene

Genes around FRMD8 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
FRMD8 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for FRMD8 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for FRMD8 Gene

Proteins for FRMD8 Gene

  • Protein details for FRMD8 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q9BZ67-FRMD8_HUMAN
    Recommended name:
    FERM domain-containing protein 8
    Protein Accession:
    Q9BZ67
    Secondary Accessions:
    • B4E2P1
    • Q86V56
    • Q8NCB5

    Protein attributes for FRMD8 Gene

    Size:
    464 amino acids
    Molecular mass:
    51218 Da
    Quaternary structure:
    No Data Available

    Alternative splice isoforms for FRMD8 Gene

    UniProtKB/Swiss-Prot:

neXtProt entry for FRMD8 Gene

Proteomics data for FRMD8 Gene at MOPED

Post-translational modifications for FRMD8 Gene

  • Modification sites at PhosphoSitePlus
  • Modification sites at neXtProt

No data available for DME Specific Peptides for FRMD8 Gene

Domains & Families for FRMD8 Gene

Protein Domains for FRMD8 Gene

Suggested Antigen Peptide Sequences for FRMD8 Gene

Graphical View of Domain Structure for InterPro Entry

Q9BZ67

UniProtKB/Swiss-Prot:

FRMD8_HUMAN :
  • Contains 1 FERM domain.
Domain:
  • Contains 1 FERM domain.
genes like me logo Genes that share domains with FRMD8: view

No data available for Gene Families for FRMD8 Gene

Function for FRMD8 Gene

genes like me logo Genes that share phenotypes with FRMD8: view

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Animal Models , Transcription Factor Targets and HOMER Transcription for FRMD8 Gene

Localization for FRMD8 Gene

Subcellular locations from

COMPARTMENTS
Jensen Localization Image for FRMD8 Gene COMPARTMENTS Subcellular localization image for FRMD8 gene
Compartment Confidence
cytosol 3
cytoskeleton 2
nucleus 2
extracellular 1
mitochondrion 1
peroxisome 1
plasma membrane 1

No data available for Subcellular locations from UniProtKB/Swiss-Prot and Gene Ontology (GO) - Cellular Components for FRMD8 Gene

Pathways & Interactions for FRMD8 Gene

SuperPathways for FRMD8 Gene

No Data Available

Gene Ontology (GO) - Biological Process for FRMD8 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for FRMD8 Gene

Drugs & Compounds for FRMD8 Gene

No Compound Related Data Available

Transcripts for FRMD8 Gene

Unigene Clusters for FRMD8 Gene

FERM domain containing 8:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for FRMD8 Gene

No ASD Table

Relevant External Links for FRMD8 Gene

GeneLoc Exon Structure for
FRMD8
ECgene alternative splicing isoforms for
FRMD8

Expression for FRMD8 Gene

mRNA expression in normal human tissues for FRMD8 Gene

mRNA expression in embryonic tissues and stem cells from LifeMap Discovery

Protein differential expression in normal tissues from HIPED for FRMD8 Gene

This gene is overexpressed in Serum (31.5).

Integrated Proteomics: protein expression in normal tissues and cell lines from ProteomicsDB, PaxDb, MOPED, and MaxQB for FRMD8 Gene



SOURCE GeneReport for Unigene cluster for FRMD8 Gene Hs.578433

genes like me logo Genes that share expression patterns with FRMD8: view

Protein tissue co-expression partners for FRMD8 Gene

Primer Products

In Situ Assay Products

No data available for mRNA differential expression in normal tissues and mRNA Expression by UniProt/SwissProt for FRMD8 Gene

Orthologs for FRMD8 Gene

This gene was present in the common ancestor of animals.

Orthologs for FRMD8 Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia FRMD8 35
  • 99.35 (n)
  • 99.57 (a)
cow
(Bos Taurus)
Mammalia FRMD8 35
  • 88.46 (n)
  • 88.31 (a)
FRMD8 36
  • 88 (a)
OneToOne
dog
(Canis familiaris)
Mammalia FRMD8 36
  • 87 (a)
OneToOne
FRMD8 35
  • 87.04 (n)
  • 86.83 (a)
mouse
(Mus musculus)
Mammalia Frmd8 36
  • 87 (a)
OneToOne
Frmd8 16
Frmd8 35
  • 84.59 (n)
  • 88.12 (a)
oppossum
(Monodelphis domestica)
Mammalia FRMD8 36
  • 72 (a)
OneToOne
platypus
(Ornithorhynchus anatinus)
Mammalia FRMD8 36
  • 67 (a)
OneToOne
rat
(Rattus norvegicus)
Mammalia Frmd8 35
  • 84.48 (n)
  • 87.07 (a)
lizard
(Anolis carolinensis)
Reptilia FRMD8 36
  • 63 (a)
OneToOne
African clawed frog
(Xenopus laevis)
Amphibia MGC53754 35
tropical clawed frog
(Silurana tropicalis)
Amphibia frmd8 35
  • 60.46 (n)
  • 61.43 (a)
zebrafish
(Danio rerio)
Actinopterygii frmd8 36
  • 52 (a)
OneToOne
frmd8 35
  • 59.46 (n)
  • 57.93 (a)
African malaria mosquito
(Anopheles gambiae)
Insecta AgaP_AGAP002678 35
  • 49.96 (n)
  • 34.99 (a)
fruit fly
(Drosophila melanogaster)
Insecta Bili 35
  • 49.25 (n)
  • 40.07 (a)
Bili 36
  • 15 (a)
OneToOne
worm
(Caenorhabditis elegans)
Secernentea frm-10 36
  • 16 (a)
OneToOne
sea squirt
(Ciona savignyi)
Ascidiacea -- 36
  • 33 (a)
OneToOne
Species with no ortholog for FRMD8:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • wheat (Triticum aestivum)

Evolution for FRMD8 Gene

ENSEMBL:
Gene Tree for FRMD8 (if available)
TreeFam:
Gene Tree for FRMD8 (if available)

Paralogs for FRMD8 Gene

Paralogs for FRMD8 Gene

(1) SIMAP similar genes for FRMD8 Gene using alignment to 6 proteins:

Pseudogenes.org Pseudogenes for FRMD8 Gene

genes like me logo Genes that share paralogs with FRMD8: view

Variants for FRMD8 Gene

Sequence variations from dbSNP and Humsavar for FRMD8 Gene

SNP ID Clin Chr 11 pos Sequence Context AA Info Type
rs478121 -- 65,410,279(+) GATCA(C/T)GAGGT intron-variant
rs651283 -- 65,387,713(+) ttttg(C/T)atttt intron-variant
rs666194 -- 65,391,911(-) AAGGC(A/G)CAGTG intron-variant
rs874374 -- 65,389,861(+) TTGCC(A/C)CAACC intron-variant
rs668117 -- 65,389,165(+) TAGCA(C/T)TCGTG intron-variant

Structural Variations from Database of Genomic Variants (DGV) for FRMD8 Gene

Variant ID Type Subtype PubMed ID
nsv526181 CNV Gain 19592680
esv2422285 CNV Deletion 17116639
dgv1175n71 CNV Loss 21882294
nsv897717 CNV Loss 21882294
nsv897718 CNV Loss 21882294
nsv897719 CNV Loss 21882294

Variation tolerance for FRMD8 Gene

Residual Variation Intolerance Score: 66.7% of all genes are more intolerant (likely to be disease-causing)
Gene Damage Index Score: 2.81; 47.63% of all genes are more intolerant (likely to be disease-causing)

Relevant External Links for FRMD8 Gene

HapMap Linkage Disequilibrium report
FRMD8

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for FRMD8 Gene

Disorders for FRMD8 Gene

Relevant External Links for FRMD8

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
FRMD8

No disorders were found for FRMD8 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for FRMD8 Gene

Publications for FRMD8 Gene

  1. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 3 4 67
  2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 2 3
  3. The BioPlex Network: A Systematic Exploration of the Human Interactome. (PMID: 26186194) Huttlin E.L. … Gygi S.P. (Cell 2015) 3
  4. Genome-wide association study identifies three novel susceptibility loci for severe Acne vulgaris. (PMID: 24927181) Navarini A.A. … Barker J.N. (Nat Commun 2014) 3
  5. A proteome-scale map of the human interactome network. (PMID: 25416956) Rolland T. … Vidal M. (Cell 2014) 3

Products for FRMD8 Gene

Sources for FRMD8 Gene

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