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Aliases for FRMD6-AS1 Gene

Subcategory (RNA class) for FRMD6-AS1 Gene

antisense

Quality Score for this RNA gene is

3

Aliases for FRMD6-AS1 Gene

  • FRMD6 Antisense RNA 1 2 3 4 5
  • FRMD6 Antisense RNA 1 (Non-Protein Coding) 2 3
  • C14orf82 3 4
  • Chromosome 14 Open Reading Frame 82 2
  • FRMD6 Antisense Gene Protein 1 4

External Ids for FRMD6-AS1 Gene

ORGUL Members for FRMD6-AS1 Gene

Previous HGNC Symbols for FRMD6-AS1 Gene

  • C14orf82

Previous GeneCards Identifiers for FRMD6-AS1 Gene

  • GC14M052117

Summaries for FRMD6-AS1 Gene

GeneCards Summary for FRMD6-AS1 Gene

FRMD6-AS1 (FRMD6 Antisense RNA 1) is an RNA Gene, and is affiliated with the antisense RNA class.

Additional gene information for FRMD6-AS1 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for FRMD6-AS1 Gene

Genomics for FRMD6-AS1 Gene

GeneHancer (GH) Regulatory Elements for FRMD6-AS1 Gene

Promoters and enhancers for FRMD6-AS1 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH14I051649 Promoter/Enhancer 2.5 EPDnew FANTOM5 Ensembl ENCODE dbSUPER 550.8 -1.2 -1186 6.6 ARID4B SIN3A GLI4 BRCA1 ZNF48 GLIS2 ZNF213 ZNF207 ZNF143 ATF7 FRMD6 FRMD6-AS1 TMX1 GNG2 RNU6-301P RNA5SP385
GH14I051648 Enhancer 0.5 Ensembl dbSUPER 0.8 +3.1 3143 0.4 PRDM6 RNU6-301P FRMD6-AS1 ENSG00000277050 FRMD6
GH14I051644 Enhancer 0.8 FANTOM5 dbSUPER 0.4 +7.6 7551 0.3 HIC1 ZNF148 PKNOX1 ZSCAN4 SALL2 ZNF398 TRIM9 GPR137C RNU6-301P FRMD6 FRMD6-AS1 ENSG00000277050
GH14I051673 Enhancer 0.9 ENCODE dbSUPER 0.3 -24.0 -23999 4.8 SOX13 FOXA2 ZNF384 CEBPG POLR2A SCRT2 SOX5 TEAD1 HLF FOXA3 RNU6-301P PYGL RNA5SP385 FRMD6-AS1 FRMD6
GH14I051657 Enhancer 0.5 dbSUPER 0.4 -6.7 -6678 2.8 GATA3 JUND PRDM6 MAFK PYGL FRMD6-AS1 RNA5SP385 FRMD6
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around FRMD6-AS1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for FRMD6-AS1 Gene

Genomic Locations for FRMD6-AS1 Gene
chr14:51,649,516-51,651,744
(GRCh38/hg38)
Size:
2,229 bases
Orientation:
Minus strand
chr14:52,116,234-52,118,462
(GRCh37/hg19)

Genomic View for FRMD6-AS1 Gene

Genes around FRMD6-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
FRMD6-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for FRMD6-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for FRMD6-AS1 Gene

Proteins for FRMD6-AS1 Gene

  • Protein details for FRMD6-AS1 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    P0C7T7-FMAS1_HUMAN
    Recommended name:
    Putative uncharacterized protein FRMD6-AS1
    Protein Accession:
    P0C7T7

    Protein attributes for FRMD6-AS1 Gene

    Size:
    363 amino acids
    Molecular mass:
    38799 Da
    Quaternary structure:
    No Data Available

neXtProt entry for FRMD6-AS1 Gene

Post-translational modifications for FRMD6-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for FRMD6-AS1 Gene

Domains & Families for FRMD6-AS1 Gene

Protein Domains for FRMD6-AS1 Gene

ProtoNet:

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with FRMD6-AS1: view

No data available for Gene Families , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for FRMD6-AS1 Gene

Function for FRMD6-AS1 Gene

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for FRMD6-AS1 Gene

Localization for FRMD6-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for FRMD6-AS1 Gene

Pathways & Interactions for FRMD6-AS1 Gene

SuperPathways for FRMD6-AS1 Gene

No Data Available

Interacting Proteins for FRMD6-AS1 Gene

Gene Ontology (GO) - Biological Process for FRMD6-AS1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for FRMD6-AS1 Gene

Drugs & Compounds for FRMD6-AS1 Gene

No Compound Related Data Available

Transcripts for FRMD6-AS1 Gene

mRNA/cDNA for FRMD6-AS1 Gene

(2) Additional mRNA sequences :
(13) Selected AceView cDNA sequences:
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for FRMD6-AS1 Gene

FRMD6 antisense RNA 1:
Representative Sequences:

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for FRMD6-AS1 Gene

No ASD Table

Relevant External Links for FRMD6-AS1 Gene

GeneLoc Exon Structure for
FRMD6-AS1
ECgene alternative splicing isoforms for
FRMD6-AS1

Expression for FRMD6-AS1 Gene

Integrated Proteomics: protein expression in normal tissues and cell lines from ProteomicsDB and MOPED for FRMD6-AS1 Gene



Protein tissue co-expression partners for FRMD6-AS1 Gene

SOURCE GeneReport for Unigene cluster for FRMD6-AS1 Gene:

Hs.645410

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for FRMD6-AS1 Gene

Orthologs for FRMD6-AS1 Gene

Evolution for FRMD6-AS1 Gene

ENSEMBL:
Gene Tree for FRMD6-AS1 (if available)
TreeFam:
Gene Tree for FRMD6-AS1 (if available)

No data available for Orthologs for FRMD6-AS1 Gene

Paralogs for FRMD6-AS1 Gene

No data available for Paralogs for FRMD6-AS1 Gene

Variants for FRMD6-AS1 Gene

Sequence variations from dbSNP and Humsavar for FRMD6-AS1 Gene

SNP ID Clin Chr 14 pos Variation AA Info Type
rs1000627388 -- 51,653,027(-) T/C upstream_transcript_variant
rs1000676824 -- 51,653,226(-) C/T upstream_transcript_variant
rs1000691183 -- 51,650,081(-) T/C non_coding_transcript_variant
rs1001468827 -- 51,650,620(-) C/T non_coding_transcript_variant
rs1001577980 -- 51,652,478(-) C/T upstream_transcript_variant

Additional Variant Information for FRMD6-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
FRMD6-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for FRMD6-AS1 Gene

Disorders for FRMD6-AS1 Gene

Additional Disease Information for FRMD6-AS1

No disorders were found for FRMD6-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for FRMD6-AS1 Gene

Publications for FRMD6-AS1 Gene

  1. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T … Sugano S (Nature genetics 2004) 3 4 58
  2. The DNA sequence and analysis of human chromosome 14. (PMID: 12508121) Heilig R … Weissenbach J (Nature 2003) 4 58
  3. The sequence of the human genome. (PMID: 11181995) Venter JC … Zhu X (Science (New York, N.Y.) 2001) 3 58

Products for FRMD6-AS1 Gene

Sources for FRMD6-AS1 Gene

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