Free for academic non-profit institutions. Other users need a Commercial license

Aliases for FRMD6-AS1 Gene

Subcategory (RNA class) for FRMD6-AS1 Gene

antisense

Quality Score for this RNA gene is

3

Aliases for FRMD6-AS1 Gene

  • FRMD6 Antisense RNA 1 2 3 4 5
  • FRMD6 Antisense RNA 1 (Non-Protein Coding) 2 3
  • C14orf82 3 4
  • Chromosome 14 Open Reading Frame 82 2
  • FRMD6 Antisense Gene Protein 1 4

External Ids for FRMD6-AS1 Gene

ORGUL Members for FRMD6-AS1 Gene

Previous HGNC Symbols for FRMD6-AS1 Gene

  • C14orf82

Previous GeneCards Identifiers for FRMD6-AS1 Gene

  • GC14M052117

Summaries for FRMD6-AS1 Gene

GeneCards Summary for FRMD6-AS1 Gene

FRMD6-AS1 (FRMD6 Antisense RNA 1) is an RNA Gene, and is affiliated with the antisense RNA class.

Additional gene information for FRMD6-AS1 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for FRMD6-AS1 Gene

Genomics for FRMD6-AS1 Gene

Regulatory Elements for FRMD6-AS1 Gene

Enhancers for FRMD6-AS1 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH14H051649 1.7 FANTOM5 ENCODE dbSUPER 0.7 -1.2 -1187 6 ARID4B SIN3A GLI4 BRCA1 GLIS2 ZNF143 ZNF207 ATF7 SP3 SP5 TMX1 GNG2 RNU6-301P FRMD6 FRMD6-AS1 RNA5SP385
GH14H051648 0.6 Ensembl dbSUPER 0.7 +3.1 3144 0 PRDM6 RNU6-301P FRMD6-AS1 ENSG00000277050
GH14H051644 0.9 FANTOM5 dbSUPER 0.4 +7.6 7552 0 HIC1 ZNF148 PKNOX1 ZSCAN4 SALL2 ZNF398 TRIM9 GPR137C RNU6-301P FRMD6 ENSG00000277050 FRMD6-AS1
GH14H051673 1 ENCODE dbSUPER 0.3 -24.0 -24000 4 SOX13 FOXA2 CEBPG ZNF384 POLR2A SCRT2 MAFK SOX5 TEAD1 FOXA3 RNU6-301P PYGL RNA5SP385 FRMD6-AS1
GH14H051642 0.5 ENCODE dbSUPER 0.4 +8.4 8408 1 FRMD6-AS1 ENSG00000277050
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around FRMD6-AS1 on UCSC Golden Path with GeneCards custom track

Promoters for FRMD6-AS1 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters
ENSR00000068314 -556 4201 ARID4B SIN3A GLI4 BRCA1 GLIS2 ZNF143 ZNF207 ATF7 SP3 SP5

Genomic Location for FRMD6-AS1 Gene

Chromosome:
14
Start:
51,649,516 bp from pter
End:
51,651,744 bp from pter
Size:
2,229 bases
Orientation:
Minus strand

Genomic View for FRMD6-AS1 Gene

Genes around FRMD6-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
FRMD6-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for FRMD6-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for FRMD6-AS1 Gene

Proteins for FRMD6-AS1 Gene

  • Protein details for FRMD6-AS1 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    P0C7T7-FMAS1_HUMAN
    Recommended name:
    Putative uncharacterized protein FRMD6-AS1
    Protein Accession:
    P0C7T7

    Protein attributes for FRMD6-AS1 Gene

    Size:
    363 amino acids
    Molecular mass:
    38799 Da
    Quaternary structure:
    No Data Available

neXtProt entry for FRMD6-AS1 Gene

Post-translational modifications for FRMD6-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for FRMD6-AS1 Gene

Domains & Families for FRMD6-AS1 Gene

Protein Domains for FRMD6-AS1 Gene

ProtoNet:

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with FRMD6-AS1: view

No data available for Gene Families , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for FRMD6-AS1 Gene

Function for FRMD6-AS1 Gene

Animal Model Products

CRISPR Products

Clone Products

  • Applied Biological Materials Clones for FRMD6-AS1
  • Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for FRMD6-AS1 Gene

Localization for FRMD6-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for FRMD6-AS1 Gene

Pathways & Interactions for FRMD6-AS1 Gene

SuperPathways for FRMD6-AS1 Gene

No Data Available

Interacting Proteins for FRMD6-AS1 Gene

Gene Ontology (GO) - Biological Process for FRMD6-AS1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for FRMD6-AS1 Gene

Drugs & Compounds for FRMD6-AS1 Gene

No Compound Related Data Available

Transcripts for FRMD6-AS1 Gene

mRNA/cDNA for FRMD6-AS1 Gene

(2) Additional mRNA sequences :
(13) Selected AceView cDNA sequences:
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for FRMD6-AS1 Gene

FRMD6 antisense RNA 1:
Representative Sequences:

CRISPR Products

Clone Products

  • Applied Biological Materials Clones for FRMD6-AS1
  • Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more

Alternative Splicing Database (ASD) splice patterns (SP) for FRMD6-AS1 Gene

No ASD Table

Relevant External Links for FRMD6-AS1 Gene

GeneLoc Exon Structure for
FRMD6-AS1
ECgene alternative splicing isoforms for
FRMD6-AS1

Expression for FRMD6-AS1 Gene

Integrated Proteomics: protein expression in normal tissues and cell lines from ProteomicsDB and MOPED for FRMD6-AS1 Gene



Protein tissue co-expression partners for FRMD6-AS1 Gene

SOURCE GeneReport for Unigene cluster for FRMD6-AS1 Gene:

Hs.645410

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for FRMD6-AS1 Gene

Orthologs for FRMD6-AS1 Gene

Evolution for FRMD6-AS1 Gene

ENSEMBL:
Gene Tree for FRMD6-AS1 (if available)
TreeFam:
Gene Tree for FRMD6-AS1 (if available)

No data available for Orthologs for FRMD6-AS1 Gene

Paralogs for FRMD6-AS1 Gene

No data available for Paralogs for FRMD6-AS1 Gene

Variants for FRMD6-AS1 Gene

Sequence variations from dbSNP and Humsavar for FRMD6-AS1 Gene

SNP ID Clin Chr 14 pos Sequence Context AA Info Type
rs1000627388 -- 51,653,027(+) CCTTT(C/T)CATTT intron-variant, upstream-variant-2KB
rs1000676824 -- 51,653,226(+) TTCTT(C/T)TCTGG intron-variant, upstream-variant-2KB
rs1000691183 -- 51,650,081(+) TGTTC(C/T)CTTTT intron-variant, nc-transcript-variant, upstream-variant-2KB
rs1001468827 -- 51,650,620(+) TCGAT(C/T)TCCTG intron-variant, nc-transcript-variant, upstream-variant-2KB
rs1001577980 -- 51,652,478(+) GGCGC(C/T)GGGAC intron-variant, upstream-variant-2KB

Relevant External Links for FRMD6-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
FRMD6-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for FRMD6-AS1 Gene

Disorders for FRMD6-AS1 Gene

Relevant External Links for FRMD6-AS1

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
FRMD6-AS1

No disorders were found for FRMD6-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for FRMD6-AS1 Gene

Publications for FRMD6-AS1 Gene

  1. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T … Sugano S (Nature genetics 2004) 3 4 60
  2. The DNA sequence and analysis of human chromosome 14. (PMID: 12508121) Heilig R … Weissenbach J (Nature 2003) 4 60
  3. The sequence of the human genome. (PMID: 11181995) Venter JC … Zhu X (Science (New York, N.Y.) 2001) 3 60

Products for FRMD6-AS1 Gene

Sources for FRMD6-AS1 Gene

Content
Loading form....