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Aliases for FREM2-AS1 Gene

Subcategory (RNA class) for FREM2-AS1 Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for FREM2-AS1 Gene

  • FREM2 Antisense RNA 1 2 3 5
  • FREM2 Antisense RNA 1 (Non-Protein Coding) 2

External Ids for FREM2-AS1 Gene

Previous GeneCards Identifiers for FREM2-AS1 Gene

  • GC00U933492
  • GC13M039396

Summaries for FREM2-AS1 Gene

GeneCards Summary for FREM2-AS1 Gene

FREM2-AS1 (FREM2 Antisense RNA 1) is an RNA Gene, and is affiliated with the non-coding RNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for FREM2-AS1 Gene

Genomics for FREM2-AS1 Gene

Regulatory Elements for FREM2-AS1 Gene

Enhancers for FREM2-AS1 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH13F038804 0.5 ENCODE 11 +26.1 26077 0.2 JUNB RNU6-56P FREM2-AS1
GH13F038783 0.6 ENCODE 10.8 +46.4 46425 0.9 FREM2-AS1 RNU6-56P
GH13F038786 0.5 ENCODE 10.8 +45.6 45637 0.2 FREM2-AS1 RNU6-56P
GH13F038878 0.4 ENCODE 10.6 -48.4 -48359 1.8 ZNF341 MAFK ZBTB17 NR2F2 FREM2-AS1 GC13M038877 GC13M038879
GH13F038735 0.7 ENCODE 9.9 +95.0 95017 0.2 ZNF263 GATA3 TRIM28 FREM2-AS1 GC13M038666 FREM2
- Elite enhancer/Elite enhancer-gene association Download Table
Download GeneHancer data dump

Enhancers around FREM2-AS1 on UCSC Golden Path with GeneCards custom track

Genomic Location for FREM2-AS1 Gene

Chromosome:
13
Start:
38,821,798 bp from pter
End:
38,830,835 bp from pter
Size:
9,038 bases
Orientation:
Minus strand

Genomic View for FREM2-AS1 Gene

Genes around FREM2-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
FREM2-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for FREM2-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for FREM2-AS1 Gene

Proteins for FREM2-AS1 Gene

Post-translational modifications for FREM2-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for FREM2-AS1 Gene

Domains & Families for FREM2-AS1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for FREM2-AS1 Gene

Function for FREM2-AS1 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for FREM2-AS1 Gene

Localization for FREM2-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for FREM2-AS1 Gene

Pathways & Interactions for FREM2-AS1 Gene

SuperPathways for FREM2-AS1 Gene

No Data Available

Interacting Proteins for FREM2-AS1 Gene

Gene Ontology (GO) - Biological Process for FREM2-AS1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for FREM2-AS1 Gene

Transcripts for FREM2-AS1 Gene

mRNA/cDNA for FREM2-AS1 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for FREM2-AS1 Gene

No ASD Table

Relevant External Links for FREM2-AS1 Gene

GeneLoc Exon Structure for
FREM2-AS1
ECgene alternative splicing isoforms for
FREM2-AS1

Expression for FREM2-AS1 Gene

mRNA expression in normal human tissues for FREM2-AS1 Gene

mRNA differential expression in normal tissues according to GTEx for FREM2-AS1 Gene

This gene is overexpressed in Pancreas (x51.4).
genes like me logo Genes that share expression patterns with FREM2-AS1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for FREM2-AS1 Gene

Orthologs for FREM2-AS1 Gene

Evolution for FREM2-AS1 Gene

ENSEMBL:
Gene Tree for FREM2-AS1 (if available)
TreeFam:
Gene Tree for FREM2-AS1 (if available)

No data available for Orthologs for FREM2-AS1 Gene

Paralogs for FREM2-AS1 Gene

No data available for Paralogs for FREM2-AS1 Gene

Variants for FREM2-AS1 Gene

Sequence variations from dbSNP and Humsavar for FREM2-AS1 Gene

SNP ID Clin Chr 13 pos Sequence Context AA Info Type
rs10162041 -- 38,830,210(+) TACCA(C/G)AAATC intron-variant, upstream-variant-2KB
rs111285594 -- 38,826,338(+) ATTTC(A/G)TAAGT intron-variant
rs111816126 -- 38,825,837(+) TTTCA(C/T)TCTAG intron-variant
rs111894822 -- 38,827,350(+) TAAAT(A/G)TAGCG intron-variant
rs112326859 -- 38,822,870(+) GAAAC(-/GAAGGAAAC)TTCAT intron-variant

Relevant External Links for FREM2-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
FREM2-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for FREM2-AS1 Gene

Disorders for FREM2-AS1 Gene

No disorders were found for FREM2-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for FREM2-AS1 Gene

Publications for FREM2-AS1 Gene

No publications were found for FREM2-AS1 Gene.

Products for FREM2-AS1 Gene

Sources for FREM2-AS1 Gene

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