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Aliases for FOXP1-AS1 Gene

Subcategory (RNA class) for FOXP1-AS1 Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for FOXP1-AS1 Gene

  • FOXP1 Antisense RNA 1 2 3 5
  • FOXP1 Antisense RNA 1 (Non-Protein Coding) 2

External Ids for FOXP1-AS1 Gene

Previous GeneCards Identifiers for FOXP1-AS1 Gene

  • GC00U933113

Summaries for FOXP1-AS1 Gene

GeneCards Summary for FOXP1-AS1 Gene

FOXP1-AS1 (FOXP1 Antisense RNA 1) is an RNA Gene, and is affiliated with the non-coding RNA class.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for FOXP1-AS1 Gene

Genomics for FOXP1-AS1 Gene

Regulatory Elements for FOXP1-AS1 Gene

Enhancers for FOXP1-AS1 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH03G071303 1.3 Ensembl ENCODE dbSUPER 0.4 +14.9 14863 4.0 SOX13 CTCF TEAD4 CHD7 ZNF48 RAD21 YY1 ZNF366 POLR2A PATZ1 GC03M071311 FOXP1-AS1
GH03G071287 0.7 dbSUPER 0.7 -0.1 -83 3.7 ZNF263 PKNOX1 FOXA2 ZBTB21 FEZF1 EP300 ZNF843 OSR2 CTBP1 PRDM6 FOXP1-AS1 ENSG00000277539
GH03G071301 0.8 Ensembl dbSUPER 0.4 +11.3 11343 0.2 ZBED1 JUNB TBX21 GABPA GC03M071311 FOXP1-AS1
GH03G071299 0.7 FANTOM5 dbSUPER 0.4 +9.6 9623 0.2 EP300 EIF4E3 FOXP1-AS1 GC03M071311
GH03G071302 0.7 Ensembl dbSUPER 0.4 +12.0 12043 0.8 ZBED1 TBX21 GC03M071311 FOXP1-AS1
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around FOXP1-AS1 on UCSC Golden Path with GeneCards custom track

Genomic Location for FOXP1-AS1 Gene

Chromosome:
3
Start:
71,289,758 bp from pter
End:
71,305,854 bp from pter
Size:
16,097 bases
Orientation:
Plus strand

Genomic View for FOXP1-AS1 Gene

Genes around FOXP1-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
FOXP1-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for FOXP1-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for FOXP1-AS1 Gene

Proteins for FOXP1-AS1 Gene

Post-translational modifications for FOXP1-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for FOXP1-AS1 Gene

Domains & Families for FOXP1-AS1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for FOXP1-AS1 Gene

Function for FOXP1-AS1 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for FOXP1-AS1 Gene

Localization for FOXP1-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for FOXP1-AS1 Gene

Pathways & Interactions for FOXP1-AS1 Gene

SuperPathways for FOXP1-AS1 Gene

No Data Available

Interacting Proteins for FOXP1-AS1 Gene

Gene Ontology (GO) - Biological Process for FOXP1-AS1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for FOXP1-AS1 Gene

Drugs & Compounds for FOXP1-AS1 Gene

No Compound Related Data Available

Transcripts for FOXP1-AS1 Gene

mRNA/cDNA for FOXP1-AS1 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for FOXP1-AS1 Gene

No ASD Table

Relevant External Links for FOXP1-AS1 Gene

GeneLoc Exon Structure for
FOXP1-AS1
ECgene alternative splicing isoforms for
FOXP1-AS1

Expression for FOXP1-AS1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for FOXP1-AS1 Gene

mRNA differential expression in normal tissues according to GTEx for FOXP1-AS1 Gene

This gene is overexpressed in Testis (x41.2).
genes like me logo Genes that share expression patterns with FOXP1-AS1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for FOXP1-AS1 Gene

Orthologs for FOXP1-AS1 Gene

Evolution for FOXP1-AS1 Gene

ENSEMBL:
Gene Tree for FOXP1-AS1 (if available)
TreeFam:
Gene Tree for FOXP1-AS1 (if available)

No data available for Orthologs for FOXP1-AS1 Gene

Paralogs for FOXP1-AS1 Gene

No data available for Paralogs for FOXP1-AS1 Gene

Variants for FOXP1-AS1 Gene

Sequence variations from dbSNP and Humsavar for FOXP1-AS1 Gene

SNP ID Clin Chr 03 pos Sequence Context AA Info Type
rs1000213390 -- 71,288,863(+) AGTTA(C/T)ATAAA intron-variant, upstream-variant-2KB
rs1000245820 -- 71,289,087(+) TGGAG(C/T)GCAGT intron-variant, upstream-variant-2KB
rs1000271420 -- 71,301,431(+) CAAAG(C/T)GCACA intron-variant
rs1000898107 -- 71,306,153(+) CGCCC(A/G)CTGTG intron-variant, upstream-variant-2KB
rs1000938962 -- 71,289,128(+) CTCCC(G/T)GGTCC intron-variant, upstream-variant-2KB

Relevant External Links for FOXP1-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
FOXP1-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for FOXP1-AS1 Gene

Disorders for FOXP1-AS1 Gene

Relevant External Links for FOXP1-AS1

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
FOXP1-AS1

No disorders were found for FOXP1-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for FOXP1-AS1 Gene

Publications for FOXP1-AS1 Gene

No publications were found for FOXP1-AS1 Gene.

Products for FOXP1-AS1 Gene

Sources for FOXP1-AS1 Gene

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