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Aliases for FOXO3B Gene

Aliases for FOXO3B Gene

  • Forkhead Box O3B Pseudogene 2 3 5
  • Forkhead (Drosophila) Homolog (Rhabdomyosarcoma) Like 1 Pseudogene 1 2
  • Forkhead(Drosophila) Homolog (Rhabdomyosarcoma) 1 Like Pseudogene 1 3
  • Forkhead Homolog (Rhabdomyosarcoma) Like 1 Pseudogene 1 3
  • Forkhead Homolog (Rhabdomyosarcoma) Pseudogene 3
  • FKHRL1P1 3
  • ZNF286C 3

External Ids for FOXO3B Gene

Previous HGNC Symbols for FOXO3B Gene

  • FKHRL1P1

Previous GeneCards Identifiers for FOXO3B Gene

  • GC17U990029
  • GC17M018518
  • GC17M018776
  • GC17M018517
  • GC17M018565
  • GC17M018590

Summaries for FOXO3B Gene

GeneCards Summary for FOXO3B Gene

FOXO3B (Forkhead Box O3B Pseudogene) is a Pseudogene.

Additional gene information for FOXO3B Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for FOXO3B Gene

Genomics for FOXO3B Gene

Regulatory Elements for FOXO3B Gene

Enhancers for FOXO3B Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH17H018410 1.2 ENCODE dbSUPER 62.5 +261.9 261932 1.5 SIN3A GLI4 ZNF2 ZNF302 KLF7 SP3 YY2 REST TSHZ1 ZNF488 FOXO3B MAPK7 DRG2 SMCR8 ZNF286B ENSG00000264885 SMCR5 SHMT1 ENSG00000262202 NOS2P2
GH17H019254 0.9 dbSUPER 81.5 -581.8 -581777 1.7 ZNF493 ZFP64 ZNF121 ZNF302 KLF7 ZNF202 SP3 ZC3H11A REST ZNF623 ENSG00000264885 FOXO3B MAPK7 FAM106A SMCR8 CCDC144B ZNF286B ENSG00000262202 ENSG00000273018 ENSG00000264932
GH17H017913 1.9 FANTOM5 Ensembl ENCODE dbSUPER 37.6 +758.9 758903 1.6 PKNOX1 ATF1 MLX ARID4B SIN3A FEZF1 BRCA1 ZNF2 TCF12 GLIS2 DRG2 RAI1 FOXO3B ENSG00000264885 SMCR8 LOC100419436 RPL13P12 ZNF286B FAM106A MPRIP-AS1
GH17H017748 2 FANTOM5 Ensembl ENCODE dbSUPER 24 +919.3 919346 10.3 HDGF PKNOX1 ARNT ARID4B SIN3A DMAP1 ZBTB7B YY1 ZNF143 FOS ZNF286B ENSG00000264885 RAI1 USP32P2 LOC100419436 FOXO3B MPRIP-AS1 SMCR5 DRG2 ENSG00000273018
GH17H018087 1.2 ENCODE 39.6 +585.0 584965 1.9 MLX FEZF1 DMAP1 YY1 SLC30A9 ZNF143 ZNF548 SP3 NFYC ZC3H11A ENSG00000264885 DRG2 ZNF286B RAI1 FOXO3B LOC100419436 FAM106A SMCR5 SMCR8 ENSG00000273018
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around FOXO3B on UCSC Golden Path with GeneCards custom track

Promoters for FOXO3B Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters
ENSR00000092110 480 999

Genomic Locations for FOXO3B Gene

Genomic Locations for FOXO3B Gene
chr17:18,665,923-18,673,181
(GRCh38/hg38)
Size:
7,259 bases
Orientation:
Minus strand
chr17:18,569,236-18,576,494
(GRCh37/hg19)

Genomic View for FOXO3B Gene

Genes around FOXO3B on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
FOXO3B Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for FOXO3B Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for FOXO3B Gene

Proteins for FOXO3B Gene

Post-translational modifications for FOXO3B Gene

No Post-translational modifications

No data available for DME Specific Peptides for FOXO3B Gene

Domains & Families for FOXO3B Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for FOXO3B Gene

Function for FOXO3B Gene

Molecular function for FOXO3B Gene

GENATLAS Biochemistry:
Drosophila forkhead gene homolog 1,like-sequence pseudogene 1

Phenotypes From GWAS Catalog for FOXO3B Gene

Phenotypes for FOXO3B Gene

genes like me logo Genes that share phenotypes with FOXO3B: view

Animal Model Products

Transcription Factor Targets for FOXO3B Gene

Selected GeneGlobe predicted Target genes for FOXO3B

Clone Products

No data available for Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Animal Models , miRNA and HOMER Transcription for FOXO3B Gene

Localization for FOXO3B Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for FOXO3B Gene

Pathways & Interactions for FOXO3B Gene

SuperPathways for FOXO3B Gene

No Data Available

Interacting Proteins for FOXO3B Gene

Gene Ontology (GO) - Biological Process for FOXO3B Gene

None

No data available for Pathways by source and SIGNOR curated interactions for FOXO3B Gene

Drugs & Compounds for FOXO3B Gene

No Compound Related Data Available

Transcripts for FOXO3B Gene

mRNA/cDNA for FOXO3B Gene

(3) Additional mRNA sequences :
(38) Selected AceView cDNA sequences:
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for FOXO3B Gene

Forkhead box O3B pseudogene:
Representative Sequences:

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for FOXO3B Gene

No ASD Table

Relevant External Links for FOXO3B Gene

GeneLoc Exon Structure for
FOXO3B
ECgene alternative splicing isoforms for
FOXO3B

Expression for FOXO3B Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for FOXO3B Gene

NURSA nuclear receptor signaling pathways regulating expression of FOXO3B Gene:

FOXO3B

SOURCE GeneReport for Unigene cluster for FOXO3B Gene:

Hs.592126
genes like me logo Genes that share expression patterns with FOXO3B: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for FOXO3B Gene

Orthologs for FOXO3B Gene

Evolution for FOXO3B Gene

ENSEMBL:
Gene Tree for FOXO3B (if available)
TreeFam:
Gene Tree for FOXO3B (if available)

No data available for Orthologs for FOXO3B Gene

Paralogs for FOXO3B Gene

No data available for Paralogs for FOXO3B Gene

Variants for FOXO3B Gene

Sequence variations from dbSNP and Humsavar for FOXO3B Gene

SNP ID Clin Chr 17 pos Sequence Context AA Info Type
rs1000436850 -- 18,672,562(+) GTGTA(C/T)CCCCG intron-variant, nc-transcript-variant
rs1000678739 -- 18,667,001(+) TTTTT(-/C)TTTTT intron-variant, nc-transcript-variant
rs1001581449 -- 18,672,495(+) TGCCC(A/G)GAGCC intron-variant, nc-transcript-variant
rs1001654905 -- 18,672,247(+) CAGTT(A/C)CCTCA intron-variant, nc-transcript-variant
rs1001957146 -- 18,666,105(+) AGGCG(G/T)CAGAG intron-variant, nc-transcript-variant

Structural Variations from Database of Genomic Variants (DGV) for FOXO3B Gene

Variant ID Type Subtype PubMed ID
nsv9504 CNV gain+loss 18304495
nsv833389 CNV gain 17160897
nsv827913 CNV gain 20364138
nsv523721 CNV gain 19592680
nsv499818 OTHER inversion 21111241
nsv1060744 CNV gain 25217958
nsv1057803 CNV loss 25217958
esv3572454 CNV gain 25503493

Relevant External Links for FOXO3B Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
FOXO3B

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for FOXO3B Gene

Disorders for FOXO3B Gene

Relevant External Links for FOXO3B

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
FOXO3B

No disorders were found for FOXO3B Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for FOXO3B Gene

Publications for FOXO3B Gene

  1. Cloning and characterization of three human forkhead genes that comprise an FKHR-like gene subfamily. (PMID: 9479491) Anderson MJ … Arden KC (Genomics 1998) 2 3 60
  2. Proteomic analyses reveal distinct chromatin-associated and soluble transcription factor complexes. (PMID: 25609649) Li X … Chen J (Molecular systems biology 2015) 3 60
  3. Genetic investigation of FOXO3A requires special attention due to sequence homology with FOXO3B. (PMID: 22588664) Flachsbart F … Nebel A (European journal of human genetics : EJHG 2013) 3 60
  4. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg RL … Mammalian Gene Collection Program Team (Proceedings of the National Academy of Sciences of the United States of America 2002) 3 60
  5. Molecular cloning of FKHRL1P2, a member of the developmentally regulated fork head domain transcription factor family. (PMID: 9852958) DaSilva L … Farrar WL (Gene 1998) 3 60

Products for FOXO3B Gene

Sources for FOXO3B Gene

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