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Aliases for FOXO3B Gene

Aliases for FOXO3B Gene

  • Forkhead Box O3B Pseudogene 2 3 5
  • Forkhead (Drosophila) Homolog (Rhabdomyosarcoma) Like 1 Pseudogene 1 2
  • Forkhead(Drosophila) Homolog (Rhabdomyosarcoma) 1 Like Pseudogene 1 3
  • Forkhead Homolog (Rhabdomyosarcoma) Like 1 Pseudogene 1 3
  • Forkhead Homolog (Rhabdomyosarcoma) Pseudogene 3
  • FKHRL1P1 3
  • ZNF286C 3

External Ids for FOXO3B Gene

Previous HGNC Symbols for FOXO3B Gene

  • FKHRL1P1

Previous GeneCards Identifiers for FOXO3B Gene

  • GC17U990029
  • GC17M018518
  • GC17M018776
  • GC17M018517
  • GC17M018565
  • GC17M018590

Summaries for FOXO3B Gene

GeneCards Summary for FOXO3B Gene

FOXO3B (Forkhead Box O3B Pseudogene) is a Pseudogene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for FOXO3B Gene

Genomics for FOXO3B Gene

Regulatory Elements for FOXO3B Gene

Enhancers for FOXO3B Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH17F019052 0.5 Ensembl 72.8 -379.5 -379520 0.2 ZNF493 ZNF140 ZNF266 ZNF704 ZNF514 ZEB1 ZNF791 RBAK ZNF354C ZNF138 DRG2 FOXO3B ENSG00000264885 FAM106A SMCR8 ENSG00000262202 ZNF286B TVP23B ENSG00000264932 ENSG00000273018
GH17F019053 0.6 Ensembl 72.8 -379.9 -379920 0.2 ZNF493 ZFP64 ZNF140 ZNF266 ZNF704 ZNF514 ZEB1 ZNF791 RBAK ZNF354C DRG2 FOXO3B ENSG00000264885 FAM106A SMCR8 ENSG00000262202 ZNF286B TVP23B ENSG00000264932 ENSG00000273018
GH17F017913 1.6 FANTOM5 Ensembl ENCODE 37.5 +758.9 758933 1.7 PKNOX1 MLX ARID4B SIN3A FEZF1 ZNF48 BRCA1 ZNF2 ZNF121 GLIS2 ENSG00000264885 DRG2 FOXO3B ZNF286B LOC100419436 SMCR8 RPL13P12 MPRIP-AS1 FAM106A RAI1
GH17F017970 0.7 FANTOM5 ENCODE 27.9 +701.1 701118 3.1 HDGF PKNOX1 CREB3L1 ARID4B SIN3A DMAP1 YY1 SLC30A9 ZNF143 ZNF207 FOXO3B SMCR8 FAM106A DRG2 TOM1L2 ZNF286B USP32P2 ENSG00000264885 DRC3 ENSG00000250111
GH17F018181 1.1 FANTOM5 ENCODE 27.4 +488.1 488102 8.0 MLX CREB3L1 ZFP64 FEZF1 DMAP1 YY1 SLC30A9 ZNF143 ZNF548 ZNF263 SMCR8 FOXO3B MYO15A DRG2 LLGL1 ZNF286B MIEF2 FAM106A NOS2P2 ENSG00000262202
- Elite enhancer/Elite enhancer-gene association Download Table
Download GeneHancer data dump

Enhancers around FOXO3B on UCSC Golden Path with GeneCards custom track

Promoters for FOXO3B Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters
ENSR00001805670 480 999 ZNF316

Genomic Location for FOXO3B Gene

Chromosome:
17
Start:
18,665,923 bp from pter
End:
18,673,181 bp from pter
Size:
7,259 bases
Orientation:
Minus strand

Genomic View for FOXO3B Gene

Genes around FOXO3B on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
FOXO3B Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for FOXO3B Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for FOXO3B Gene

Proteins for FOXO3B Gene

Post-translational modifications for FOXO3B Gene

No Post-translational modifications

No data available for DME Specific Peptides for FOXO3B Gene

Domains & Families for FOXO3B Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for FOXO3B Gene

Function for FOXO3B Gene

Molecular function for FOXO3B Gene

GENATLAS Biochemistry:
Drosophila forkhead gene homolog 1,like-sequence pseudogene 1

Phenotypes for FOXO3B Gene

genes like me logo Genes that share phenotypes with FOXO3B: view

Animal Model Products

Transcription Factor Targets for FOXO3B Gene

Selected GeneGlobe predicted Target genes for FOXO3B

No data available for Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Animal Models , miRNA and HOMER Transcription for FOXO3B Gene

Localization for FOXO3B Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for FOXO3B Gene

Pathways & Interactions for FOXO3B Gene

SuperPathways for FOXO3B Gene

No Data Available

Interacting Proteins for FOXO3B Gene

Gene Ontology (GO) - Biological Process for FOXO3B Gene

None

No data available for Pathways by source and SIGNOR curated interactions for FOXO3B Gene

Transcripts for FOXO3B Gene

mRNA/cDNA for FOXO3B Gene

(3) Additional mRNA sequences :
(38) Selected AceView cDNA sequences:
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for FOXO3B Gene

Forkhead box O3B pseudogene:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for FOXO3B Gene

No ASD Table

Relevant External Links for FOXO3B Gene

GeneLoc Exon Structure for
FOXO3B
ECgene alternative splicing isoforms for
FOXO3B

Expression for FOXO3B Gene

mRNA expression in normal human tissues for FOXO3B Gene

NURSA nuclear receptor signaling pathways regulating expression of FOXO3B Gene:

FOXO3B

SOURCE GeneReport for Unigene cluster for FOXO3B Gene:

Hs.592126
genes like me logo Genes that share expression patterns with FOXO3B: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for FOXO3B Gene

Orthologs for FOXO3B Gene

Evolution for FOXO3B Gene

ENSEMBL:
Gene Tree for FOXO3B (if available)
TreeFam:
Gene Tree for FOXO3B (if available)

No data available for Orthologs for FOXO3B Gene

Paralogs for FOXO3B Gene

No data available for Paralogs for FOXO3B Gene

Variants for FOXO3B Gene

Sequence variations from dbSNP and Humsavar for FOXO3B Gene

SNP ID Clin Chr 17 pos Sequence Context AA Info Type
rs1062091 -- 18,667,232(-) CAAGG(A/G)CTTGC intron-variant, nc-transcript-variant
rs111352459 -- 18,667,792(+) GTTTT(C/G)AACAT intron-variant, nc-transcript-variant
rs111389076 -- 18,668,150(+) CCCTA(C/G/T)ACAGG intron-variant, nc-transcript-variant
rs111473399 -- 18,665,758(+) GTGAC(A/G)CTGGA intron-variant, downstream-variant-500B
rs111659173 -- 18,671,296(+) ACCAA(A/G)AGCGC intron-variant, nc-transcript-variant

Structural Variations from Database of Genomic Variants (DGV) for FOXO3B Gene

Variant ID Type Subtype PubMed ID
esv3572454 CNV gain 25503493
nsv1057803 CNV loss 25217958
nsv1060744 CNV gain 25217958
nsv499818 OTHER inversion 21111241
nsv523721 CNV gain 19592680
nsv827913 CNV gain 20364138
nsv833389 CNV gain 17160897
nsv9504 CNV gain+loss 18304495

Relevant External Links for FOXO3B Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
FOXO3B

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for FOXO3B Gene

Disorders for FOXO3B Gene

Relevant External Links for FOXO3B

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
FOXO3B

No disorders were found for FOXO3B Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for FOXO3B Gene

Publications for FOXO3B Gene

  1. Cloning and characterization of three human forkhead genes that comprise an FKHR-like gene subfamily. (PMID: 9479491) Anderson M.J. … Arden K.C. (Genomics 1998) 2 3 64
  2. Proteomic analyses reveal distinct chromatin-associated and soluble transcription factor complexes. (PMID: 25609649) Li X. … Chen J. (Mol. Syst. Biol. 2015) 3 64
  3. Genetic investigation of FOXO3A requires special attention due to sequence homology with FOXO3B. (PMID: 22588664) Flachsbart F. … Nebel A. (Eur. J. Hum. Genet. 2013) 3 64
  4. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 3 64
  5. Molecular cloning of FKHRL1P2, a member of the developmentally regulated fork head domain transcription factor family. (PMID: 9852958) DaSilva L. … Farrar W.L. (Gene 1998) 3 64

Products for FOXO3B Gene

Sources for FOXO3B Gene

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