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Category   Symbol Source: HGNC EntrezGene Ensembl GeneCards RNA genes CroW21
GIFtS

FOXO1 Gene

protein-coding   GIFtS: 62
GCID: GC13M041129

forkhead box O1

(Previous name: forkhead homolog in rhabdomyosarcoma )
(Previous symbols: FKHR, FOXO1A)
 Explore 62 diseases affiliated with
FOXO1 via our new
 Human Malady Compendium 
Biological research products
for FOXO1
    

(According to 1HGNC, 2Entrez Gene,
3UniProtKB/Swiss-Prot, 4UniProtKB/TrEMBL, 5OMIM, 6GeneLoc, 7Ensembl, 8DME, 9miRBase, and/or 10fRNAdb)
About This Section

Aliases
Forkhead Box O11 2     Forkhead Homolog In Rhabdomyosarcoma1
FKHR1 2 3 5     Forkhead Box Protein O12
FOXO1A1 2 3 5     Forkhead, Drosophila, Homolog Of, In Rhabdomyosarcoma2
FKH11 2     Forkhead In Rhabdomyosarcoma3
Forkhead Box Protein O1A2 3     

External Ids:    HGNC: 38191   Entrez Gene: 23082   Ensembl: ENSG000001509077   OMIM: 1365335   UniProtKB: Q127783   

Export aliases for FOXO1 gene to outside databases

Previous GC identifers: GC13M040028 GC13M021931


(According to Entrez Gene, Tocris Bioscience, Wikipedia's Gene Wiki, PharmGKB,
UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL)
About This Section

Entrez Gene summary for FOXO1:
This gene belongs to the forkhead family of transcription factors which are characterized by a distinct forkhead
domain. The specific function of this gene has not yet been determined; however, it may play a role in myogenic growth
and differentiation. Translocation of this gene with PAX3 has been associated with alveolar rhabdomyosarcoma.
(provided by RefSeq, Jul 2008)

UniProtKB/Swiss-Prot: FOXO1_HUMAN, Q12778
Function: Transcription factor that is the main target of insulin signaling and regulates metabolic homeostasis in
response to oxidative stress. Binds to the insulin response element (IRE) with consensus sequence 5'-TT[G/A]TTTTG-3'
and the related Daf-16 family binding element (DBE) with consensus sequence 5'-TT[G/A]TTTAC-3'. Activity suppressed by
insulin. Main regulator of redox balance and osteoblast numbers and controls bone mass. Orchestrates the endocrine
function of the skeleton in regulating glucose metabolism. Acts syngernistically with ATF4 to suppress
osteocalcin/BGLAP activity, increasing glucose levels and triggering glucose intolerance and insulin insensitivity.
Also suppresses the transcriptional activity of RUNX2, an upstream activator of osteocalcin/BGLAP. In hepatocytes,
promotes gluconeogenesis by acting together with PPARGC1A to activate the expression of genes such as IGFBP1, G6PC and
PPCK1. Important regulator of cell death acting downstream of CDK1, PKB/AKT1 and SKT4/MST1. Promotes neural cell
death. Mediates insulin action on adipose. Regulates the expression of adipogenic genes such as PPARG during
preadipocyte differentiation and, adipocyte size and adipose tissue-specific gene expression in response to excessive
calorie intake. Regulates the transcriptional activity of GADD45A and repair of nitric oxide-damaged DNA in beta-cells

Gene Wiki entry for FOXO1


(According to GeneLoc and/or HGNC, and/or
Entrez Gene (NCBI build 37),
and/or miRBase,
Genomic Views according to UCSC (hg19) and Ensembl (release 69), Regulatory elements and Epigenetics data according to QIAGEN, SABiosciences, and/or SwitchGear Genomics)
About This Section
RefSeq DNA sequence:
NC_000013.10  NC_018924.1  NT_024524.14  
Regulatory elements:
   SABiosciences Regulatory transcription factor binding sites in the FOXO1 gene promoter:
         COUP-TF1   COUP-TF   AP-1   COUP   HNF-4alpha1   
         Other transcription factors

SwitchGear Promoter luciferase reporter plasmids (see all 2): FOXO1 promoter sequence
   Search SABiosciences Chromatin IP Primers for FOXO1

Epigenetics:
QIAGEN PyroMark CpG Assay predesigned Pyrosequencing DNA Methylation assays in human, mouse, rat FOXO1


Genomic Location:
Genomic View: UCSC Golden Path with GeneCards custom track

Entrez Gene cytogenetic band: 13q14.1   Ensembl cytogenetic band:  13q14.11   HGNC cytogenetic band: 13q14.1

FOXO1 Gene in genomic location: bands according to Ensembl, locations according to (and/or Entrez Gene and/or Ensembl if different)
FOXO1 gene location

GeneLoc information about chromosome 13         GeneLoc Exon Structure

GeneLoc location for GC13M041129:  view genomic region     (about GC identifiers)

Start:
41,129,801 bp from pter      End:
41,240,734 bp from pter
Size:
110,934 bases      Orientation:
minus strand

(According to 1UniProtKB, HORDE, neXtProt, Ensembl, and/or Reactome, Modification sites according to 2PhosphoSitePlus, Specific Peptides from DME, Protein expression images according to data from SPIRE MOPED and PaxDb, RefSeq according to NCBI, PDB rendering according to OCA and/or Proteopedia, Recombinant Proteins from EMD Millipore, R&D Systems, GenScript, Enzo Life Sciences, OriGene, Novus Biologicals, Sino Biological, ProSpec, and/or Uscn,
Biochemical Assays by EMD Millipore, R&D Systems, OriGene, GenScript, Cell Signaling Technology, Enzo Life Sciences, and/or Uscn, Ontologies according to Gene Ontology Consortium 01 Mar 2013 and Entrez Gene, Antibodies by EMD Millipore, R&D Systems, GenScript, Cell Signaling Technology, OriGene, Novus Biologicals, Thermo Fisher Scientific, Abcam, and/or Uscn)
About This Section

UniProtKB/Swiss-Prot: FOXO1_HUMAN, Q12778 (See protein sequence)
Recommended Name: Forkhead box protein O1  
Size: 655 amino acids; 69662 Da
Subunit: Interacts with LRPPRC. Interacts with RUNX2; the interaction inhibits RUNX2 transcriptional activity and
mediates the IGF1/insulin-dependent BGLAP expression in osteoblasts Interacts with PPP2R1A; the interaction regulates
the dephosphorylation of FOXO1 at Thr-24 and Ser-256 leading to its nuclear import (By similarity). Interacts with
NLK. Interacts with SIRT1; the interaction results in the deacetylation of FOXO1 leading to activation of
FOXO1-mediated transcription of genes involved in DNA repair and stress resistance. Binds to CDK1. Interacts with the
14-3-3 proteins, YWHAG and YWHAZ; the interactions require insulin-stimulated phosphorylation on Thr-24, promote
nuclear exit and loss of transcriptional activity. Interacts with SKP2; the interaction ubiquitinates FOXO1 leading to
its proteosomal degradation. The interaction requires the presence of KRIT1. Interacts (via the C-terminal half) with
ATF4 (via its DNA-binding domain); the interaction occurs in osteoblasts, regulates glucose homeostasis via
suppression of beta-cell proliferation and subsequent decrease in insulin production. Interacts with PRMT1; the
interaction methylates FOXO1, prevents PKB/AKT1 phosphorylation and retains FOXO1 in the nucleus. Interacts with EP300
and CREBBP; the interactions acetylate FOXO1
Subcellular location: Cytoplasm. Nucleus. Note=Shuttles between the cytoplasm and nucleus. Largely nuclear in
unstimulated cells. In osteoblasts, colocalizes with ATF4 and RUNX2 in the nucleus (By similarity). Insulin-induced
phosphorylation at Ser-256 by PKB/AKT1 leads, via stimulation of Thr-24 phosphorylation, to binding of 14-3-3 proteins
and nuclear export to the cytoplasm where it is degraded by the ubiquitin-proteosomal pathway. Phosphorylation at
Ser-249 by CDK1 disrupts binding of 14-3-3 proteins and promotes nuclear accumulation. Phosphorylation by NLK results
in nuclear export. Translocates to the nucleus upon oxidative stress-induced phosphorylation at Ser-212 by STK4/MST1.
SGK1-mediated phosphorylation also results in nuclear translocation. Retained in the nucleus under stress stimuli
including oxidative stress, nutrient deprivation or nitric oxide. Retained in the nucleus on methylation
3 PDB 3D structures from and Proteopedia for FOXO1:
3CO6 (3D)        3CO7 (3D)        3COA (3D)    
Secondary accessions: O43523 Q5VYC7 Q6NSK6

Explore the universe of human proteins at neXtProt for FOXO1: NX_Q12778

Post-translational modifications:

  • Phosphorylation by NLK promotes nuclear export and inhibits the transcriptional activity. In response to growth
  • factors, phosphorylation on Thr-24, Ser-256 and Ser-322 by PKB/AKT1 promotes nuclear export and inactivation of
    transactivational activity. Phosphorylation on Thr-24 is required for binding 14-3-3 proteins. Phosphorylation of
    Ser-256 decreases DNA-binding activity and promotes the phosphorylation of Thr-24 and Ser-319, permitting
    phosphorylation of Ser-322 and Ser-325, probably by CDK1, leading to nuclear exclusion and loss of function. Stress
    signals, such as response to oxygen or nitric oxide, attenuate the PKB/AKT1-mediated phosphorylation leading to
    nuclear retention. Phosphorylation of Ser-329 is independent of IGF1 and leads to reduced function. Dephosphorylated
    on Thr-24 and Ser-256 by PP2A in beta-cells under oxidative stress leading to nuclear retention (By similarity).
    Phosphorylation of Ser-249 by CDK1 disrupts binding of 14-3-3 proteins leading to nuclear accumulation and has no
    effect on DNA-binding nor transcriptional activity. Phosphorylation by STK4/MST1 on Ser-212, upon oxidative stress,
    inhibits binding to 14-3-3 proteins and nuclear export1
  • Ubiquitinated by SRT2. Ubiquitination leads to proteasomal degradation1
  • Methylation inhibits AKT1-mediated phosphorylation at Ser-256 and is increased by oxidative stress (By similarity)1
  • Once in the nucleus, acetylated by CREBBP/EP300. Acetylation diminishes the interaction with target DNA and attenuates
  • the transcriptional activity. It increases the phosphorylation at Ser-256. Deacetylation by SIRT1 results in
    reactivation of the transcriptional activity. Oxidative stress by hydrogen peroxide treatment appears to promote
    deacetylation and uncoupling of insulin-induced phosphorylation. By contrast, resveratrol acts independently of
    acetylation1
  • View modification sites using PhosphoSitePlus2
  • View neXtProt modification sites for NX_Q12778

  • FOXO1 Protein expression data from MOPED and PaxDb:    About this image 
    Estimated protein expression log10 (pmol).

    REFSEQ proteins: NP_002006.2  
    ENSEMBL proteins: 
     ENSP00000368880  
    Reactome Protein details: Q12778
    Human Recombinant Protein Products: 
    EMD Millipore Purified and/or Recombinant FOXO1 Protein
    Browse R&D Systems for human recombinant proteins
    Browse recombinant and purified proteins available from Enzo Life Sciences
    OriGene Purified Protein: FOXO1
    OriGene Protein Over-expression Lysate: FOXO1
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    Novus Biologicals FOXO1 Proteins
    Novus Biologicals FOXO1 Lysate
    Browse Sino Biological Recombinant Proteins
    Browse ProSpec Recombinant Proteins
    Uscn Proteins for FOXO1

    Gene Ontology (GO): 5/7 cellular component terms (GO ID links to tree view) (see all 7):    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0005634nucleus IDA--
    GO:0005654nucleoplasm TAS--
    GO:0005667transcription factor complex IBA--
    GO:0005737cytoplasm IDA11237865
    GO:0005739mitochondrion ISS--


    FOXO1 for ontologies           About GeneDecksing



    FOXO1 Antibody Products: 
    EMD Millipore Mono- and Polyclonal Antibodies for the study of FOXO1
    R&D Systems Antibodies for FOXO1 (FoxO1/FKHR)
    Cell Signaling Technology (CST) Antibodies for FOXO1  (FOXO1A)
    OriGene Antibodies (see all 4): FOXO1
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    Novus Biologicals FOXO1 Antibodies
    Abcam antibodies for FOXO1 
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    ThermoFisher Antibody for FOXO1

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    Browse Enzo Life Sciences for kits & assays
    Uscn ELISAs and CLIAs for FOXO1


    (According to InterPro, ProtoNet, UniProtKB, and/or BLOCKS, Sets of similar genes according to GeneDecks)
    About This Section

    FOXO1 for domains           About GeneDecksing

    3 InterPro domains/families:
     IPR011991 WHTH_trsnscrt_rep_DNA-bd_dom
     IPR018122 TF_fork_head_CS
     IPR001766 TF_fork_head

    Graphical View of Domain Structure for InterPro Entry Q12778

    ProtoNet protein and cluster: Q12778

    UniProtKB/Swiss-Prot: FOXO1_HUMAN, Q12778
    Similarity: Contains 1 fork-head DNA-binding domain


    (According to 1UniProtKB, Genatlas, LifeMap Discovery™, IUBMB, and/or 2DME, Human phenotypes from GenomeRNAi, Animal models from MGI Mar 06 2013,
    bound targets from SABiosciences, miRNA Gene Targets from miRTarBase shRNA from OriGene, RNAi from EMD Millipore, siRNAs from OriGene, QIAGEN, microRNA from QIAGEN, Gene Editing from DNA2.0, Clones from EMD Millipore, OriGene, SwitchGear Genomics, GenScript, Sino Biological, DNA2.0, and Vector BioLabs, Cell Lines from GenScript, LifeMap BioReagents, In Situ Hybridization Assays from Advanced Cell Diagnostics, Ontologies according to Gene Ontology Consortium 01 Mar 2013 via Entrez Gene.)
    About This Section

    Function Summary:

         UniProtKB/Swiss-Prot: FOXO1_HUMAN, Q12778
    Function: Transcription factor that is the main target of insulin signaling and regulates metabolic homeostasis in
    response to oxidative stress. Binds to the insulin response element (IRE) with consensus sequence 5'-TT[G/A]TTTTG-3'
    and the related Daf-16 family binding element (DBE) with consensus sequence 5'-TT[G/A]TTTAC-3'. Activity suppressed by
    insulin. Main regulator of redox balance and osteoblast numbers and controls bone mass. Orchestrates the endocrine
    function of the skeleton in regulating glucose metabolism. Acts syngernistically with ATF4 to suppress
    osteocalcin/BGLAP activity, increasing glucose levels and triggering glucose intolerance and insulin insensitivity.
    Also suppresses the transcriptional activity of RUNX2, an upstream activator of osteocalcin/BGLAP. In hepatocytes,
    promotes gluconeogenesis by acting together with PPARGC1A to activate the expression of genes such as IGFBP1, G6PC and
    PPCK1. Important regulator of cell death acting downstream of CDK1, PKB/AKT1 and SKT4/MST1. Promotes neural cell
    death. Mediates insulin action on adipose. Regulates the expression of adipogenic genes such as PPARG during
    preadipocyte differentiation and, adipocyte size and adipose tissue-specific gene expression in response to excessive
    calorie intake. Regulates the transcriptional activity of GADD45A and repair of nitric oxide-damaged DNA in beta-cells
    Induction: Expression is regulated by KRIT1. Levels of expression also regulated by FOXC1 which binds to a conserved
    element in the FOXO1 promoter

    10/722 SABiosciences Target genes for FOXO1 (see all 722):
    A1CF AADACL2 ABHD3 ABT1 ACAT1 ACE2 ACO1 ACPP ACSF2 ACSL6

    miRNA
    Products:
        
    miRTarBase miRNAs that target FOXO1:
    hsa-mir-153 (MIRT003299), hsa-mir-182 (MIRT001086), hsa-mir-9 (MIRT003300), hsa-mir-183 (MIRT003298), hsa-mir-186 (MIRT003297), hsa-mir-27a (MIRT001088), hsa-mir-96 (MIRT001087)

    OriGene 3'-UTR Clone: FOXO1
    Browse MicroRNA Expression Plasmids
    QIAGEN Custom miScript Target Protector blocks miRNA-binding site of human, mouse, rat FOXO1
    8/114 QIAGEN miScript miRNA Assays for microRNAs that regulate FOXO1 (see all 114):
    hsa-miR-411* hsa-miR-26a-2* hsa-miR-3607-3p hsa-miR-300 hsa-miR-411 hsa-miR-15a hsa-miR-128 hsa-miR-578
    SwitchGear 3'UTR luciferase reporter plasmidFOXO1 3' UTR sequence
    Inhib. RNA
    Products:
        
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    OriGene 29mer shRNA kits in GFP-retroviral vector in human, mouse, rat for FOXO1 (see all 4)
    OriGene shRNA RFP: FOXO1
    OriGene siRNA: FOXO1
    QIAGEN FlexiTube/FlexiPlate siRNA for gene silencing in human, mouse, rat FOXO1

    Gene Editing
    Products:
    DNA2.0 Custom Protein Engineering Service for FOXO1

    Clone
    Products:
         
    Browse Clones for the Expression of Recombinant Proteins Available from EMD Millipore
    OriGene Myc/DDK tagged cDNA clones in CMV expression vector in human, mouse, rat for FOXO1 (see all 2)
    OriGene untagged cDNA clones in CMV expression vector in human, mouse, rat for FOXO1
    OriGene custom cloning services – gene synthesis, subcloning, mutagenesis, variant library, vector shuttling 
    GenScript: all cDNA clones in your preferred vector: FOXO1 (NM_002015)
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    Vector BioLabs ready-to-use adenovirus/AAV for human, mouse, rat FOXO1 

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    Search LifeMap BioReagents cell lines for FOXO1

    In Situ Assay
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    Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for FOXO1

    Gene Ontology (GO): 5/12 molecular function terms (GO ID links to tree view) (see all 12):    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0001078RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in negative regulation of transcription IEA--
    GO:0003677DNA binding ----
    GO:0003682chromatin binding ISS--
    GO:0003690double-stranded DNA binding IBA--
    GO:0003700sequence-specific DNA binding transcription factor activity ----


    FOXO1 for ontologies           About GeneDecksing


    2 GenomeRNAi human phenotypes for FOXO1:
     Decreased viability with carbo  Increased cell death in breast 

    Animal Models:
         Mouse knock-outs for FOXO1: Foxo1tm1.1Mrc Foxo1tm1.1Rdp Foxo1tm1Tf
         15/20 MGI mutant phenotypes (inferred from 12 alleles(MGI details for Foxo1) (see all 20):
     adipose tissue  behavior/neurological  cardiovascular system  cellular  craniofacial 
     digestive/alimentary  embryogenesis  endocrine/exocrine gland  growth/size  hematopoietic system 
     homeostasis/metabolism  immune system  integument  limbs/digits/tail  liver/biliary system 

    FOXO1 for phenotypes           About GeneDecksing


    (Pathways according to EMD Millipore, R&D Systems, Cell Signaling Technology, KEGG, PharmGKB, BioSystems, Reactome, Tocris Bioscience, GeneGo (Thomson Reuters), QIAGEN, and/or UniProtKB, Sets of similar genes according to GeneDecks, Interaction Networks according to SABiosciences, and/or STRING, Interactions according to 1UniProtKB, 2MINT, 3I2D, and/or 4STRING, with links to IntAct and Ensembl, Ontologies according to Gene Ontology Consortium 01 Mar 2013 via Entrez Gene).
    About This Section

    Unified GeneCards pathways - 5/42 super-pathways (see all 42About this table 
    See pathways by source

    Super-pathwaycontained gene-specific pathways
    1Signaling by FGFR
    8/12 pathways (see all 12)
    Signaling by FGFR1.00
    DAP12 signaling0.83
    Downstream signaling of activated FGFR0.92
    Signaling by EGFR in Cancer0.83
    Signaling by FGFR in disease0.91
    DAP12 interactions0.76
    Signaling by ERBB20.89
    Signaling by PDGF0.72
    2IL-9 Signaling Pathways
    8/11 pathways (see all 11)
    IL-9 Signaling Pathways1.00
    IL-4 Signaling Pathways0.80
    IL-21 Signaling Pathways0.90
    IL-7 Signaling Pathway0.38
    IL-7 Signaling Pathways0.90
    Development_Thrombopoietin-regulated cell processes0.36
    Common Cytokine Receptor Gamma-Chain Family Signaling Pathways0.90
    Development Thrombopoietin-regulated cell processes0.36
    3PIP3 activates AKT signaling
    8/10 pathways (see all 10)
    PIP3 activates AKT signaling1.00
    PI3K/AKT activation0.97
    PI3K/AKT Signaling in Cancer1.00
    GAB1 signalosome0.96
    PI3K events in ERBB2 signaling1.00
    Constitutive PI3K/AKT Signaling in Cancer0.88
    PI3K events in ERBB4 signaling1.00
    Signaling by SCF-KIT0.72
    4Development_PDGF signaling via STATs and NF-kB
    Development_Angiopoietin - Tie2 signaling0.38
    Angiopoietin-TIE2 Signaling0.13
    Development Angiopoietin - Tie2 signaling0.38
    Angiopoietin receptor Tie2-mediated signaling0.11
    5Immune System
    Immune System1.00
    Innate Immune System0.46
    Adaptive Immune System0.59

    Pathway sources
    See GeneCards unified pathways
    Show all pathways

    2 EMD Millipore Pathways for FOXO1
        Development Angiopoietin - Tie2 signaling
    Development Thrombopoietin-regulated cell processes

    5/9 R&D Systems Pathways for FOXO1 (see all 9)
        IL-21 Signaling Pathways
    IL-2 Signaling Pathways
    IL-4 Signaling Pathways
    Adipocytokines & Insulin Signaling
    IL-7 Signaling Pathways

    5/6 Downloadable PowerPoint Slides of QIAGEN Pathway Central Maps for FOXO1 (see all 6)
        DHA Signaling
    Molecular Mechanisms of Cancer
    ErbB Family Pathway
    Glioblastoma Multiforme
    Akt Signaling

    1 Cell Signaling Technology (CST) Pathway for FOXO1
        PI3K / Akt Signaling

    2 GeneGo (Thomson Reuters) Pathways for FOXO1
        Development Thrombopoietin-regulated cell processes
    Development Angiopoietin - Tie2 signaling

    5/24 BioSystems Pathways for FOXO1 (see all 24
        AGE/RAGE pathway
    Adipogenesis
    EGFR1 Signaling Pathway
    Integrated Breast Cancer Pathway
    Signaling Pathways in Glioblastoma

    5/34        Reactome Pathways for FOXO1 (see all 34)
        Signaling by EGFR in Cancer
    Downstream signal transduction
    Signal Transduction
    Signaling by PDGF
    Downstream Signaling Events Of B Cell Receptor (BCR)


    3         Kegg Pathways  (Kegg details for FOXO1):
        Insulin signaling pathway
    Pathways in cancer
    Prostate cancer


    FOXO1 for pathways           About GeneDecksing

    Interactions:

        SABiosciences Gene Network CentralTM Interacting Genes and Proteins Network for FOXO1

    STRING Interaction Network Preview (showing 5 interactants - click image to see 25)

    5/92 Interacting proteins for FOXO1 (Q127781, 2, 3 ENSP000003688804) via UniProtKB, MINT, STRING, and/or I2D (see all 92)
    InteractantInteraction Details
    GeneCardExternal ID(s)
    SIRT1Q96EB61, 3, ENSP000002120154EBI-1108782,EBI-1802965 I2D: score=4 STRING: ENSP00000212015
    CDK1P064931, 3EBI-1108782,EBI-444308 I2D: score=1 
    YWHAZP631042, 3, ENSP000003095034MINT-8005539 MINT-8005546 I2D: score=5 STRING: ENSP00000309503
    CREBBPQ927931, 3, ENSP000002623674EBI-1108782,EBI-81215 I2D: score=4 STRING: ENSP00000262367
    ESR1P033721, 3, ENSP000002062494EBI-1108782,EBI-78473 I2D: score=4 STRING: ENSP00000206249
    About this table

    Gene Ontology (GO): 5/34 biological process terms (GO ID links to tree view) (see all 34):    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0001568blood vessel development IBA--
    GO:0001659temperature homeostasis ISS--
    GO:0001678cellular glucose homeostasis ISS--
    GO:0006351transcription, DNA-dependent ----
    GO:0006355regulation of transcription, DNA-dependent ----


    FOXO1 for ontologies           About GeneDecksing



    (Chemical Compounds according to UniProtKB, Enzo Life Sciences, EMD Millipore, Tocris Bioscience HMDB, BitterDB, and/or Novoseek, and Drugs according to DrugBank, Enzo Life Sciences, and/or PharmGKB, with drugs/clinical trials/news search links to CenterWatch)
    About This Section

    FOXO1 for compounds           About GeneDecksing

    Browse Small Molecules at EMD Millipore
    Browse drugs & compounds from Enzo Life Sciences

    Browse Tocris compounds for FOXO1
    10/21 Novoseek chemical compound relationships for FOXO1 gene (see all 21)    About this table
    Compound   -log (P-Val)   Hits   PubMed IDs for Articles with Shared Sentences (# sentences)
    ly294002 69 9 11030146 (1), 17408630 (1), 16133873 (1), 11593406 (1) (see all 6)
    phosphatidylinositol 67.3 16 11672436 (1), 15778376 (1), 17202144 (1), 12606579 (1) (see all 9)
    glycogen 51.5 10 15494423 (1), 15574783 (1), 12702569 (1), 16973122 (1) (see all 10)
    phosphoenolpyruvate 50.9 1 10913147 (1)
    phosphoinositide 44.9 2 12150827 (1), 17986386 (1)
    rapamycin 42.1 4 15494423 (1), 12782577 (1), 17077083 (1), 18202777 (1)
    leptomycin b 36.2 2 16133873 (1)
    threonine 33.8 6 12359217 (1), 13679577 (1), 11733864 (1), 18211894 (1)
    glucose 24.3 14 19141580 (3), 10960473 (2), 13679577 (1), 16670091 (1) (see all 8)
    serine 24 5 13679577 (1), 11733864 (1), 18211894 (1)

    Search CenterWatch for drugs/clinical trials and news about FOXO1 

    (Secondary structures according to fRNAdb,
    GenBank/EMBL/DDBJ Accessions according to
    Unigene (Build 235 Homo sapiens; Mar 10 2013) or GenBank,
    RefSeq according to Entrez Gene,
    DOTS (version 10), and/or AceView, transcript ids from Ensembl with links to UCSC,
    exon structure from GeneLoc, alternative splicing isoforms according to ASD and/or ECgene,
    RNAi Products from EMD Millipore,
    siRNAs from OriGene, QIAGEN, shRNA from OriGene, microRNA from QIAGEN,
    Tagged/untagged cDNA clones from OriGene, SwitchGear Genomics, GenScript, DNA2.0, Vector BioLabs, Primers from OriGene, SABiosciences, and/or QIAGEN )
    About This Section

    REFSEQ mRNAs for FOXO1 gene: 
    NM_002015.3  

    Unigene Cluster for FOXO1:

    Forkhead box O1
    Hs.370666  [show with all ESTs]
    Unigene Representative Sequence: NM_002015
    2 Ensembl transcripts including schematic representations, and UCSC links where relevant:
    ENST00000379561(uc010acc.1 uc001uxl.4) ENST00000473775

    miRNA
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    OriGene 3'-UTR Clone: FOXO1
    Browse OriGene MicroRNA Expression Plasmids
    QIAGEN Custom miScript Target Protector blocks miRNA-binding site of human, mouse, rat FOXO1
    8/114 QIAGEN miScript miRNA Assays for microRNAs that regulate FOXO1 (see all 114):
    hsa-miR-411* hsa-miR-26a-2* hsa-miR-3607-3p hsa-miR-300 hsa-miR-411 hsa-miR-15a hsa-miR-128 hsa-miR-578
    SwitchGear 3'UTR luciferase reporter plasmidFOXO1 3' UTR sequence
    Inhib. RNA
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    Additional cDNA sequence: 

    AF032885.1 AK310511.1 BC021981.2 BC070065.1 BT007455.1 BX648278.1 HQ824715.1 U02310.1 
    U36922.1 

    7 DOTS entries:

    DT.317826  DT.92454302  DT.40105832  DT.120780767  DT.95151680  DT.101958152  DT.92454306 

    24/263 AceView cDNA sequences (see all 263):

    T85079 AI523901 BC021981 CB069714 CA447146 AW182316 BU156620 CA309741 
    BQ879203 AI813640 AW050917 AA134749 T85080 AW072902 AI889401 AA172023 
    BF733006 BC070065 AA130464 BG056904 U36922 AI277554 AA164998 NM_002015 

    GeneLoc Exon Structure

    4 Alternative Splicing Database (ASD) splice patterns (SP) for FOXO1    About this scheme

    ExUns: 1 ^ 2 ^ 3 ^ 4 ^ 5a · 5b · 5c ^ 6
    SP1:        -     -     -                           
    SP2:              -                                 
    SP3:              -     -                           
    SP4:                    -                           


    ECgene alternative splicing isoforms for FOXO1

    (RNA expression data according to H-InvDB, NONCODE, miRBase, and RNAdb, Expression images according to data from BioGPS, Illumina Human BodyMap, and CGAP SAGE, Sets of similar genes according to GeneDecks, in vivo and in vitro expression data from LifeMap Discovery™, plus additional links to Genevestigator, and/or SOURCE, and/or BioGPS, and/or UniProtKB,
    PCR Arrays from SABiosciences, Primers from OriGene, SABiosciences, and/or QIAGEN, In Situ Hybridization Assays from Advanced Cell Diagnostics)
    About This Section

    FOXO1 expression in normal human tissues (normalized intensities)
    See probesets specificity/sensitivity at GeneAnnot
    About this imageBioGPS
    CGAP TAG: CCTCCTGCAT

    Microarray
    RNAseq (Illumina Body Map)
    (100×FPKM)½
    SAGE (Serial Analysis of Gene Expression)

    About this image

    FOXO1 expression in embryonic tissues and stem cells
    Expression by the Database of Embryonic development, Stem cell research, and Regenerative medicine    About this table
    3 LifeMap In Vivo Development Anatomical Compartments/Cells 
    Tissue Anatomical Compartment CellCategory (developmental path)
    OvaryPrimary FollicleGranulosa CellsOvary
    OvaryPrimary FolliclePrimary OocyteFemale Gametocytes, Germ Cells
    OvaryPrimordial FolliclePrimary OocyteFemale Gametocytes, Germ Cells
    Expression: Positive    Negative     Selective marker
    Experimental details: Curated     Microarrays     In-situ hybridization
    Stem Cell Differentiation: 5 LifeMap Cells 
    NameCategory
    PureStem™ endothelial progenitor 30-MV2-12 (Embryonic Progenitor Cell)Blood, Endothelium
    PureStem™ endothelial Progenitor 30-SM2-3 (Embryonic Progenitor Cell)Blood, Endothelium
    PureStem™ endothelial progenitor 30-SM2-1 (Embryonic Progenitor Cell)Endothelium
    PureStem™ endothelial progenitor 30-MV2-14 (Embryonic Progenitor Cell)Endothelium
    HyStem+TGF?3+GDF5-induced MEL2 cells (HyStem+TGF?3+GDF5 in...)Bone, Cartilage

    See FOXO1 Protein Expression from SPIRE MOPED and PaxDB
    Genevestigator expression for FOXO1

    SOURCE GeneReport for Unigene cluster: Hs.370666

    UniProtKB/Swiss-Prot: FOXO1_HUMAN, Q12778
    Tissue specificity: Ubiquitous

        SABiosciences Expression via Pathway-Focused PCR Arrays including FOXO1 (see all 7): 
              PI3K-AKT Signaling Pathway in human mouse rat
              Transcription Factors in human mouse rat
              Skeletal Muscle: Myogenesis & Myopathy in human mouse rat
              Prostate Cancer in human mouse rat
              Apoptosis 384HT in human mouse rat

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    (Orthologs according to 1,2HomoloGene (2older version, for species not in 1newer version), 3euGenes, 4SGD , 5MGI Mar 06 2013, with possible further links to Flybase and/or WormBase, and/or 6Ensembl pan taxonomic compara , Gene Trees according to Ensembl and TreeFam)
    About This Section

    This gene was present in the common ancestor of animals.

    Orthologs for FOXO1 gene from 6/20 species (see all 20)    About this table
    Organism Taxonomic
    classification
    Gene Description Human
    Similarity
    Orthology
    Type
    Details
    chicken
    (Gallus gallus)
    Aves FOXO1A6
    forkhead box O1A
    79(a)
    1 ↔ 1
    1(174857577-174916173)
    lizard
    (Anolis carolinensis)
    Reptilia FOXO16
    --
    67(a)
    1 ↔ 1
    1(132471541-132519420)
    tropical clawed frog
    (Xenopus tropicalis)
    Amphibia Str.146252 Transcribed sequence with weak similarity to protein more 82.1(n)    BX702088.1 
    zebrafish
    (Danio rerio)
    Actinopterygii foxo1a1 forkhead box O1 a 65.25(n)
    64.43(a)
      768121  NM_001077257.2  NP_001070725.2 
    fruit fly
    (Drosophila melanogaster)
    Insecta foxo6
    forkhead box, sub-group O
    28(a)
    1 → many
    3R(9882690-9913700)
    worm
    (Caenorhabditis elegans)
    Secernentea daf-166
    Forkhead box protein O
    25(a)
    1 → many
    I(10750332-10776689)


    ENSEMBL Gene Tree for FOXO1 (if available)
    TreeFam Gene Tree for FOXO1 (if available) 

    (Paralogs according to 1HomoloGene,
    2Ensembl, and 3SIMAP, Pseudogenes according to 4Pseudogene.org Build 68)
    About This Section
    Paralogs for FOXO1 gene
    FOXO42  FOXO62  FOXO32  
    3 SIMAP similar genes for FOXO1 using alignment to 2 protein entries:     FOXO1_HUMAN (see all proteins):
    DKFZp781A0677    FOXO3    FOXO4

    FOXO1 for paralogs           About GeneDecksing


    1 Pseudogenes.org Pseudogene for FOXO1
    PGOHUM00000235489


    (SNPs/Variants according to the 1NCBI SNP Database, 2Ensembl, 3PupaSUITE, UniProtKB, and DNA2.0, Linkage Disequilibrium by HapMap, Structural Variations(CNVs/InDels/Inversions) from the Database of Genomic Variants, Mutations from the Human Gene Mutation Database (HGMD) and the Locus Specific Mutation Databases (LSDB), Blood group antigen gene mutations by BGMUT, Resequencing Primers from QIAGEN, Cancer Mutation PCR Arrays and Assays and Copy Number PCR Arrays from SABiosciences)
    About This Section

    10/1800 NCBI SNPs in FOXO1 are shown (see all 1800    About this table
    Genomic DataTranscription Related DataAllele Frequencies
    SNP IDValidClinical
    significance
    Chr 13 posSequence#AA
    Chg
    TypeMore#Allele
    freq
    PopTotal
    sample
    More
    ----------
    rs740445321,2
    C,--21930907(+) CCTCAG/AACATC 1 -- ds50012Minor allele frequency- A:0.15WA 120
    rs762126941,2
    F,--21931155(+) AGTAAT/CTACTG 1 -- ds50011Minor allele frequency- C:0.05WA 118
    rs95770651,2
    C,F,A,H,--21931249(+) ACTATA/GGTTTG 1 -- ds500115Minor allele frequency- G:0.06NS EA NA WA 1864
    rs342412431,2
    C,--21931441(-) GCCATA/GAATGT 1 -- ut312Minor allele frequency- G:0.00NA 4
    rs18852691,2
    C,H--21932584(+) TACCCG/AGGAGG 1 -- ut31 ese37Minor allele frequency- A:0.00NA NS EA 558
    rs734632391,2
    C,--21933152(+) GTAAGT/CTCTAT 1 -- ut312Minor allele frequency- C:0.03WA 120
    rs581345821,2
    C,F,--21933574(+) GATGAA/GATTTC 1 -- ut311Minor allele frequency- G:0.12WA 118
    rs95770661,2
    C,F,A,H,--21933666(+) CCCAAC/ACAGGG 1 -- ut31 ese312Minor allele frequency- A:0.01NS EA NA 1484
    rs2005867911,2
    C--21934071(-) TTTGGA/GAAAAA 1 -- ut310--------
    rs95325581,2
    C,F,H,--21934532(+) AAATGT/CCTTTG 1 -- ut315Minor allele frequency- C:0.01NS EA NA 534

    HapMap Linkage Disequilibrium report for FOXO1 (41129801 - 41240734 bp)
    Structural Variations (Copy Number Variations, Insertions/Deletions, Inversions)
          Database of Genomic Variants (DGV) variations for FOXO1: --

    SABiosciences Cancer Mutation PCR Assays
    2 SABiosciences qBiomarker Copy Number PCR Arrays containing FOXO1:
    Oncogenes & Tumor Suppressor Genes 384HC
    Gastric Cancer
    QIAGEN SeqTarget long-range PCR primers in human, mouse, rat for resequencing FOXO1
    DNA2.0 Custom Variant and Variant Library Synthesis for FOXO1

    (in which this Gene is Involved, According to MalaCards, OMIM, UniProtKB, the University of Copenhagen DISEASES database, Novoseek, Genatlas, GeneTests, GAD, HuGE Navigator, and/or TGDB.)
    About This Section

    FOXO1 for disorders           About GeneDecksing

    OMIM gene information: 136533   
    OMIM disorders: 268220  
    UniProtKB/Swiss-Prot: FOXO1_HUMAN, Q12778
  • Defects in FOXO1 are a cause of rhabdomyosarcoma type 2 (RMS2) [MIM:268220]. It is a form of rhabdomyosarcoma,
  • a highly malignant tumor of striated muscle derived from primitive mesenchimal cells and exhibiting differentiation
    along rhabdomyoblastic lines. Rhabdomyosarcoma is one of the most frequently occurring soft tissue sarcomas and the
    most common in children. It occurs in four forms: alveolar, pleomorphic, embryonal and botryoidal rhabdomyosarcomas.
    Note=Chromosomal aberrations involving FOXO1 are found in rhabdomyosarcoma. Translocation (2;13)(q35;q14) with PAX3
    and translocation t(1;13)(p36;q14) with PAX7. The resulting protein is a transcriptional activator

    20/62 diseases for FOXO1 (see all 62):    About MalaCards
    rhabdomyosarcoma    alveolar rhabdomyosarcoma    botryoid rhabdomyosarcoma    nonalcoholic steatohepatitis
    clear cell renal cell carcinoma    non-hodgkin lymphoma    soft tissue sarcoma    autism spectrum disorder
    premature ovarian failure    amyotrophic lateral sclerosis    chronic obstructive pulmonary disease    insulin resistance
    lateral sclerosis    muscle hypertrophy    systemic lupus erythematosus    renal cell carcinoma
    embryonal rhabdomyosarcoma    lupus erythematosus    hodgkin's lymphoma    muscular atrophy

    4 diseases from the University of Copenhagen DISEASES database for FOXO1:
    Diabetes mellitus     Rhabdomyosarcoma     Hyperglycemia     Muscular atrophy

    10/19 Novoseek disease relationships for FOXO1 gene (see all 19)    About this table

    Disease   -log (P-Val)   Hits   PubMed IDs for Articles with Shared Sentences (# sentences)
    rhabdomyosarcoma alveolar 92.2 20 11171995 (2), 7630639 (1), 8875708 (1), 8889501 (1) (see all 18)
    muscle cancer 87.4 1 16140913 (1)
    rhabdomyosarcoma 74.1 14 11672436 (1), 12196101 (1), 12456685 (1), 19408047 (1) (see all 10)
    sarcoma 38.9 5 19408047 (2), 18303411 (1)
    tumors 32.4 21 12351634 (2), 19704258 (1), 8634710 (1), 15688409 (1) (see all 18)
    childhood cancer 28 2 10700864 (1), 15184910 (1)
    hyperinsulinemia 24.4 4 17408630 (1), 19563779 (1), 16670091 (1), 17317207 (1)
    insulin resistance 23.7 8 19490822 (2), 10912522 (1), 15910615 (1), 16041833 (1) (see all 7)
    fatty liver 19.5 1 17408630 (1)
    insulin sensitivity 15.5 4 16670091 (1), 16041833 (1), 17317207 (1)

    Human Genome Epidemiology (HuGE) Navigator: FOXO1 (16 documents)

    Export disorders for FOXO1 gene to outside databases

    (in PubMed. Associations of this gene to articles via 1Entrez Gene, 2UniProtKB/Swiss-Prot, 3HGNC, 4GAD, 5PharmGKB, 6HMDB, 7DrugBank, 8UniProtKB/TrEMBL, 9 Novoseek, and/or 10fRNAdb)
    About This Section

    PubMed articles for FOXO1 gene, integrated from 9 sources (see all 416):
    (articles sorted by number of sources associating them with FOXO1)
        Utopia: connect your pdf to the dynamic
    world of online information

    1. The DNA sequence and analysis of human chromosome 13. (PubMed id 15057823)1, 2, 3 Dunham A.... Ross M.T. (2004)
    2. Fusion of a fork head domain gene to PAX3 in the solid tumour alveolar rhabdomyosarcoma. (PubMed id 8275086)1, 2, 3 Galili N.... Barr F.G. (1993)
    3. Phosphorylation of serine 256 suppresses transactivation by FKHR (FOXO1) by multiple mechanisms. Direct and indirect effects on nuclear/cytoplasmic shuttling and DNA binding. (PubMed id 12228231)1, 2, 9 Zhang X.... Unterman T.G. (2002)
    4. Cloning and characterization of three human forkhead genes that comprise an FKHR-like gene subfamily. (PubMed id 9479491)1, 2, 9 Anderson M.J.... Arden K.C. (1998)
    5. The coactivator p300 directly acetylates the forkhead transcription factor Foxo1 and stimulates Foxo1-induced transcription. (PubMed id 15890677)1, 2, 9 Perrot V. and Rechler M.M. (2005)
    6. Arginine methylation of FOXO transcription factors inhibits their phosphorylation by Akt. (PubMed id 18951090)1, 2, 9 Yamagata K....Fukamizu A. (2008)
    7. Two novel phosphorylation sites on FKHR that are critical for its nuclear exclusion. (PubMed id 11980723)1, 2, 9 Rena G....Cohen P. (2002)
    8. Structural basis for DNA recognition by FoxO1 and its regulation by posttranslational modification. (PubMed id 18786403)1, 2, 9 Brent M.M....Marmorstein R. (2008)
    9. Regulation of neuronal cell death by MST1-FOXO1 signa ling. (PubMed id 19221179)1, 2 Yuan Z....Bonni A. (2009)
    10. Activation of FOXO1 by Cdk1 in cycling cells and postmitotic neurons. (PubMed id 18356527)1, 2 Yuan Z....Bonni A. (2008)

    (in PubMed, OMIM, and NCBI Bookshelf)
    About This Section
     ANDOR
    Aliases
    Disorders
    Free Text  

      Query String
    PubMed
    OMIM
    NCBI Bookshelf
      (Note: In FireFox, select the above section and copy using Ctrl-C)

    (According to Entrez Gene, HGNC, AceView, euGenes, Ensembl, miRBase, ECgene, Kegg, and/or H-InvDB)
    About This Section
    Entrez Gene: 2308 HGNC: 3819 AceView: FOXO1A Ensembl:ENSG00000150907 euGenes: HUgn2308
    ECgene: FOXO1 Kegg: 2308 H-InvDB: FOXO1

    (According to HUGE)
    About This Section
      --

    (According to PharmGKB, ATLAS, HORDE, IMGT, LEIDEN, UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL,
    Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot)
    About This Section
    NameDescription
    PharmGKB entry for FOXO1 Pharmacogenomics, SNPs, Pathways
    ATLAS Chromosomes in Cancer entry for FOXO1 Genetics and Cytogenetics in Oncology and Haematology

    (Patent information from GeneIP,
    Licensable technologies from WIS Yeda, Salk, Tufts,
    IP news from LifeMap Sciences, Inc.)
    About This Section
    Patent Information for FOXO1 gene:
    Search GeneIP for patents involving FOXO1

    GeneCards and IP:
    Japan Patent Office Licenses GeneCards     European Patent Office Licenses GeneCards     Improving the IP Search



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