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Aliases for FOXL2NB Gene

Aliases for FOXL2NB Gene

  • FOXL2 Neighbor 2 3
  • C3orf72 3 4
  • Chromosome 3 Open Reading Frame 72 2
  • FOXL2 Neighbor Protein 3
  • FLJ43329 Protein 3

External Ids for FOXL2NB Gene

Previous Symbols for FOXL2NB Gene

  • C3orf72

Summaries for FOXL2NB Gene

GeneCards Summary for FOXL2NB Gene

FOXL2NB (FOXL2 Neighbor) is a Protein Coding gene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for FOXL2NB Gene

Genomics for FOXL2NB Gene

Genomic Location for FOXL2NB Gene

Start:
138,947,234 bp from pter
End:
138,953,988 bp from pter
Size:
6,755 bases
Orientation:
Plus strand

Genomic View for FOXL2NB Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for FOXL2NB Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for FOXL2NB Gene

No data available for Regulatory Elements for FOXL2NB Gene

Proteins for FOXL2NB Gene

  • Protein details for FOXL2NB Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q6ZUU3-FOXNB_HUMAN
    Recommended name:
    FOXL2 neighbor protein
    Protein Accession:
    Q6ZUU3
    Secondary Accessions:
    • A6NGX0

    Protein attributes for FOXL2NB Gene

    Size:
    175 amino acids
    Molecular mass:
    18625 Da
    Quaternary structure:
    No Data Available

neXtProt entry for FOXL2NB Gene

Proteomics data for FOXL2NB Gene at MOPED

Post-translational modifications for FOXL2NB Gene

No Post-translational modifications

Other Protein References for FOXL2NB Gene

ENSEMBL proteins:
REFSEQ proteins:

No data available for DME Specific Peptides for FOXL2NB Gene

Domains for FOXL2NB Gene

Protein Domains for FOXL2NB Gene

ProtoNet:
genes like me logo Genes that share domains with FOXL2NB: view

No data available for Gene Families and UniProtKB/Swiss-Prot for FOXL2NB Gene

Function for FOXL2NB Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for FOXL2NB Gene

Localization for FOXL2NB Gene

No data available for Gene Ontology (GO) - Cellular Components for FOXL2NB Gene

Pathways for FOXL2NB Gene

SuperPathways for FOXL2NB Gene

No Data Available

Interacting Proteins for FOXL2NB Gene

Gene Ontology (GO) - Biological Process for FOXL2NB Gene

None

No data available for Pathways by source for FOXL2NB Gene

Transcripts for FOXL2NB Gene

mRNA/cDNA for FOXL2NB Gene

(2) REFSEQ mRNAs :
(6) Selected AceView cDNA sequences:
(3) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for FOXL2NB Gene

No ASD Table

Relevant External Links for FOXL2NB Gene

GeneLoc Exon Structure for
FOXL2NB
ECgene alternative splicing isoforms for
FOXL2NB

Expression for FOXL2NB Gene

mRNA expression in normal human tissues for FOXL2NB Gene

Integrated Proteomics: protein expression from ProteomicsDB and MOPED for FOXL2NB Gene

genes like me logo Genes that share expressions with FOXL2NB: view

Orthologs for FOXL2NB Gene

This gene was present in the common ancestor of human and chimp.

Orthologs for FOXL2NB Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia C3H3orf72 36
  • 98.86 (n)
  • 97.71 (a)
C3orf72 37
  • 98 (a)
OneToOne
Species with no ortholog for FOXL2NB:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • cow (Bos Taurus)
  • dog (Canis familiaris)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • mouse (Mus musculus)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for FOXL2NB Gene

ENSEMBL:
Gene Tree for FOXL2NB (if available)
TreeFam:
Gene Tree for FOXL2NB (if available)

Paralogs for FOXL2NB Gene

No data available for Paralogs for FOXL2NB Gene

Variants for FOXL2NB Gene

Sequence variations from dbSNP and Humsavar for FOXL2NB Gene

SNP ID Clin Chr 03 pos Sequence Context AA Info Type MAF
rs1395656 -- 138,952,584(+) cttac(C/T)gcagt utr-variant-3-prime, downstream-variant-500B
rs5852928 -- 138,949,391(+) TGTGC(-/GT/GTGTGTGTGTGT)GTGTG intron-variant
rs7645816 -- 138,951,853(+) GTGCT(C/T)CCCAC utr-variant-3-prime
rs7649365 -- 138,953,130(+) tgcct(C/G)aacct utr-variant-3-prime
rs12631526 -- 138,954,283(+) gtgca(A/G)tggcg downstream-variant-500B

Relevant External Links for FOXL2NB Gene

HapMap Linkage Disequilibrium report
FOXL2NB

No data available for Structural Variations from Database of Genomic Variants (DGV) for FOXL2NB Gene

Disorders for FOXL2NB Gene

No disorders were found for FOXL2NB Gene.

No data available for UniProtKB/Swiss-Prot for FOXL2NB Gene

Publications for FOXL2NB Gene

  1. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 4
  2. The DNA sequence, annotation and analysis of human chromosome 3. (PMID: 16641997) Muzny D.M. … Gibbs R.A. (Nature 2006) 4

Products for FOXL2NB Gene

  • DNA Methylation CpG Assay Predesigned for Pyrosequencing in human,mouse,rat
  • QIAGEN qRT-PCR Assays for microRNAs that regulate FOXL2NB
    • QuantiTect SYBR Green Assays in human,mouse,rat
    • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
    • QuantiFast Probe-based Assays in human,mouse,rat
    • Predesigned siRNA for gene silencing in human,mouse,rat for FOXL2NB
    • Block miRNA regulation of FOXL2NB using miScript Target Protectors

    Sources for FOXL2NB Gene

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