Free for academic non-profit institutions. Other users need a Commercial license

Aliases for FOXJ2 Gene

Aliases for FOXJ2 Gene

  • Forkhead Box J2 2 3 5
  • Fork Head Homologous X 3 4
  • FHX 3 4
  • Forkhead Box Protein J2 3
  • FOXJ2 Forkhead Factor 3

External Ids for FOXJ2 Gene

Previous GeneCards Identifiers for FOXJ2 Gene

  • GC12P008078
  • GC12P008079
  • GC12P008185
  • GC12P007996

Summaries for FOXJ2 Gene

GeneCards Summary for FOXJ2 Gene

FOXJ2 (Forkhead Box J2) is a Protein Coding gene. GO annotations related to this gene include transcription factor activity, sequence-specific DNA binding and RNA polymerase II core promoter proximal region sequence-specific DNA binding. An important paralog of this gene is FOXJ3.

UniProtKB/Swiss-Prot for FOXJ2 Gene

  • Transcriptional activator. Able to bind to two different type of DNA binding sites. Isoform FOXJ2.L behaves as a more potent transactivator than FOXJ2.S.

Gene Wiki entry for FOXJ2 Gene

No data available for Entrez Gene Summary , Tocris Summary , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for FOXJ2 Gene

Genomics for FOXJ2 Gene

Regulatory Elements for FOXJ2 Gene

Enhancers for FOXJ2 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH12F007933 0.5 ENCODE 16.7 -97.6 -97598 4.8 PKNOX1 ATF1 WRNIP1 ARID4B ZNF2 YY1 ZNF121 ZNF143 DEK PAF1 SLC2A14 ENSG00000256967 FOXJ2 PHB2 POU5F1P3 C1RL-AS1 SCARNA12 GDF3 GC12M007881 SLC2A3
GH12F007937 0.2 ENCODE 16.7 -94.5 -94450 1.3 CTCF LEF1 STAT1 RFX1 ARID1B GATA3 ATF3 THRAP3 IKZF1 STAT3 FOXJ2 PHB2 SLC2A3 GC12P007976
GH12F007834 1.2 FANTOM5 Ensembl ENCODE 13.5 -197.5 -197533 1.3 ESRRA SAP130 CEBPG ZNF644 ZNF121 CTBP1 GATA3 RFX1 L3MBTL2 SP5 SLC2A3 FOXJ2 NANOGP1 SLC2A14 ENSG00000255356 DPPA3 CLEC4A NECAP1 GC12M007850 ENSG00000201663
GH12F008057 0.8 Ensembl ENCODE 12.5 +25.6 25636 1.7 HLF SCRT2 CEBPB FOS EP300 C3AR1 FOXJ2
GH12F008069 0.2 Ensembl 12.4 +37.6 37598 1.8 PRDM1 FOXJ2 C3AR1 DPPA3 ENSG00000279865
- Elite enhancer/Elite enhancer-gene association Download Table
Download GeneHancer data dump

Enhancers around FOXJ2 on UCSC Golden Path with GeneCards custom track

Promoters for FOXJ2 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters
ENSR00001461206 297 2401 WRNIP1 ARID4B SIN3A ZNF48 ZNF121 GLIS2 ZNF263 SP3 GTF2B GLIS1
ENSR00001774718 1997 601 RNF2 TBL1XR1 NR2F1 TAL1 DPF2 ARID1B JUND SMARCA4 GATA2 NCOR1

Genomic Location for FOXJ2 Gene

Chromosome:
12
Start:
8,032,703 bp from pter
End:
8,055,522 bp from pter
Size:
22,820 bases
Orientation:
Plus strand

Genomic View for FOXJ2 Gene

Genes around FOXJ2 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
FOXJ2 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for FOXJ2 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for FOXJ2 Gene

Proteins for FOXJ2 Gene

  • Protein details for FOXJ2 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q9P0K8-FOXJ2_HUMAN
    Recommended name:
    Forkhead box protein J2
    Protein Accession:
    Q9P0K8
    Secondary Accessions:
    • A0AVK4
    • B2RMP3
    • Q96PS9
    • Q9NSN5

    Protein attributes for FOXJ2 Gene

    Size:
    574 amino acids
    Molecular mass:
    62395 Da
    Quaternary structure:
    No Data Available

    Alternative splice isoforms for FOXJ2 Gene

    UniProtKB/Swiss-Prot:

neXtProt entry for FOXJ2 Gene

Post-translational modifications for FOXJ2 Gene

  • Modification sites at PhosphoSitePlus
  • Modification sites at neXtProt

Other Protein References for FOXJ2 Gene

No data available for DME Specific Peptides for FOXJ2 Gene

Domains & Families for FOXJ2 Gene

Gene Families for FOXJ2 Gene

Protein Domains for FOXJ2 Gene

Suggested Antigen Peptide Sequences for FOXJ2 Gene

GenScript: Design optimal peptide antigens:

Graphical View of Domain Structure for InterPro Entry

Q9P0K8

UniProtKB/Swiss-Prot:

FOXJ2_HUMAN :
  • Contains 1 fork-head DNA-binding domain.
Domain:
  • Contains 1 fork-head DNA-binding domain.
genes like me logo Genes that share domains with FOXJ2: view

Function for FOXJ2 Gene

Molecular function for FOXJ2 Gene

UniProtKB/Swiss-Prot Function:
Transcriptional activator. Able to bind to two different type of DNA binding sites. Isoform FOXJ2.L behaves as a more potent transactivator than FOXJ2.S.

Gene Ontology (GO) - Molecular Function for FOXJ2 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0000978 RNA polymerase II core promoter proximal region sequence-specific DNA binding IDA 10777590
GO:0001077 transcriptional activator activity, RNA polymerase II core promoter proximal region sequence-specific binding IDA 10777590
GO:0003677 DNA binding IEA --
GO:0003700 transcription factor activity, sequence-specific DNA binding IEA --
GO:0005515 protein binding IPI 25416956
genes like me logo Genes that share ontologies with FOXJ2: view
genes like me logo Genes that share phenotypes with FOXJ2: view

Animal Model Products

Transcription Factor Targets for FOXJ2 Gene

Selected GeneGlobe predicted Target genes for FOXJ2

Inhibitory RNA Products

Flow Cytometry Products

No data available for Enzyme Numbers (IUBMB) , Human Phenotype Ontology , Animal Models and HOMER Transcription for FOXJ2 Gene

Localization for FOXJ2 Gene

Subcellular locations from UniProtKB/Swiss-Prot for FOXJ2 Gene

Subcellular locations from

COMPARTMENTS
Jensen Localization Image for FOXJ2 Gene COMPARTMENTS Subcellular localization image for FOXJ2 gene
Compartment Confidence
nucleus 5

Gene Ontology (GO) - Cellular Components for FOXJ2 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005634 nucleus IDA --
GO:0005730 nucleolus IDA --
genes like me logo Genes that share ontologies with FOXJ2: view

Pathways & Interactions for FOXJ2 Gene

SuperPathways for FOXJ2 Gene

No Data Available

Gene Ontology (GO) - Biological Process for FOXJ2 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0006351 transcription, DNA-templated IEA --
GO:0006355 regulation of transcription, DNA-templated IEA --
GO:0006366 transcription from RNA polymerase II promoter IEA --
GO:0045944 positive regulation of transcription from RNA polymerase II promoter IDA 10777590
genes like me logo Genes that share ontologies with FOXJ2: view

No data available for Pathways by source and SIGNOR curated interactions for FOXJ2 Gene

Transcripts for FOXJ2 Gene

Unigene Clusters for FOXJ2 Gene

Forkhead box J2:
Representative Sequences:

Inhibitory RNA Products

Flow Cytometry Products

Alternative Splicing Database (ASD) splice patterns (SP) for FOXJ2 Gene

ExUns: 1 ^ 2a · 2b ^ 3 ^ 4a · 4b ^ 5 ^ 6 ^ 7 ^ 8 ^ 9a · 9b ^ 10 ^ 11 ^ 12 ^ 13 ^ 14 ^ 15a · 15b
SP1:
SP2:
SP3: - - -
SP4: - - -
SP5:

Relevant External Links for FOXJ2 Gene

GeneLoc Exon Structure for
FOXJ2
ECgene alternative splicing isoforms for
FOXJ2

Expression for FOXJ2 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for FOXJ2 Gene

mRNA expression in embryonic tissues and stem cells from LifeMap Discovery

Protein differential expression in normal tissues from HIPED for FOXJ2 Gene

This gene is overexpressed in Fetal gut (16.3), Blymphocyte (12.6), Pancreas (10.8), and CD8 Tcells (8.0).

Integrated Proteomics: protein expression in normal tissues and cell lines from ProteomicsDB, PaxDb, MaxQB, and MOPED for FOXJ2 Gene



Protein tissue co-expression partners for FOXJ2 Gene

NURSA nuclear receptor signaling pathways regulating expression of FOXJ2 Gene:

FOXJ2

SOURCE GeneReport for Unigene cluster for FOXJ2 Gene:

Hs.120844

mRNA Expression by UniProt/SwissProt for FOXJ2 Gene:

Q9P0K8-FOXJ2_HUMAN
Tissue specificity: Widely expressed.
genes like me logo Genes that share expression patterns with FOXJ2: view

Primer Products

No data available for mRNA differential expression in normal tissues for FOXJ2 Gene

Orthologs for FOXJ2 Gene

This gene was present in the common ancestor of chordates.

Orthologs for FOXJ2 Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia FOXJ2 34 35
  • 99.3 (n)
dog
(Canis familiaris)
Mammalia FOXJ2 34 35
  • 91.83 (n)
cow
(Bos Taurus)
Mammalia FOXJ2 34 35
  • 87.2 (n)
mouse
(Mus musculus)
Mammalia Foxj2 34 16 35
  • 87.08 (n)
rat
(Rattus norvegicus)
Mammalia Foxj2 34
  • 86.51 (n)
oppossum
(Monodelphis domestica)
Mammalia FOXJ2 35
  • 83 (a)
OneToOne
platypus
(Ornithorhynchus anatinus)
Mammalia FOXJ2 35
  • 69 (a)
OneToOne
chicken
(Gallus gallus)
Aves FOXJ2 34 35
  • 77.78 (n)
lizard
(Anolis carolinensis)
Reptilia FOXJ2 35
  • 81 (a)
OneToOne
tropical clawed frog
(Silurana tropicalis)
Amphibia foxj2 34
  • 63.81 (n)
zebrafish
(Danio rerio)
Actinopterygii foxj2 35
  • 32 (a)
OneToOne
sea squirt
(Ciona savignyi)
Ascidiacea -- 35
  • 45 (a)
ManyToMany
Species where no ortholog for FOXJ2 was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)

Evolution for FOXJ2 Gene

ENSEMBL:
Gene Tree for FOXJ2 (if available)
TreeFam:
Gene Tree for FOXJ2 (if available)

Paralogs for FOXJ2 Gene

(1) SIMAP similar genes for FOXJ2 Gene using alignment to 1 proteins:

genes like me logo Genes that share paralogs with FOXJ2: view

Variants for FOXJ2 Gene

Sequence variations from dbSNP and Humsavar for FOXJ2 Gene

SNP ID Clin Chr 12 pos Sequence Context AA Info Type
rs10459104 -- 8,041,461(+) cctca(A/G)cctcc intron-variant, upstream-variant-2KB
rs10744135 -- 8,052,380(+) CACCC(A/G)GCTAA intron-variant
rs10846377 -- 8,037,284(+) GGTGC(G/T)GAAAG intron-variant
rs10846411 -- 8,053,571(+) TGAGT(A/G)TACAC utr-variant-3-prime
rs11057000 -- 8,036,733(+) AGGGA(C/T)GATGC intron-variant

Structural Variations from Database of Genomic Variants (DGV) for FOXJ2 Gene

Variant ID Type Subtype PubMed ID
esv2751118 CNV gain 17911159
esv2759877 CNV gain+loss 17122850
esv3580549 CNV gain 25503493
esv3628444 CNV loss 21293372
esv3628445 CNV gain 21293372
esv3628457 CNV gain 21293372
nsv1045521 CNV gain 25217958
nsv428270 CNV gain 18775914

Variation tolerance for FOXJ2 Gene

Residual Variation Intolerance Score: 36.6% of all genes are more intolerant (likely to be disease-causing)
Gene Damage Index Score: 2.05; 37.67% of all genes are more intolerant (likely to be disease-causing)

Relevant External Links for FOXJ2 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
FOXJ2

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for FOXJ2 Gene

Disorders for FOXJ2 Gene

Relevant External Links for FOXJ2

Genetic Association Database (GAD)
FOXJ2
Human Genome Epidemiology (HuGE) Navigator
FOXJ2
Atlas of Genetics and Cytogenetics in Oncology and Haematology:
FOXJ2

No disorders were found for FOXJ2 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for FOXJ2 Gene

Publications for FOXJ2 Gene

  1. FHX.L and FHX.S, two isoforms of the human fork-head factor FHX (FOXJ2) with differential activity. (PMID: 10966786) Perez-Sanchez C. … Rey-Campos J. (J. Mol. Biol. 2000) 2 3 4 22 64
  2. FHX, a novel fork head factor with a dual DNA binding specificity. (PMID: 10777590) Perez-Sanchez C. … Rey-Campos J. (J. Biol. Chem. 2000) 2 3 4 64
  3. Risk of meningioma and common variation in genes related to innate immunity. (PMID: 20406964) Rajaraman P. … Inskip P.D. (Cancer Epidemiol. Biomarkers Prev. 2010) 3 46 64
  4. Polymorphisms in innate immunity genes and risk of childhood leukemia. (PMID: 20438785) Han S. … Kang D. (Hum. Immunol. 2010) 3 46 64
  5. Candidate gene analysis in primary lymphedema. (PMID: 18564921) Ferrell R.E. … Finegold D.N. (Lymphat Res Biol 2008) 3 46 64

Products for FOXJ2 Gene

Sources for FOXJ2 Gene

Content
Loading form....