Set Analyses:
Advanced Search

Advanced Search

 
Search By
Section (entire)
for


 
or upload a file of gene symbols


Category   Symbol Source: HGNC EntrezGene Ensembl GeneCards RNA genes CroW21
GIFtS

FOXH1 Gene

protein-coding   GIFtS: 61
GCID: GC08M145669

forkhead box H1

 Explore 7 diseases affiliated with
FOXH1 via our new
 Human Malady Compendium 
Biological research products
for FOXH1
    

(According to 1HGNC, 2Entrez Gene,
3UniProtKB/Swiss-Prot, 4UniProtKB/TrEMBL, 5OMIM, 6GeneLoc, 7Ensembl, 8DME, 9miRBase, and/or 10fRNAdb)
About This Section

Aliases
Forkhead Box H11 2     Forkhead Box Protein H12
FAST11 2 3 5     TGF-Beta/Activin Signal Transducer2
Forkhead Activin Signal Transducer 22 3     FAST23
HFAST-11     Fast-13
FAST-12     Fast-23
Fast-23     Forkhead Activin Signal Transducer 13
Forkhead Activin Signal Transducer-12     

External Ids:    HGNC: 38141   Entrez Gene: 89282   Ensembl: ENSG000001609737   OMIM: 6036215   UniProtKB: O755933   

Export aliases for FOXH1 gene to outside databases

Previous GC identifers: GC08M143400 GC08M145737 GC08M145305 GC08M145704 GC08M145670 GC08M140814


(According to Entrez Gene, Tocris Bioscience, Wikipedia's Gene Wiki, PharmGKB,
UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL)
About This Section

Entrez Gene summary for FOXH1:
FOXH1 encodes a human homolog of Xenopus forkhead activin signal transducer-1. FOXH1 protein binds SMAD2 and activates
an activin response element via binding the DNA motif TGT(G/T)(T/G)ATT. (provided by RefSeq, Jul 2008)

UniProtKB/Swiss-Prot: FOXH1_HUMAN, O75593
Function: Transcriptional activator. Recognizes and binds to the DNA sequence 5'-TGT[GT][GT]ATT-3'. Required for
induction of the goosecoid (GSC) promoter by TGF-beta or activin signaling. Forms a transcriptionally active complex
containing FOXH1/SMAD2/SMAD4 on a site on the GSC promoter called TARE (TGF-beta/activin response element)

Gene Wiki entry for FOXH1


(According to GeneLoc and/or HGNC, and/or
Entrez Gene (NCBI build 37),
and/or miRBase,
Genomic Views according to UCSC (hg19) and Ensembl (release 69), Regulatory elements and Epigenetics data according to QIAGEN, SABiosciences, and/or SwitchGear Genomics)
About This Section
RefSeq DNA sequence:
NC_000008.10  NC_018919.1  NT_037704.5  
Regulatory elements:
   SABiosciences Regulatory transcription factor binding sites in the FOXH1 gene promoter:
         Sp1   p53   Nkx2-5   AP-2alpha   
         Other transcription factors

SwitchGear Promoter luciferase reporter plasmids (see all 2): FOXH1 promoter sequence
   Search SABiosciences Chromatin IP Primers for FOXH1

Epigenetics:
QIAGEN PyroMark CpG Assay predesigned Pyrosequencing DNA Methylation assays in human, mouse, rat FOXH1


Genomic Location:
Genomic View: UCSC Golden Path with GeneCards custom track

Entrez Gene cytogenetic band: 8q24.3   Ensembl cytogenetic band:  8q24.3   HGNC cytogenetic band: 8q24

FOXH1 Gene in genomic location: bands according to Ensembl, locations according to (and/or Entrez Gene and/or Ensembl if different)
FOXH1 gene location

GeneLoc information about chromosome 8         GeneLoc Exon Structure

GeneLoc location for GC08M145669:  view genomic region     (about GC identifiers)

Start:
145,698,795 bp from pter      End:
145,701,718 bp from pter
Size:
2,924 bases      Orientation:
minus strand

(According to 1UniProtKB, HORDE, neXtProt, Ensembl, and/or Reactome, Modification sites according to 2PhosphoSitePlus, Specific Peptides from DME, Protein expression images according to data from SPIRE MOPED and PaxDb, RefSeq according to NCBI, PDB rendering according to OCA and/or Proteopedia, Recombinant Proteins from EMD Millipore, R&D Systems, GenScript, Enzo Life Sciences, OriGene, Novus Biologicals, Sino Biological, ProSpec, and/or Uscn,
Biochemical Assays by EMD Millipore, R&D Systems, OriGene, GenScript, Cell Signaling Technology, Enzo Life Sciences, and/or Uscn, Ontologies according to Gene Ontology Consortium 01 Mar 2013 and Entrez Gene, Antibodies by EMD Millipore, R&D Systems, GenScript, Cell Signaling Technology, OriGene, Novus Biologicals, Thermo Fisher Scientific, Abcam, and/or Uscn)
About This Section

UniProtKB/Swiss-Prot: FOXH1_HUMAN, O75593 (See protein sequence)
Recommended Name: Forkhead box protein H1  
Size: 365 amino acids; 39257 Da
Subunit: Interacts with the MH2 domains of SMAD2 and SMAD3
Subcellular location: Nucleus
Secondary accessions: D3DWM4

Explore the universe of human proteins at neXtProt for FOXH1: NX_O75593

FOXH1 Protein expression data from MOPED and PaxDb:    About this image 

Estimated protein expression log10 (pmol).

REFSEQ proteins: NP_003914.1  
ENSEMBL proteins: 
 ENSP00000366534  
Reactome Protein details: O75593
Human Recombinant Protein Products: 
Browse Purified and Recombinant Proteins at EMD Millipore
Browse R&D Systems for human recombinant proteins
Browse recombinant and purified proteins available from Enzo Life Sciences
Browse OriGene full length recombinant human proteins expressed in human HEK293 cells
OriGene Protein Over-expression Lysate: FOXH1
OriGene Custom Protein Services for FOXH1 
GenScript Custom Purified and Recombinant Proteins Services for FOXH1
Novus Biologicals FOXH1 Lysate
Browse Sino Biological Recombinant Proteins
Browse ProSpec Recombinant Proteins
Uscn Proteins for FOXH1

Gene Ontology (GO): 4 cellular component terms (GO ID links to tree view):    About this table

GO IDQualified GO termEvidencePubMed IDs
GO:0005634nucleus IDA16120611
GO:0005654nucleoplasm TAS--
GO:0005667transcription factor complex IDA17438144
GO:0032444activin responsive factor complex IDA9389648


FOXH1 for ontologies           About GeneDecksing



FOXH1 Antibody Products: 
EMD Millipore Mono- and Polyclonal Antibodies for the study of FOXH1
R&D Systems Antibodies for FOXH1
Browse OriGene Antibodies
OriGene Custom Antibody Services for FOXH1 
GenScript Custom Superior Antibodies Services for FOXH1
Novus Biologicals FOXH1 Antibodies
Search for Antibodies for FOXH1 at Abcam  
Uscn Antibodies for FOXH1
Search ThermoFisher Antibodies for FOXH1

Assay Products for FOXH1: 
Browse Kits and Assays available from EMD Millipore
OriGene Custom Immunoassay Development
Browse OriGene Fluorogenic Cell Assay Kits
Browse R&D Systems for biochemical assays
GenScript Custom Assay Services for FOXH1
Browse Enzo Life Sciences for kits & assays
Uscn ELISAs and CLIAs for FOXH1


(According to InterPro, ProtoNet, UniProtKB, and/or BLOCKS, Sets of similar genes according to GeneDecks)
About This Section

FOXH1 for domains           About GeneDecksing

3 InterPro domains/families:
 IPR011991 WHTH_trsnscrt_rep_DNA-bd_dom
 IPR018122 TF_fork_head_CS
 IPR001766 TF_fork_head

Graphical View of Domain Structure for InterPro Entry O75593

ProtoNet protein and cluster: O75593

UniProtKB/Swiss-Prot: FOXH1_HUMAN, O75593
Domain: The FM region is required for binding SMAD2/SMAD4 complexes. FM2 is more effective than FM1 and only interacts
with phosphorylated SMAD2 that is in an activated SMAD complex (By similarity)
Similarity: Contains 1 fork-head DNA-binding domain


(According to 1UniProtKB, Genatlas, LifeMap Discovery™, IUBMB, and/or 2DME, Human phenotypes from GenomeRNAi, Animal models from MGI Mar 06 2013,
bound targets from SABiosciences, miRNA Gene Targets from miRTarBase shRNA from OriGene, RNAi from EMD Millipore, siRNAs from OriGene, QIAGEN, microRNA from QIAGEN, Gene Editing from DNA2.0, Clones from EMD Millipore, OriGene, SwitchGear Genomics, GenScript, Sino Biological, DNA2.0, and Vector BioLabs, Cell Lines from GenScript, LifeMap BioReagents, In Situ Hybridization Assays from Advanced Cell Diagnostics, Ontologies according to Gene Ontology Consortium 01 Mar 2013 via Entrez Gene.)
About This Section

Function Summary:

     UniProtKB/Swiss-Prot: FOXH1_HUMAN, O75593
Function: Transcriptional activator. Recognizes and binds to the DNA sequence 5'-TGT[GT][GT]ATT-3'. Required for
induction of the goosecoid (GSC) promoter by TGF-beta or activin signaling. Forms a transcriptionally active complex
containing FOXH1/SMAD2/SMAD4 on a site on the GSC promoter called TARE (TGF-beta/activin response element)

     Genatlas biochemistry entry for FOXH1:
forkhead box H1,TGF-beta/activin signal transducer,Xenopus homolog,ubiquitously expressed,also expressed in several
cancer cell lines binding SMAD2 (MADH2) and activating response element (ARE),may be in injunction with SMAD4 (MADH4)

miRNA
Products:
    
Browse 3'-UTR reporter clones for miRNA target validation
Browse MicroRNA Expression Plasmids
QIAGEN Custom miScript Target Protector blocks miRNA-binding site of human, mouse, rat FOXH1
7 QIAGEN miScript miRNA Assays for microRNAs that regulate FOXH1:
hsa-miR-18a hsa-miR-361-3p hsa-miR-3134 hsa-miR-1193 hsa-miR-18b hsa-miR-452 hsa-miR-4287
Browse SwitchGear 3'UTR luciferase reporter plasmids
Inhib. RNA
Products:
    
Browse for Gene Knock-down Tools from EMD Millipore
OriGene 29mer shRNA kits in GFP-retroviral vector in human, mouse, rat for FOXH1 (see all 4)
OriGene shRNA RFP: FOXH1
OriGene siRNA: FOXH1
QIAGEN FlexiTube/FlexiPlate siRNA for gene silencing in human, mouse, rat FOXH1

Gene Editing
Products:
DNA2.0 Custom Protein Engineering Service for FOXH1

Clone
Products:
     
Browse Clones for the Expression of Recombinant Proteins Available from EMD Millipore
OriGene Myc/DDK tagged cDNA clones in CMV expression vector in human, mouse, rat for FOXH1 (see all 2)
OriGene untagged cDNA clones in CMV expression vector in human, mouse, rat for FOXH1
OriGene custom cloning services – gene synthesis, subcloning, mutagenesis, variant library, vector shuttling 
GenScript: all cDNA clones in your preferred vector: FOXH1 (NM_003923)
Browse Sino Biological Human cDNA Clones
DNA2.0 Custom Codon Optimized Gene Synthesis Service for FOXH1
Vector BioLabs ready-to-use adenovirus/AAV for human, mouse, rat FOXH1 

Cell Line
Products:
     
GenScript Custom overexpressing Cell Line Services for FOXH1
Search LifeMap BioReagents cell lines for FOXH1

In Situ Assay
Products:
   

 
Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for FOXH1

Gene Ontology (GO): 5/16 molecular function terms (GO ID links to tree view) (see all 16):    About this table

GO IDQualified GO termEvidencePubMed IDs
GO:0001104RNA polymerase II transcription cofactor activity IEA--
GO:0001190RNA polymerase II transcription factor binding transcription factor activity involved in positive regulation of transcription IEA--
GO:0003677contributes to DNA binding IDA9389648
GO:0003690double-stranded DNA binding IBA--
GO:0003700sequence-specific DNA binding transcription factor activity NAS17507406


FOXH1 for ontologies           About GeneDecksing


1 GenomeRNAi human phenotype for FOXH1:
 Elongated cells 

Animal Models:
     Mouse knock-outs for FOXH1: Foxh1tm1Jlw Foxh1tm1.1Hmd
     13 MGI mutant phenotypes (inferred from 3 alleles(MGI details for Foxh1):
 cardiovascular system  craniofacial  digestive/alimentary  embryogenesis  growth/size 
 hematopoietic system  homeostasis/metabolism  immune system  mortality/aging  muscle 
 nervous system  renal/urinary system  respiratory system 

FOXH1 for phenotypes           About GeneDecksing


(Pathways according to EMD Millipore, R&D Systems, Cell Signaling Technology, KEGG, PharmGKB, BioSystems, Reactome, Tocris Bioscience, GeneGo (Thomson Reuters), QIAGEN, and/or UniProtKB, Sets of similar genes according to GeneDecks, Interaction Networks according to SABiosciences, and/or STRING, Interactions according to 1UniProtKB, 2MINT, 3I2D, and/or 4STRING, with links to IntAct and Ensembl, Ontologies according to Gene Ontology Consortium 01 Mar 2013 via Entrez Gene).
About This Section

Unified GeneCards pathways - 5/13 super-pathways (see all 13About this table 
See pathways by source

Super-pathwaycontained gene-specific pathways
1Development_TGF-beta receptor signaling
Development_TGF-beta receptor signaling1.00
Development TGF-beta receptor signaling0.96
2Signaling by NODAL
Signaling by NODAL1.00
Signaling by Activin0.36
3Signal transduction Activin A signaling regulation
Signal transduction Activin A signaling regulation1.00
Signal transduction_Activin A signaling regulation0.96
4SMAD Signaling Network
SMAD Signaling Network1.00
5TGF Beta Signaling Pathway
TGF Beta Signaling Pathway1.00

Pathway sources
See GeneCards unified pathways
Show all pathways

2 EMD Millipore Pathways for FOXH1
    Signal transduction Activin A signaling regulation
Development TGF-beta receptor signaling

1 R&D Systems Pathway for FOXH1
    TGF-beta Signaling Pathways

3 Downloadable PowerPoint Slides of QIAGEN Pathway Central Maps for FOXH1
    SMAD Signaling Network
BMP Pathway
TGF-Beta Pathway

2 GeneGo (Thomson Reuters) Pathways for FOXH1
    Signal transduction Activin A signaling regulation
Development TGF-beta receptor signaling

4 BioSystems Pathways for FOXH1 
    TGF Beta Signaling Pathway
Heart Development
TGF-beta Receptor Signaling Pathway
Regulation of nuclear SMAD2/3 signaling

4        Reactome Pathways for FOXH1
    Signaling by Activin
Developmental Biology
Signal Transduction
Signaling by NODAL



FOXH1 for pathways           About GeneDecksing

Interactions:

    SABiosciences Gene Network CentralTM Interacting Genes and Proteins Network for FOXH1

STRING Interaction Network Preview (showing 5 interactants - click image to see 19)

5/23 Interacting proteins for FOXH1 (O755931, 2, 3 ENSP000003665344) via UniProtKB, MINT, STRING, and/or I2D (see all 23)
InteractantInteraction Details
GeneCardExternal ID(s)
PIK3R1P279862, 3, ENSP000002743354MINT-8111991 I2D: score=3 STRING: ENSP00000274335
NCK1P163331, 3, ENSP000002889864EBI-1759806,EBI-3448658 I2D: score=2 STRING: ENSP00000288986
SMAD2Q157963, ENSP000002621604I2D: score=5 STRING: ENSP00000262160
SMAD3P840223, ENSP000003329734I2D: score=5 STRING: ENSP00000332973
GSCP569153, ENSP000002385584I2D: score=1 STRING: ENSP00000238558
About this table

Gene Ontology (GO): 5/25 biological process terms (GO ID links to tree view) (see all 25):    About this table

GO IDQualified GO termEvidencePubMed IDs
GO:0000122negative regulation of transcription from RNA polymerase II promoter ----
GO:0001568blood vessel development IBA--
GO:0001947heart looping IBA--
GO:0003139secondary heart field specification IEA--
GO:0003146NOT heart jogging IRD--


FOXH1 for ontologies           About GeneDecksing



(Chemical Compounds according to UniProtKB, Enzo Life Sciences, EMD Millipore, Tocris Bioscience HMDB, BitterDB, and/or Novoseek, and Drugs according to DrugBank, Enzo Life Sciences, and/or PharmGKB, with drugs/clinical trials/news search links to CenterWatch)
About This Section
Browse Small Molecules at EMD Millipore
Browse drugs & compounds from Enzo Life Sciences

Browse Tocris compounds for FOXH1
Search CenterWatch for drugs/clinical trials and news about FOXH1 

(Secondary structures according to fRNAdb,
GenBank/EMBL/DDBJ Accessions according to
Unigene (Build 235 Homo sapiens; Mar 10 2013) or GenBank,
RefSeq according to Entrez Gene,
DOTS (version 10), and/or AceView, transcript ids from Ensembl with links to UCSC,
exon structure from GeneLoc, alternative splicing isoforms according to ASD and/or ECgene,
RNAi Products from EMD Millipore,
siRNAs from OriGene, QIAGEN, shRNA from OriGene, microRNA from QIAGEN,
Tagged/untagged cDNA clones from OriGene, SwitchGear Genomics, GenScript, DNA2.0, Vector BioLabs, Primers from OriGene, SABiosciences, and/or QIAGEN )
About This Section

REFSEQ mRNAs for FOXH1 gene: 
NM_003923.2  

Unigene Cluster for FOXH1:

Forkhead box H1
Hs.708365  [show with all ESTs]
Unigene Representative Sequence: NM_003923
2 Ensembl transcripts including schematic representations, and UCSC links where relevant:
ENST00000377317(uc003zdc.3) ENST00000525197

miRNA
Products:
     
Browse 3'-UTR reporter clones for miRNA target validation
Browse OriGene MicroRNA Expression Plasmids
QIAGEN Custom miScript Target Protector blocks miRNA-binding site of human, mouse, rat FOXH1
7 QIAGEN miScript miRNA Assays for microRNAs that regulate FOXH1:
hsa-miR-18a hsa-miR-361-3p hsa-miR-3134 hsa-miR-1193 hsa-miR-18b hsa-miR-452 hsa-miR-4287
Browse SwitchGear 3'UTR luciferase reporter plasmids
Inhib. RNA
Products:
     
Browse for Gene Knock-down Tools from EMD Millipore
OriGene 29mer shRNA kits in GFP-retroviral vector in human, mouse, rat for FOXH1 (see all 4)
OriGene shRNA RFP: FOXH1
OriGene siRNA: FOXH1
QIAGEN FlexiTube/FlexiPlate siRNA for gene silencing in human, mouse, rat FOXH1
Clone
Products:
     
OriGene Myc/DDK tagged cDNA clones in CMV expression vector in human, mouse, rat for FOXH1 (see all 2)
OriGene untagged cDNA clones in CMV expression vector in human, mouse, rat for FOXH1
OriGene custom cloning services – gene synthesis, subcloning, mutagenesis, variant library, vector shuttling 
GenScript: all cDNA clones in your preferred vector: FOXH1 (NM_003923)
DNA2.0 Custom Codon Optimized Gene Synthesis Service for FOXH1
Vector BioLabs ready-to-use adenovirus/AAV for human, mouse, rat FOXH1 
Primer
Products:
    
OriGene genome-wide validated SYBR primer pairs in human, mouse, rat for FOXH1
Browse OriGene validated miRNA SYBR primer pairs
SABiosciences RT2 qPCR Primer Assay in human, mouse, rat FOXH1
  QIAGEN QuantiTect SYBR Green Assays in human, mouse, rat FOXH1
  QIAGEN QuantiFast Probe-based Assays in human, mouse, rat FOXH1

Additional cDNA sequence: 

AF076292.1 BC051376.1 BC065377.1 

2 DOTS entries:

DT.97785833  DT.40118402 

24 AceView cDNA sequences:

AI632666 BC065377 AA548116 AI636647 BC051376 AI699939 AW235176 NM_003923 
BE550635 AW451014 AI651640 CD048780 AF076292 AI631625 BE829294 AI916797 
BE504812 BU855499 BF057145 H14209 BU859593 AI917314 AA218611 BF987037 

GeneLoc Exon Structure

2 Alternative Splicing Database (ASD) splice patterns (SP) for FOXH1    About this scheme

ExUns: 1a · 1b ^ 2a · 2b ^ 3a · 3b
SP1:                                    
SP2:              -                     


ECgene alternative splicing isoforms for FOXH1

(RNA expression data according to H-InvDB, NONCODE, miRBase, and RNAdb, Expression images according to data from BioGPS, Illumina Human BodyMap, and CGAP SAGE, Sets of similar genes according to GeneDecks, in vivo and in vitro expression data from LifeMap Discovery™, plus additional links to Genevestigator, and/or SOURCE, and/or BioGPS, and/or UniProtKB,
PCR Arrays from SABiosciences, Primers from OriGene, SABiosciences, and/or QIAGEN, In Situ Hybridization Assays from Advanced Cell Diagnostics)
About This Section

FOXH1 expression in normal human tissues (normalized intensities)
See probesets specificity/sensitivity at GeneAnnot
About this imageBioGPS
CGAP TAG: GTCCTGGTGG

Microarray
RNAseq (Illumina Body Map)
(100×FPKM)½
SAGE (Serial Analysis of Gene Expression)

About this image

FOXH1 expression in embryonic tissues and stem cells
Expression by the Database of Embryonic development, Stem cell research, and Regenerative medicine    About this table
10/11 LifeMap In Vivo Development Anatomical Compartments/Cells (see all 11
Tissue Anatomical Compartment CellCategory (developmental path)
HeartMyocardiumCardiomyocytesMyocardium
HeartOutflow TractCardiomyocytesMyocardium
HeartRight VentricleCardiomyocytesMyocardium
HeartCardiac CrescentCardiac Crescent CellsMyocardium
HeartHeart TubeHeart Tube CellsMyocardium
HeartPrimitive Heart TubePrimitive Heart Tube CellsMyocardium
EpiblastEpiblastEpiblast CellsEarly Embryo
HypoblastHypoblastHypoblast CellsExtraembryonic Tissues
HypoblastVisceral EndodermEarly Distal Visceral Endoderm CellsExtraembryonic Tissues, Yolk Sac
Inner Cell MassInner Cell MassInner Cell Mass CellsEarly Embryo
Expression: Positive    Negative     Selective marker
Experimental details: Curated     Microarrays     In-situ hybridization
Stem Cell Differentiation: 1 LifeMap Cell 
NameCategory
Definitive endoderm-like cells (A scalable, suspensi...)

See FOXH1 Protein Expression from SPIRE MOPED and PaxDB
Genevestigator expression for FOXH1

SOURCE GeneReport for Unigene cluster: Hs.708365

UniProtKB/Swiss-Prot: FOXH1_HUMAN, O75593
Tissue specificity: Ubiquitous

    SABiosciences Custom PCR Arrays for FOXH1
Primer
Products:
OriGene genome-wide validated SYBR primer pairs in human, mouse, rat for FOXH1
Browse OriGene validated miRNA SYBR primer pairs
SABiosciences RT2 qPCR Primer Assay in human, mouse, rat FOXH1
QIAGEN QuantiTect SYBR Green Assays in human, mouse, rat FOXH1
QIAGEN QuantiFast Probe-based Assays in human, mouse, rat FOXH1
In Situ
Assay Products:
 

 
Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for FOXH1

(Orthologs according to 1,2HomoloGene (2older version, for species not in 1newer version), 3euGenes, 4SGD , 5MGI Mar 06 2013, with possible further links to Flybase and/or WormBase, and/or 6Ensembl pan taxonomic compara , Gene Trees according to Ensembl and TreeFam)
About This Section

This gene was present in the common ancestor of animals.

Orthologs for FOXH1 gene from 4/11 species (see all 11)    About this table
Organism Taxonomic
classification
Gene Description Human
Similarity
Orthology
Type
Details
lizard
(Anolis carolinensis)
Reptilia FOXH16
--
34(a)
1 ↔ 1
GL343750.1(234845-237885)
African clawed frog
(Xenopus laevis)
Amphibia LOC3980702 forkhead activin signal transducer 1 73.05(n)    U70980.1 
zebrafish
(Danio rerio)
Actinopterygii foxh12 forkhead box H1 71.62(n)   57930  AF263000.1 
worm
(Caenorhabditis elegans)
Secernentea fkh-66
ForKHead transcription factor family member (fkh-6...
16(a)
1 → many
II(4379886-4383290)


ENSEMBL Gene Tree for FOXH1 (if available)
TreeFam Gene Tree for FOXH1 (if available) 

(Paralogs according to 1HomoloGene,
2Ensembl, and 3SIMAP, Pseudogenes according to 4Pseudogene.org Build 68)
About This Section
Paralogs for FOXH1 gene
1 SIMAP similar gene for FOXH1 using alignment to 2 protein entries:     FOXH1_HUMAN (see all proteins):
FOXA1

FOXH1 for paralogs           About GeneDecksing


2 Pseudogenes.org Pseudogenes for FOXH1
PGOHUM00000243244 PGOHUM00000236348


(SNPs/Variants according to the 1NCBI SNP Database, 2Ensembl, 3PupaSUITE, UniProtKB, and DNA2.0, Linkage Disequilibrium by HapMap, Structural Variations(CNVs/InDels/Inversions) from the Database of Genomic Variants, Mutations from the Human Gene Mutation Database (HGMD) and the Locus Specific Mutation Databases (LSDB), Blood group antigen gene mutations by BGMUT, Resequencing Primers from QIAGEN, Cancer Mutation PCR Arrays and Assays and Copy Number PCR Arrays from SABiosciences)
About This Section

10/107 NCBI SNPs in FOXH1 are shown (see all 107    About this table
Genomic DataTranscription Related DataAllele Frequencies
SNP IDValidClinical
significance
Chr 8 posSequence#AA
Chg
TypeMore#Allele
freq
PopTotal
sample
More
----------
rs1839464981,2
--145698909(+) CCAGAC/GTCACC 2 -- ds5001 ut310--------
rs1888878951,2
--145698921(+) CTCCAC/TCTCCG 2 -- ds5001 ut310--------
rs743609101,2
F,--145699310(+) GTGACG/AGCTGG 2 -- ut311Minor allele frequency- A:0.02EA 120
rs117816401,2
C,F,H,--145699388(+) TCCTGC/TAGCTT 2 -- ut314Minor allele frequency- T:0.01NS NA 280
rs1483895541,2
--145699449(+) GCCCAC/GCTGGG 2 -- ut310--------
rs1929075791,2
--145699566(+) TCCCTA/GTCAAC 2 -- int1 ut310--------
rs27211761,2
C,H,--145699601(+) AGGAGC/TGGCCC 2 -- int1 ut3112Minor allele frequency- T:0.09WA NA CSA EA 375
rs2019815291,2
--145699620(+) AGAGCC/TTCACA 2 -- ut31 int10--------
rs78334041,2
C,F,H,--145699642(+) GAGAGC/TAGCCA 3 L int1 syn1 ese36Minor allele frequency- T:0.02NS NA WA 4374
rs1427629181,2
F--145699663(+) GGGGCC/TGCCAG 3 A syn1 int11Minor allele frequency- T:0.00NA 4178

HapMap Linkage Disequilibrium report for FOXH1 (145698795 - 145701718 bp)
Structural Variations (Copy Number Variations, Insertions/Deletions, Inversions)
Database of Genomic Variants (DGV): 4 variations for FOXH1
     4 CNVs: 4613 23292 53129 30306
Human Gene Mutation Database (HGMD): FOXH1

SABiosciences Cancer Mutation PCR Assays
QIAGEN SeqTarget long-range PCR primers in human, mouse, rat for resequencing FOXH1
DNA2.0 Custom Variant and Variant Library Synthesis for FOXH1

(in which this Gene is Involved, According to MalaCards, OMIM, UniProtKB, the University of Copenhagen DISEASES database, Genatlas, GeneTests, GAD, HuGE Navigator, and/or TGDB.)
About This Section

FOXH1 for disorders           About GeneDecksing

OMIM gene information: 603621    OMIM disorders: --

7 diseases for FOXH1:    About MalaCards
friedreich ataxia    angioedema    holoprosencephaly    prostate cancer
ataxia    prostatitis    glioblastoma

1 disease from the University of Copenhagen DISEASES database for FOXH1:
Angioedema
Human Genome Epidemiology (HuGE) Navigator: FOXH1 (2 documents)

Export disorders for FOXH1 gene to outside databases

(in PubMed. Associations of this gene to articles via 1Entrez Gene, 2UniProtKB/Swiss-Prot, 3HGNC, 4GAD, 5PharmGKB, 6HMDB, 7DrugBank, 8UniProtKB/TrEMBL, 9 Novoseek, and/or 10fRNAdb)
About This Section

PubMed articles for FOXH1 gene, integrated from 9 sources (see all 46):
(articles sorted by number of sources associating them with FOXH1)
    Utopia: connect your pdf to the dynamic
world of online information

  1. Characterization of human FAST-1, a TGF beta and activin signal transducer. (PubMed id 9702198)1, 2, 3, 9 Zhou S.... Vogelstein B. (1998)
  2. Expression of the FAST-1 transcription factor in coronary artery transplant vasculopathy and activated vascular smooth muscle cells. (PubMed id 15737749)1, 9 Kelemen S.F....Autieri M.V. (2005)
  3. BF-1 interferes with transforming growth factor beta signaling by associating with Smad partners. (PubMed id 10938097)1, 9 Dou C....Lai E. (2000)
  4. Selective inhibition of TGF-beta responsive genes by Smad-interacting peptide aptamers from FoxH1, Lef1 and CBP. (PubMed id 15750622)1, 9 Cui Q....Hoffmann F.M. (2005)
  5. HEB and E2A function as SMAD/FOXH1 cofactors. (PubMed id 21828274)1 Yoon S.J....Baker J.C. (2011)
  6. An atlas of combinatorial transcriptional regulation in mouse and man. (PubMed id 20211142)1 Ravasi T....Hayashizaki Y. (2010)
  7. Maternal genes and facial clefts in offspring: a comp rehensive search for genetic associations in two population-based cleft studies from Scandinavia. (PubMed id 20634891)1 Jugessur A....Murray J.C. (2010)
  8. PKA-mediated stabilization of FoxH1 negatively regula tes ERalpha activity. (PubMed id 19711044)1 Yum J....Yeo C.Y. (2009)
  9. Forkhead box H1 (FOXH1) sequence variants in ventricu lar septal defect. (PubMed id 19525021)1 Wang B....Ma X. (2009)
  10. SMAD proteins of oligodendroglial cells regulate trans cription of JC virus early and late genes coordinately with the Tat protein of h uman immunodeficiency virus type 1. (PubMed id 19420158)1 Stettner M.R....Johnson E.M. (2009)

(in PubMed, OMIM, and NCBI Bookshelf)
About This Section
 ANDOR
Aliases
Free Text  

  Query String
PubMed
OMIM
NCBI Bookshelf
  (Note: In FireFox, select the above section and copy using Ctrl-C)

(According to Entrez Gene, HGNC, AceView, euGenes, Ensembl, miRBase, ECgene, Kegg, and/or H-InvDB)
About This Section
Entrez Gene: 8928 HGNC: 3814 AceView: FOXH1 Ensembl:ENSG00000160973 euGenes: HUgn8928
ECgene: FOXH1 H-InvDB: FOXH1

(According to HUGE)
About This Section
  --

(According to PharmGKB, ATLAS, HORDE, IMGT, LEIDEN, UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL,
Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot)
About This Section
NameDescription
PharmGKB entry for FOXH1 Pharmacogenomics, SNPs, Pathways

(Patent information from GeneIP,
Licensable technologies from WIS Yeda, Salk, Tufts,
IP news from LifeMap Sciences, Inc.)
About This Section
Patent Information for FOXH1 gene:
Search GeneIP for patents involving FOXH1

GeneCards and IP:
Japan Patent Office Licenses GeneCards     European Patent Office Licenses GeneCards     Improving the IP Search



(Antibodies, recombinant proteins, and assays from EMD Millipore, R&D Systems, OriGene, QIAGEN, GenScript, Cell Signaling Technology, SABiosciences, Novus Biologicals, Sino Biological, Enzo Life Sciences, Abcam, ProSpec, Uscn, Thermo Fisher Scientific, Gene Editing from DNA2.0, Clones from EMD Millipore, OriGene, GenScript, Sino Biological, DNA2.0, SwitchGear Genomics, Vector BioLabs, Cell lines from GenScript and LifeMap BioReagents, PCR Arrays from SABiosciences, Drugs and/or compounds from EMD Millipore, Tocris Bioscience, and/or Enzo Life Sciences),
In Situ Hybridization Assays from
Advanced Cell Diagnostics
About This Section

 Browse Small Molecules at EMD Millipore
 Browse Kits and Assays available from EMD Millipore
 EMD Millipore Mono- and Polyclonal Antibodies for the study of FOXH1
 Browse for Gene Knock-down Tools from EMD Millipore
 Browse Clones for the Expression of Recombinant Proteins Available from EMD Millipore
 Browse Purified and Recombinant Proteins at EMD Millipore
 
 EMD Millipore Custom Antibody & Bulk Services
 EMD Millipore Preclinical / Clinical Development Services
 EMD Millipore Immunoassay Services
 EMD Millipore Target Screening & Profiling Services

  
 Antibodies for FOXH1 (FoxH1)   Browse Cell Culture Products  
 Browse ELISAs   Browse Flow Cytometry Kits  
 Browse Primer Pairs   Browse Kinase Activity Assays/Reagents  
 Browse ELISpot Kits/Development Modules   Browse TFB/Immunoprecipitation Assays  
 Browse Apoptosis Detection Kits/Reagents   Browse Ubiquitin Proteasome Pathway (UPP) Assay Kits/Reagents  
 Browse DNA Damage/Repair Kits/Reagents   Browse Multiplex/Array Assay Kits/Reagents  
 Browse Cell Selection/Detection Kits/Reagents   Browse Secondary Antibodies/Controls/Staining Reagents  
 Browse Phosphatase Activity Assays/Reagents   Browse Recombinant/Natural Proteins  
 Browse OriGene Antibodies   OriGene shRNA RFP for FOXH1  
 OriGene 29mer shRNA kits in GFP-retroviral vector in human, mouse, rat for FOXH1   OriGene genome-wide validated SYBR primer pairs in human, mouse, rat for FOXH1  
 OriGene Protein Over-expression Lysate for FOXH1   Browse OriGene Fluorogenic Cell Assay Kits  
 OriGene siRNA for FOXH1   Browse 3'-UTR reporter clones for miRNA target validation  
 OriGene untagged cDNA clones in CMV expression vector in human, mouse, rat for FOXH1   OriGene Myc/DDK tagged cDNA clones in CMV expression vector in human, mouse, rat for FOXH1  
 Browse OriGene GFP tagged cDNA clones in CMV expression vector   Browse OriGene MicroRNA Expression Plasmids  
 Browse OriGene basic RS shRNAs   Browse OriGene validated miRNA SYBR primer pairs  
 Browse OriGene full length recombinant human proteins expressed in human HEK293 cells   OriGene custom cloning services - gene synthesis, subcloning, mutagenesis, variant library, vector shuttling  
 OriGene Custom Antibody Services for FOXH1   OriGene Custom Protein Services for FOXH1  
 OriGene Custom Immunoassay Development  

 
 
 QIAGEN Custom miScript Target Protector blocks miRNA-binding site of in human, mouse, rat FOXH1
 QIAGEN SeqTarget long-range PCR primers in human, mouse, rat for resequencing FOXH1
 QIAGEN PyroMark CpG Assay predesigned Pyrosequencing DNA Methylation assays in human, mouse, rat FOXH1
 QIAGEN FlexiTube/FlexiPlate siRNA for gene silencing in human, mouse, rat FOXH1
 QIAGEN QuantiFast Probe-based Assays in human, mouse, rat FOXH1
 QIAGEN QuantiTect SYBR Green Assays in human, mouse, rat FOXH1
 GenScript Custom Purified and Recombinant Proteins Services for FOXH1 GenScript cDNA clones with any tag delivered in your preferred vector for FOXH1
 GenScript Custom Assay Services for FOXH1 GenScript Custom Superior Antibodies Services for FOXH1
 GenScript Custom overexpressing Cell Line Services for FOXH1 CloneReady with Over 120,000 Genes
 Gene Synthesis: Any Gene in Any Vector Vector-based siRNA and miRNA, Ready for Transfection
 Gene Mutant Library, Variants up to 10^11 Plasmid Preparation
 Custom Peptide Services
 Search for Antibodies & Assays

 Regulatory tfbs in FOXH1 promoter
 Search Chromatin IP Primers for FOXH1
 RT2 qPCR Primer Assay in human, mouse, rat FOXH1
 GNC Network for FOXH1
 SABiosciences PCR Arrays including human, mouse, rat FOXH1
 Search Tocris compounds for FOXH1
 Browse Sino Biological Proteins and Antibodies
 Browse Sino Biological cDNA Clones
 Antibodies/Proteins Production Services
 Rabbit Monoclonal Antibody Platform
 Bulk Purchasing
 Search www.enzolifesciences.com for proteins, assays, substrates, inhibitors & antibodies
 Novus Tissue Slides
 FOXH1 antibodies
 FOXH1 lysates
 Search for Antibodies for FOXH1 at Abcam
 See all of Abcam's Antibodies, Kits and Proteins for FOXH1
 Custom Antibody / Protein Production Service
 Bulk Purchasing
 Advantages of Rabbit Monoclonal antibodies
 Abcam protocols and scientific support
 Browse ProSpec Recombinant Proteins




 FOXH1 Proteins, Antibodies, CLIAs, and ELISAs
 Search LifeMap BioReagents cell lines for FOXH1
 Gene Synthesis
 Protein Engineering
 Variant Library Synthesis
 Codon Optimization
 Protein Production and Purification
 Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for FOXH1
 Browse SwitchGear 3'UTR luciferase reporter plasmids for FOXH1
 SwitchGear Promoter luciferase reporter plasmids for FOXH1
 Search ThermoFisher Antibodies for FOXH1
 Vector BioLabs ready-to-use adenovirus/AAV for human, mouse, rat FOXH1
       
GeneCards Homepage - Last full update: 18 Mar 2013 - Incrementals: 21 Mar 2013 , 15 Apr 2013 , 27 Apr 2013

View Random Gene

Category
VWF
(GIFTS: 73)
von Willebrand factor
GIFtS Group
The GeneCards human gene database gene index: 1 3 5 6 A B C D E F G H I J K L M N O P Q R S T U V W X Y Z 


Developed at the Crown Human Genome Center, Department of Molecular Genetics, the Weizmann Institute of Science

Hot genes      Disease genes      FOXH1 gene at Home site.
hostname: 356980-web2.xennexinc.com index build: 100 solr: 1.4