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Aliases & Descriptions for FOLR1
(According to
1 HGNC ,
2 Entrez Gene ,
3 UniProtKB/Swiss-Prot ,
4 UniProtKB/TrEMBL , 5 OMIM , 6 GeneLoc
, and/or 7 Ensembl ,
8 miRBase )About This Section
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Aliases FBP 2 , 3 FOLR 2 , 3 FR-alpha 2 , 3 MOv18 2
Descriptions Adult folate-binding protein 3 Folate receptor 1 2 , 3 Folate receptor, adult 3 KB cells FBP 3 Ovarian tumor-associated antigen MOv18 3 folate binding protein 2 folate receptor 1 (adult) 2
Search outside databases for aliases for FOLR1 genePrevious GC identifers: GC11P074232 GC11P073440 GC11P072123 GC11P071626
Summaries for FOLR1 (According to Entrez Gene ,
Wikipedia's
Gene Wiki ,
UniProtKB/Swiss-Prot ,
and/or
UniProtKB/TrEMBL )
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EntrezGene summary for FOLR1 : The protein encoded by this gene is a member of the folate receptor (FOLR) family. Members of thisgene family have a high affinity for folic acid and for several reduced folic acid derivatives,and mediate delivery of 5-methyltetrahydrofolate to the interior of cells. This gene is composedof 7 exons; exons 1 through 4 encode the 5' UTR and exons 4 through 7 encode the open readingframe. Due to the presence of 2 promoters, multiple transcription start sites, and alternativesplicing of exons, several transcript variants are derived from this gene. These variants differin the lengths of 5' and 3' UTR, but they encode an identical amino acid sequence.[provided by RefSeq] UniProtKB/Swiss-Prot: FOLR1_HUMAN, P15328 Function : Binds to folate and reduced folic acid derivatives and mediates delivery of5-methyltetrahydrofolate to the interior of cells
Gene Wiki entry for FOLR1 (Folate_receptor_1)
Genomic Location for FOLR1
(According to
GeneLoc and/or
HGNC , and/or
Entrez Gene (NCBI build 36) ,
and/or miRBase ,
Genomic Views according to
UCSC and
Ensembl ,
Transcription factor binding sites according to
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Genomic View : UCSC Golden Path with GeneCards custom track Transcription factor binding sites upstream to the FOLR1 gene Entrez Gene cytogenetic band: 11q13.3-q14.1 Ensembl cytogenetic band: 11q13.4 HGNC cytogenetic band: 11q13.3-q14.1 FOLR1 Gene in genomic location: bands according to Ensembl, locations according to
(and/or Entrez Gene and/or Ensembl if different) GeneLoc gene densities for chromosome 11 GeneLoc Exon Structure
GeneLoc location for GC11P071578:
(about GC identifiers )
Start:
71,578,250 bp from pter
End:
71,585,014 bp from pter
Size:
6,765 bases
Orientation:
plus strand
RefSeq DNA sequence: NC_000011.8 NT_033927.7 Proteins for FOLR1
(According to
1 UniProtKB ,
and/or Ensembl ,
Phosphorylation sites according to 2 Phosphosite ,
RefSeq according to NCBI ,
PDB rendering according to OCA and/or Proteopedia ,
Recombinant Proteins
from Invitrogen ,
Millipore ,
Sigma-Aldrich ,
R&D Systems ,
Enzo Life Sciences ,
Abnova ,
OriGene and/or,
Abcam ,
Biochemical Assays by
Invitrogen ,
Millipore ,
R&D Systems ,
Cell Signaling Technology , and/or
Enzo Life Sciences ,
Ontologies according to Gene
Ontology Consortium 01 Apr 2009 and
Entrez Gene ,
Antibodies by Invitrogen ,
Millipore ,
Sigma-Aldrich ,
R&D Systems ,
Cell Signaling Technology ,
Abcam ,
Abnova , and/or
Novus Biologicals )
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UniProtKB/Swiss-Prot: FOLR1_HUMAN, P15328 (See
protein sequence )Recommended Name: Folate receptor alpha precursor Size : 257 amino acids; 29819 Da
Subcellular location : Cell membrane; Lipid-anchor, GPI-anchor. Secreted (Probable)
Secondary accessions : Q53EW2 Q6FGT8 Q6LC90 Q9UCT2
Post-translational modifications:
Eight disulfide bonds are present (Probable)1
The secreted form is derived from the membrane-bound form either by cleavage of the GPI anchor,or/and by proteolysis catalyzed by a metalloprotease1
REFSEQ proteins (6 alternative transcripts):
NP_000793.1 NP_057936.1 NP_057937.1 NP_057941.1 NP_057942.1 NP_057943.1 ENSEMBL proteins: ENSP00000377281 ENSP00000377284 ENSP00000377286 ENSP00000308137 Human Recombinant Proteins Browse Origene for full length recombinant human proteins expressed in human HEK293 cells 5 Gene Ontology (GO) cellular component terms (links to tree view) :
About this table Antibodies for FOLR1: Assays for FOLR1:
Protein
Domains/ Families for FOLR1(According to InterPro , ProtoNet ,
UniProtKB , and/or BLOCKS ,
Sets of similar genes according to GeneDecks )
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Graphical View of Domain Structure for InterPro Entry P15328 ProtoNet protein and cluster: P15328
1 Blocks protein family : IPB004269 Folate receptor UniProtKB/Swiss-Prot: FOLR1_HUMAN, P15328 Similarity : Belongs to the folate receptor family
Gene Function for FOLR1
(According to MGI Jun 06 2009, UniProtKB ,
IUBMB ,and/or Genatlas ,
shRNA from
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Clones , and
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SYBR primers from OriGene ,
Cell-based Assays from Millipore ,
Ontologies according to Gene Ontology Consortium 01 Apr 2009 via
Entrez Gene .)
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               OriGene 29mer shRNA kit in GFP-retroviral vectors (see all 6 ): NM_016724 Applied Biosystems Silencer ® siRNAs for FOLR1 Sigma-Aldrich siRNA and siRNA Panels for FOLR1 Sigma-Aldrich shRNA for FOLR1 Explore Sigma-Aldrich super-pooled esiRNAs                OriGene GFP tagged cDNA clones in CMV expression vector (see all 6 ): NM_000802                                  Myc/DDK tagged cDNA clones in CMV expression vector (see all 6 ): NM_000802                                  untagged cDNA clones in CMV expression vector (see all 6 ): NM_000802  Primers: Browse
Quantitative PCR Central at Invitrogen for Q-PCR LUX™ Primers               OriGene genome-wide validated SYBR primer pairs: NM_016731 UniProtKB/Swiss-Prot: FOLR1_HUMAN, P15328 Function : Binds to folate and reduced folic acid derivatives and mediates delivery of5-methyltetrahydrofolate to the interior of cells
Genatlas biochemistry entry for FOLR1 :folate receptor 1,adult
11 MGI mutant phenotypes (inferred from 1 allele ) (MGI details for Folr1) :2 Gene Ontology (GO) molecular function terms (links to tree view) :
About this table
Pathways & Interactions for FOLR1
(Pathways according to Invitrogen
(maps by GeneGo ),
Millipore ,
Cell Signaling Technology ,
Sigma-Aldrich ,
KEGG
and/or UniProtKB ,
Sets of similar genes according to GeneDecks ,
Proteins Network according to
SABiosciences ,
Interactions according to 1 UniProtKB ,
2 MINT , and/or
3 STRING ,
with links to IntAct and
Ensembl ,
Ontologies according to Gene Ontology Consortium 01 Apr 2009 via
Entrez Gene .)
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1 Sigma-Aldrich "Your Favorite Gene" Pathway for FOLR1 (Your Favorite Gene powered by Ingenuity) 5/7 Interacting proteins for FOLR1 (ENSP00000308137 3 ) via UniProtKB, MINT, and/or STRING (see all 7
)About this table 3 Gene Ontology (GO) biological process terms (links to tree view) :
About this table
Drugs & Compounds for FOLR1 (Chemical Compounds according to UniProtKB , Enzo Life Sciences ,
Sigma-Aldrich , Tocris Bioscience , and/or
Novoseek and Drugs according to
Enzo Life Sciences and/or
PharmGKB )
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Browse Tocris compounds for FOLR1 10/11 Novoseek chemical compound relationships for FOLR1 gene (see all 11
)
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Transcripts for FOLR1(GenBank/EMBL/DDBJ Accessions according to
Unigene
(Build 219 Homo sapiens; Jun 2 2009) or GenBank , RefSeq according to Entrez Gene ,
DOTS (version 10), and/or
AceView ,
non coding RNAs according to
RNAdb ,
ESTs according to GeneTide ,
exon structure from GeneLoc ,
alternative splicing isoforms according to ASD and/or
ECgene ,
RNAi Products from Invitrogen ,
Millipore , and/or
Abnova ,
siRNAs from Applied Biosystems ,
Sigma-Aldrich ,
shRNA from
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OriGene ,
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               OriGene 29mer shRNA kit in GFP-retroviral vectors (see all 6 ): NM_016724 Sigma-Aldrich siRNA and siRNA Panels for FOLR1 Sigma-Aldrich shRNA for FOLR1 Explore Sigma-Aldrich super-pooled esiRNAs
Applied Biosystems Silencer ® siRNAs: NM_000802 NM_016724 NM_016725 NM_016729 NM_016730 NM_016731
REFSEQ mRNAs for FOLR1 gene (6 alternative transcripts): NM_000802.2 NM_016724.1 NM_016725.1 NM_016729.1 NM_016730.1 NM_016731.2
Applied Biosystems TaqMan ® Gene Expression Assays: NM_000802 NM_016724 NM_016725 NM_016729 NM_016730 NM_016731
               OriGene GFP tagged cDNA clones in CMV expression vector (see all 6 ): NM_000802                                  Myc/DDK tagged cDNA clones in CMV expression vector (see all 6 ): NM_000802                                  untagged cDNA clones in CMV expression vector (see all 6 ): NM_000802  
Additional cDNA sequence: AF000381.2 AK223527.1 BC002947.2 BT007158.1 CR542019.1 CR607460.1 CR613077.1 CR623060.1 J05013.1 M25317.1 M28099.1 S73474.1 U78793.1 U78794.1 X62753.1
5 DOTS entries : DT.100770176 DT.447922 DT.95103787 DT.100770180 DT.100770179
24/185 AceView cDNA sequences (see all 185
):U78793 N29700 M28099 AA488506 NM_000802 BE744857 R24620 AA436422 BI913499 NM_016724 R26895 CB242517 BQ017257 NM_016730 AA425789 AL555980 BC002947 CR542019 AA291206 NM_016729 CR613077 BG328933 BE901231 S73474
highest scoring ESTs for FOLR1 :AF000381 AA132971 AA179594 AA181711 AA182646 AA188982 AA191102 AA191618 AA235638 AA291206
Unigene Cluster for FOLR1: Folate receptor 1 (adult) Hs.73769 [show with all ESTs ] Unigene Representative Sequence: NM_016730 GeneLoc Exon Structure 3 Alternative Splicing Database (ASD) splice patterns (SP) for FOLR1 ExUns: 1a · 1b ^ 2a · 2b ^ 3 ^ 4 ^ 5 ^ 6a · 6b SP1 :     -               SP2 :     -   -             SP3 :                  
About this scheme ECgene alternative splicing isoforms for FOLR1 4 Ensembl transcripts including schematic representations : ENST00000393676
ENST00000393679
ENST00000393681
ENST00000312293
Expression for FOLR1
(Experimental results according to
1 GeneNote
and GNF BioGPS ,
probe sets-to-genes annotations according to
2 GeneAnnot ,
3 GeneTide ,
Sets of similar genes according to GeneDecks ,
Electronic Northern calculations according to data from
UniGene (Build 219 Homo sapiens),
SAGE tags according to
CGAP ,
plus additional links to
SOURCE , and/or
GNF
BioGPS , and/or
EXPOLDB , and/or
UniProtKB ,
Expression Assays from
Applied Biosystems
)
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FOLR1 expression in normal and diseased human tissues Applied Biosystems TaqMan ® Gene Expression Assays for FOLR1 1 / 2 / 3
5 probe-sets matching FOLR1 gene Data from
(Publications) and GNF BioGPS About these images About these images CGAP SAGE TAG: GTCGGGCCTCSOURCE GeneReport for Unigene cluster: Hs.73769 Expression variation in blood from EXPOLDB for FOLR1
UniProtKB/Swiss-Prot: FOLR1_HUMAN, P15328 Tissue specificity : Exclusively expressed in tissues of epithelial origin. Expression is increasedin malignant tissues. Expressed in kidney, lung and cerebellum
Orthologs for FOLR1
(Orthologs according to
1,2 HomoloGene (2 older version, for species not in 1 newer version),
3 euGenes ,
4 SGD
and/or
5 MGI Jun 06 2009,
with possible further links to
Flybase
and/or
WormBase ,
Gene Trees according to Ensembl )
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Orthologs for FOLR1 gene from 5/7 species (see all 7
)
About this table Species with no ortholog for FOLR1 ENSEMBL Gene Tree for FOLR1 Paralogs for FOLR1 (Paralogs according to 1 HomoloGene and 2 Ensembl , Pseudogenes according to 3 Pseudogene.org )About This Section
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Paralogs for FOLR1 gene FOLR3 2 FOLR4 2 FOLR2 2
SNPs/Variants for FOLR1 (According to the
1 NCBI SNP Database ,
2 Ensembl ,
3 PupaSUITE , and
UniProtKB ,
Linkage Disequilibrium by HapMap ,
Genotyping Reagents from
Applied Biosystems )
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HapMap Linkage Disequilibrium images for FOLR1 (up to first 250kb)
Disorders & Mutations for FOLR1
(in which this Gene is Involved, According to
OMIM, UniProtKB ,
Novoseek , PharmGKB ,
Genatlas , GeneTests ,
Blood group antigen gene mutations by BGMUT ,
HGMD, GAD ,
HuGE Navigator ,
BCGD ,
and/or TGDB .)
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OMIM: 136430
10/25 Novoseek disease relationships for FOLR1 gene (see all 25
)
Disease
Score
Articles
PubMed IDs for Articles with Shared Sentences (# sentences)
ovarian carcinoma
70.70
42
9426700 (4), 9218736 (4), 8242637 (3), 9500461 (2) (see all 19 )
folate deficiency
69.66
4
9301457 (2), 8126512 (1), 15641086 (1)
leukemia l1210
56.21
1
7579732 (1)
ovarian cancer
55.70
18
1717147 (2), 16908932 (2), 9583724 (1), 17062694 (1) (see all 13 )
anencephaly
44.62
1
17035141 (1)
tumors
37.00
53
18222534 (5), 16453285 (4), 12874029 (3), 9178098 (2) (see all 24 )
choriocarcinoma
35.17
5
8061055 (2)
spina bifida
34.56
1
10234517 (1)
cancer
31.39
21
10632363 (3), 18318652 (2), 8920973 (1), 8595169 (1) (see all 12 )
ovarian neoplasms
31.36
1
10542886 (1)
About this table Human Gene Mutation Database : FOLR1 Genetic Association Database: FOLR1 Human Genome Epidemiology Navigator: FOLR1 (11 documents)
Medical News for FOLR1 (Possibly Related Articles in
Doctor's Guide )
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--
Publications for FOLR1 (in
PubMed .
Associations of this gene to articles via
1 Novoseek ,
2 HGNC ,
3 Entrez Gene ,
4 UniProtKB/Swiss-Prot ,
5 UniProtKB/TrEMBL ,
6 GAD , and/or
7 PharmGKB )
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10/190 PubMed articles for FOLR1 gene (see all 190
): Folate-binding protein is a marker for ovarian cancer. (PubMed id 1717147) 1, 2, 3, 4 Campbell I.G.... Trowsdale J. (1991) Polymorphisms and mutations of the folate receptor-alpha gene and risk of gastric cancer in a Chinese population. (PubMed id 15754024) 1, 3, 6 Zhang G....Lu Y.Y. (2005) Cloning of a tumor-associated antigen: MOv18 and MOv19 antibodies recognize a folate-binding protein. (PubMed id 1840502) 1, 3, 4 Coney L.R.... Zurawski V.R. Jr. (1991) Novel insertion and deletion mutations in the 5'-UTR of the folate receptor-alpha gene: an additional contributor to hyperhomocysteinemia? (PubMed id 14972645) 1, 3, 6 Nilsson T.K. and Borjel A.K. (2004) Modification-specific proteomics of plasma membrane proteins: identification and characterization of glycosylphosphatidylinositol- anchored proteins released upon phospholipase D treatment. (PubMed id 16602701) 3, 4 Elortza F.... Jensen O.N. (2006) The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PubMed id 15489334) 3, 4 Gerhard D.S....Malek J. (2004) Proteomic analysis of glycosylphosphatidylinositol-anchored membrane proteins. (PubMed id 14517339) 3, 4 Elortza F....Jensen O.N. (2003) Lack of association between mutations in the folate receptor-alpha gene and spina bifida. (PubMed id 9545095) 3, 6 Barber R.C....Finnell R.H. (1998) The divergent 5' termini of the alpha human folate receptor (hFR) mRNAs originate from two tissue-specific promoters and alternative splicing: characterization of the alpha hFR gene structure. (PubMed id 9063895) 3, 4 Elwood P.C.... Chung K.N. (1997) Preferred sites of glycosylphosphatidylinositol modification in folate receptors and constraints in the primary structure of the hydrophobic portion of the signal. (PubMed id 7578066) 3, 4 Yan W. and Ratnam M. (1995)
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Genome Databases showing FOLR1
(According to
Entrez Gene ,
HGNC ,
AceView ,
euGenes ,
Ensembl ,
miRBase ,
ECgene ,
and/or
H-InvDB )
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Other Databases showing FOLR1
(According to HUGE )
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Specialized Databases showing FOLR1 (According to ATLAS , HORDE , IMGT , MTDB, LEIDEN , UniProtKB/Swiss-Prot , and/or UniProtKB/TrEMBL ,Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot )About This Section
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-- Services for FOLR1 (Reagents available from Applied Biosystems , Antibodies and assays by Cell
Signaling Technology , Abcam , Novus Biologicals ,Sigma-Aldrich , R&D Systems , Millipore , Abnova , and/or Invitrogen , Clones available from OriGene ,and/or Invitrogen , Drugs and/or compounds by Sigma-Aldrich , Enzo Life Sciences , and/or Tocris Bioscience )About This Section
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