Set Analyses:
Advanced Search

Advanced Search

 
Search By
Section (entire)
for


 
or upload a file of gene symbols


Category   Symbol Source: HGNC EntrezGene Ensembl GeneCards RNA genes CroW21
GIFtS

FNTB Gene

protein-coding   GIFtS: 62
GCID: GC14P065454

farnesyltransferase, CAAX box, beta

 Explore 1 disease affiliated with
FNTB via our new
 Human Malady Compendium 
Biological research products
for FNTB
    

(According to 1HGNC, 2Entrez Gene,
3UniProtKB/Swiss-Prot, 4UniProtKB/TrEMBL, 5OMIM, 6GeneLoc, 7Ensembl, 8DME, 9miRBase, and/or 10fRNAdb)
About This Section

Aliases
Farnesyltransferase, CAAX Box, Beta1 2     CAAX Farnesyltransferase Subunit Beta2 3
FPTB1 2     EC 2.5.1.583 8
Ras Proteins Prenyltransferase Subunit Beta2 3     Protein Farnesyltransferase Subunit Beta2
FTase-Beta1     

External Ids:    HGNC: 37851   Entrez Gene: 23422   Ensembl: ENSG000002573657   OMIM: 1346365   UniProtKB: P493563   

Export aliases for FNTB gene to outside databases

Previous GC identifers: GC14P062781 GC14P059247 GC14P063443 GC14P064523 GC14P065381


(According to Entrez Gene, Tocris Bioscience, Wikipedia's Gene Wiki, PharmGKB,
UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL)
About This Section

UniProtKB/Swiss-Prot: FNTB_HUMAN, P49356
Function: Catalyzes the transfer of a farnesyl moiety from farnesyl pyrophosphate to a cysteine at the fourth position
from the C-terminus of several proteins. The beta subunit is responsible for peptide-binding

Gene Wiki entry for FNTB


(According to GeneLoc and/or HGNC, and/or
Entrez Gene (NCBI build 37),
and/or miRBase,
Genomic Views according to UCSC (hg19) and Ensembl (release 69), Regulatory elements and Epigenetics data according to QIAGEN, SABiosciences, and/or SwitchGear Genomics)
About This Section
RefSeq DNA sequence:
NC_000014.8  NC_018925.1  NT_026437.12  
Regulatory elements:
   SABiosciences Regulatory transcription factor binding sites in the FNTB gene promoter:
         RFX1   C/EBPbeta   USF1   FOXF2   Egr-1   Nkx2-2   Arnt   USF-1   c-Myb   Pax-4a   
         Other transcription factors

SwitchGear Promoter luciferase reporter plasmidFNTB promoter sequence
   Search SABiosciences Chromatin IP Primers for FNTB

Epigenetics:
QIAGEN PyroMark CpG Assay predesigned Pyrosequencing DNA Methylation assays in human, mouse, rat FNTB


Genomic Location:
Genomic View: UCSC Golden Path with GeneCards custom track

Entrez Gene cytogenetic band: 14q23.3   Ensembl cytogenetic band:  14q23.3   HGNC cytogenetic band: 14q23.3

FNTB Gene in genomic location: bands according to Ensembl, locations according to (and/or Entrez Gene and/or Ensembl if different)
FNTB gene location

GeneLoc information about chromosome 14         GeneLoc Exon Structure

GeneLoc location for GC14P065454:  view genomic region     (about GC identifiers)

Start:
65,453,438 bp from pter      End:
65,529,370 bp from pter
Size:
75,933 bases      Orientation:
plus strand

(According to 1UniProtKB, HORDE, neXtProt, Ensembl, and/or Reactome, Modification sites according to 2PhosphoSitePlus, Specific Peptides from DME, Protein expression images according to data from SPIRE MOPED and PaxDb, RefSeq according to NCBI, PDB rendering according to OCA and/or Proteopedia, Recombinant Proteins from EMD Millipore, R&D Systems, GenScript, Enzo Life Sciences, OriGene, Novus Biologicals, Sino Biological, ProSpec, and/or Uscn,
Biochemical Assays by EMD Millipore, R&D Systems, OriGene, GenScript, Cell Signaling Technology, Enzo Life Sciences, and/or Uscn, Ontologies according to Gene Ontology Consortium 01 Mar 2013 and Entrez Gene, Antibodies by EMD Millipore, R&D Systems, GenScript, Cell Signaling Technology, OriGene, Novus Biologicals, Thermo Fisher Scientific, Abcam, and/or Uscn)
About This Section

UniProtKB/Swiss-Prot: FNTB_HUMAN, P49356 (See protein sequence)
Recommended Name: Protein farnesyltransferase subunit beta  
Size: 437 amino acids; 48774 Da
Cofactor: Binds 1 zinc ion per subunit
Subunit: Heterodimer of an alpha and a beta subunit
6/14 PDB 3D structures from and Proteopedia for FNTB (see all 14):
1JCQ (3D)        1LD7 (3D)        1LD8 (3D)        1MZC (3D)        1S63 (3D)        1SA4 (3D)    
Secondary accessions: B2RDX6

Explore the universe of human proteins at neXtProt for FNTB: NX_P49356

Post-translational modifications:

  • View modification sites using PhosphoSitePlus2
  • View neXtProt modification sites for NX_P49356

  • 4/7 DME Specific Peptides for FNTB (P49356) (see all 7)
     EAHGGYT  CPPSSSP  YHTCYCL  NKLVDGCY 

    FNTB Protein expression data from MOPED and PaxDb:    About this image 
    Estimated protein expression log10 (pmol).

    REFSEQ proteins: NP_002019.1  
    ENSEMBL proteins: 
     ENSP00000246166   ENSP00000451722  

    Human Recombinant Protein Products: 
    Browse Purified and Recombinant Proteins at EMD Millipore
    Browse R&D Systems for human recombinant proteins
    Browse recombinant and purified proteins available from Enzo Life Sciences
    OriGene Purified Protein: FNTB
    OriGene Protein Over-expression Lysate: FNTB
    OriGene Custom Protein Services for FNTB 
    GenScript Custom Purified and Recombinant Proteins Services for FNTB
    Novus Biologicals FNTB Proteins
    Novus Biologicals FNTB Lysate
    Browse Sino Biological Recombinant Proteins
    Browse ProSpec Recombinant Proteins
    Browse Proteins at Uscn

    Gene Ontology (GO): 3 cellular component terms (GO ID links to tree view):    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0005875microtubule associated complex IDA19228685
    GO:0005965protein farnesyltransferase complex IEA--
    GO:0043234protein complex ----


    FNTB for ontologies           About GeneDecksing



    FNTB Antibody Products: 
    EMD Millipore Mono- and Polyclonal Antibodies for the study of FNTB
    Browse R&D Systems for Antibodies
    OriGene Antibodies (see all 2): FNTB
    OriGene Custom Antibody Services for FNTB 
    GenScript Custom Superior Antibodies Services for FNTB
    Novus Biologicals FNTB Antibodies
    Abcam antibodies for FNTB 
    Browse Antibodies at Uscn
    ThermoFisher Antibodies for FNTB

    Assay Products for FNTB: 
    Browse Kits and Assays available from EMD Millipore
    OriGene Custom Immunoassay Development
    Browse OriGene Fluorogenic Cell Assay Kits
    Browse R&D Systems for biochemical assays
    GenScript Custom Assay Services for FNTB
    Browse Enzo Life Sciences for kits & assays
    Browse ELISAs and CLIAs at Uscn


    (According to InterPro, ProtoNet, UniProtKB, and/or BLOCKS, Sets of similar genes according to GeneDecks)
    About This Section

    FNTB for domains           About GeneDecksing

    3 InterPro domains/families:
     IPR026872 FTB
     IPR008930 Terpenoid_cyclase/PrenylTrfase
     IPR001330 Prenyltrans

    Graphical View of Domain Structure for InterPro Entry P49356

    ProtoNet protein and cluster: P49356

    1 Blocks protein family: IPB001330 Prenyltransferase/squalene oxidase

    UniProtKB/Swiss-Prot: FNTB_HUMAN, P49356
    Similarity: Belongs to the protein prenyltransferase subunit beta family
    Similarity: Contains 5 PFTB repeats


    (According to 1UniProtKB, Genatlas, LifeMap Discovery™, IUBMB, and/or 2DME, Human phenotypes from GenomeRNAi, Animal models from MGI Mar 06 2013,
    bound targets from SABiosciences, miRNA Gene Targets from miRTarBase shRNA from OriGene, RNAi from EMD Millipore, siRNAs from OriGene, QIAGEN, microRNA from QIAGEN, Gene Editing from DNA2.0, Clones from EMD Millipore, OriGene, SwitchGear Genomics, GenScript, Sino Biological, DNA2.0, and Vector BioLabs, Cell Lines from GenScript, LifeMap BioReagents, In Situ Hybridization Assays from Advanced Cell Diagnostics, Ontologies according to Gene Ontology Consortium 01 Mar 2013 via Entrez Gene.)
    About This Section

    Function Summary:

         UniProtKB/Swiss-Prot: FNTB_HUMAN, P49356
    Function: Catalyzes the transfer of a farnesyl moiety from farnesyl pyrophosphate to a cysteine at the fourth position
    from the C-terminus of several proteins. The beta subunit is responsible for peptide-binding
    Catalytic activity: Farnesyl diphosphate + protein-cysteine = S-farnesyl protein + diphosphate

         Genatlas biochemistry entry for FNTB:
    CAAX farnesyltransferase,beta subunit,promoting the prenylation of Ras,first step of a series of post translational
    modification of RAS,required for its association with the inner surface of the plasma membrane,also involved in
    maturation of other proteins including Ras family members,the gamma subunit of G proteins and nuclear lamins

    Enzyme Number (IUBMB): EC 2.5.1.581 2

    miRNA
    Products:
        
    miRTarBase miRNAs that target FNTB:
    hsa-mir-346 (MIRT004223)

    OriGene 3'-UTR Clone: FNTB
    Browse MicroRNA Expression Plasmids
    QIAGEN Custom miScript Target Protector blocks miRNA-binding site of human, mouse, rat FNTB
    8/20 QIAGEN miScript miRNA Assays for microRNAs that regulate FNTB (see all 20):
    hsa-miR-142-3p hsa-miR-429 hsa-miR-3651 hsa-miR-374c hsa-miR-1244 hsa-miR-330-3p hsa-miR-376c hsa-miR-1827
    SwitchGear 3'UTR luciferase reporter plasmidFNTB 3' UTR sequence
    Inhib. RNA
    Products:
        
    Browse for Gene Knock-down Tools from EMD Millipore
    OriGene 29mer shRNA kits in GFP-retroviral vector in human, mouse, rat for FNTB (see all 7)
    OriGene shRNA RFP: FNTB
    OriGene siRNA: FNTB
    QIAGEN FlexiTube/FlexiPlate siRNA for gene silencing in human, mouse, rat FNTB

    Gene Editing
    Products:
    DNA2.0 Custom Protein Engineering Service for FNTB

    Clone
    Products:
         
    Browse Clones for the Expression of Recombinant Proteins Available from EMD Millipore
    OriGene Myc/DDK tagged cDNA clones in CMV expression vector in human, mouse, rat for FNTB (see all 3)
    OriGene untagged cDNA clones in CMV expression vector in human, mouse, rat for FNTB (see all 2)
    OriGene custom cloning services – gene synthesis, subcloning, mutagenesis, variant library, vector shuttling 
    GenScript: all cDNA clones in your preferred vector: FNTB (NM_002028)
    Browse Sino Biological Human cDNA Clones
    DNA2.0 Custom Codon Optimized Gene Synthesis Service for FNTB
    Vector BioLabs ready-to-use adenovirus/AAV for human, mouse, rat FNTB 

    Cell Line
    Products:
         
    GenScript Custom overexpressing Cell Line Services for FNTB
    Search LifeMap BioReagents cell lines for FNTB

    In Situ Assay
    Products:
       

     
    Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for FNTB

    Gene Ontology (GO): 5/8 molecular function terms (GO ID links to tree view) (see all 8):    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0004311farnesyltranstransferase activity ----
    GO:0004660contributes to protein farnesyltransferase activity IDA19228685
    GO:0005515protein binding IPI15451670
    GO:0008144drug binding ----
    GO:0008270zinc ion binding ----


    FNTB for ontologies           About GeneDecksing


    Animal Models:
         Mouse knock-outs for FNTB: Fntbtm1.2Mbrg Fntbtm1.1Bbd
         10 MGI mutant phenotypes (inferred from 4 alleles(MGI details for Fntb):
     cellular  embryogenesis  growth/size  hematopoietic system  homeostasis/metabolism 
     immune system  integument  mortality/aging  respiratory system  tumorigenesis 

    FNTB for phenotypes           About GeneDecksing


    (Pathways according to EMD Millipore, R&D Systems, Cell Signaling Technology, KEGG, PharmGKB, BioSystems, Reactome, Tocris Bioscience, GeneGo (Thomson Reuters), QIAGEN, and/or UniProtKB, Sets of similar genes according to GeneDecks, Interaction Networks according to SABiosciences, and/or STRING, Interactions according to 1UniProtKB, 2MINT, 3I2D, and/or 4STRING, with links to IntAct and Ensembl, Ontologies according to Gene Ontology Consortium 01 Mar 2013 via Entrez Gene).
    About This Section

    Unified GeneCards pathways  About this table 
    See pathways by source

    Super-pathwaycontained gene-specific pathways
    1G-protein signaling K-RAS regulation pathway
    G-protein signaling K-RAS regulation pathway1.00
    G-protein signaling H-RAS regulation pathway0.27
    G-protein signaling_K-RAS regulation pathway0.96
    G-protein signaling_H-RAS regulation pathway0.27
    2G-protein signaling_RhoA regulation pathway
    G-protein signaling RhoB regulation pathway0.16
    G-protein signaling_RhoB regulation pathway0.16

    Pathway sources
    See GeneCards unified pathways
    Show all pathways

    3 EMD Millipore Pathways for FNTB
        G-protein signaling K-RAS regulation pathway
    G-protein signaling RhoB regulation pathway
    G-protein signaling H-RAS regulation pathway


    3 GeneGo (Thomson Reuters) Pathways for FNTB
        G-protein signaling H-RAS regulation pathway
    G-protein signaling RhoB regulation pathway
    G-protein signaling K-RAS regulation pathway



    FNTB for pathways           About GeneDecksing

    Interactions:

        Search SABiosciences Gene Network CentralTM Interacting Genes and Proteins Networks for FNTB

    STRING Interaction Network Preview (showing 5 interactants - click image to see 19)

    5/46 Interacting proteins for FNTB (P493561, 2, 3 ENSP000002461664) via UniProtKB, MINT, STRING, and/or I2D (see all 46)
    InteractantInteraction Details
    GeneCardExternal ID(s)
    HIST1H4AP628053I2D: score=1 
    HIST1H4BP628053I2D: score=1 
    HIST1H4CP628053I2D: score=1 
    HIST1H4DP628053I2D: score=1 
    HIST1H4EP628053I2D: score=1 
    About this table

    Gene Ontology (GO): 5/10 biological process terms (GO ID links to tree view) (see all 10):    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0008284positive regulation of cell proliferation ----
    GO:0008285negative regulation of cell proliferation ----
    GO:0010035response to inorganic substance ----
    GO:0014070response to organic cyclic compound ----
    GO:0018343protein farnesylation IDA19228685


    FNTB for ontologies           About GeneDecksing



    (Chemical Compounds according to UniProtKB, Enzo Life Sciences, EMD Millipore, Tocris Bioscience HMDB, BitterDB, and/or Novoseek, and Drugs according to DrugBank, Enzo Life Sciences, and/or PharmGKB, with drugs/clinical trials/news search links to CenterWatch)
    About This Section
    EMD Millipore small molecules for FNTB:
    Small Molecule - inhibitor
    Browse drugs & compounds from Enzo Life Sciences

    Browse Tocris compounds for FNTB

    1 HMDB Compound for FNTB    About this table
    CompoundSynonyms CAS #PubMed Ids
    Farnesyl pyrophosphate(2E,6E)-Farnesyl diphosphate (see all 15)13058-04-3--

    10 DrugBank Compounds for FNTB    About this table
    CompoundSynonyms CAS #TypeActionsPubMed Ids
    (11S)-8-CHLORO-11-[1-(METHYLSULFONYL)PIPERIDIN-4-YL]-6-PIPERAZIN-1-YL-11H-BENZO[5,6]CYCLOHEPTA[1,2-B]PYRIDINE-- --target--10592235
    (20S)-19,20,21,22-TETRAHYDRO-19-OXO-5H-18,20-ETHANO-12,14-ETHENO-6,10-METHENO-18H-BENZ[D]IMIDAZO[4,3-K][1,6,9,12]OXATRIAZA-CYCLOOCTADECOSINE-9-CARBONITRILE-- --target--10592235
    (20S)-19,20,22,23-TETRAHYDRO-19-OXO-5H,21H-18,20-ETHANO-12,14-ETHENO-6,10-METHENOBENZ[D]IMIDAZO[4,3-L][1,6,9,13]OXATRIAZACYCLONOADECOSINE-9-CARBONITRILE-- --target--10592235
    2-CHLORO-5-(3-CHLORO-PHENYL)-6-[(4-CYANO-PHENYL)-(3-METHYL-3H-IMIDAZOL-4-YL)- METHOXYMETHYL]-NICOTINONITRILE-- --target--10592235
    4-[(5-{[4-(3-CHLOROPHENYL)-3-OXOPIPERAZIN-1-YL]METHYL}-1H-IMIDAZOL-1-YL)METHYL]BENZONITRILE-- --target--10592235
    ALPHA-HYDROXYFARNESYLPHOSPHONIC ACID-- --target--10592235
    FARNESYL-- --target--10592235
    FARNESYL DIPHOSPHATE-- --target--10592235
    GERANYLGERANYL DIPHOSPHATE-- --target--10592235
    [(3,7,11-TRIMETHYL-DODECA-2,6,10-TRIENYLOXYCARBAMOYL)-METHYL]-PHOSPHONIC ACID-- --target--10592235

    Search CenterWatch for drugs/clinical trials and news about FNTB 

    (Secondary structures according to fRNAdb,
    GenBank/EMBL/DDBJ Accessions according to
    Unigene (Build 235 Homo sapiens; Mar 10 2013) or GenBank,
    RefSeq according to Entrez Gene,
    DOTS (version 10), and/or AceView, transcript ids from Ensembl with links to UCSC,
    exon structure from GeneLoc, alternative splicing isoforms according to ASD and/or ECgene,
    RNAi Products from EMD Millipore,
    siRNAs from OriGene, QIAGEN, shRNA from OriGene, microRNA from QIAGEN,
    Tagged/untagged cDNA clones from OriGene, SwitchGear Genomics, GenScript, DNA2.0, Vector BioLabs, Primers from OriGene, SABiosciences, and/or QIAGEN )
    About This Section

    REFSEQ mRNAs for FNTB gene: 
    NM_002028.3  

    Unigene Cluster for FNTB:

    Farnesyltransferase, CAAX box, beta
    Hs.325531  [show with all ESTs]
    Unigene Representative Sequence: NM_001202559
    8 Ensembl transcripts including schematic representations, and UCSC links where relevant:
    ENST00000246166(uc010tsl.2 uc010tsm.2 uc001xia.3) ENST00000555372
    ENST00000555742 ENST00000554210 ENST00000554334 ENST00000556709 ENST00000555618
    ENST00000557300

    miRNA
    Products:
         
    OriGene 3'-UTR Clone: FNTB
    Browse OriGene MicroRNA Expression Plasmids
    QIAGEN Custom miScript Target Protector blocks miRNA-binding site of human, mouse, rat FNTB
    8/20 QIAGEN miScript miRNA Assays for microRNAs that regulate FNTB (see all 20):
    hsa-miR-142-3p hsa-miR-429 hsa-miR-3651 hsa-miR-374c hsa-miR-1244 hsa-miR-330-3p hsa-miR-376c hsa-miR-1827
    SwitchGear 3'UTR luciferase reporter plasmidFNTB 3' UTR sequence
    Inhib. RNA
    Products:
         
    Browse for Gene Knock-down Tools from EMD Millipore
    OriGene 29mer shRNA kits in GFP-retroviral vector in human, mouse, rat for FNTB (see all 7)
    OriGene shRNA RFP: FNTB
    OriGene siRNA: FNTB
    QIAGEN FlexiTube/FlexiPlate siRNA for gene silencing in human, mouse, rat FNTB
    Clone
    Products:
         
    OriGene Myc/DDK tagged cDNA clones in CMV expression vector in human, mouse, rat for FNTB (see all 3)
    OriGene untagged cDNA clones in CMV expression vector in human, mouse, rat for FNTB (see all 2)
    OriGene custom cloning services – gene synthesis, subcloning, mutagenesis, variant library, vector shuttling 
    GenScript: all cDNA clones in your preferred vector: FNTB (NM_002028)
    DNA2.0 Custom Codon Optimized Gene Synthesis Service for FNTB
    Vector BioLabs ready-to-use adenovirus/AAV for human, mouse, rat FNTB 
    Primer
    Products:
        
    OriGene genome-wide validated SYBR primer pairs in human, mouse, rat for FNTB
    Browse OriGene validated miRNA SYBR primer pairs
    SABiosciences RT2 qPCR Primer Assay in human, mouse, rat FNTB
      QIAGEN QuantiTect SYBR Green Assays in human, mouse, rat FNTB
      QIAGEN QuantiFast Probe-based Assays in human, mouse, rat FNTB

    Additional cDNA sequence: 

    AK093298.1 AK225917.1 AK295972.1 AK315714.1 BC013574.1 BC020232.1 BC035148.1 BC052775.1 
    BX248269.1 L00635.1 L10414.1 

    16 DOTS entries:

    DT.444290  DT.91732520  DT.100835090  DT.75149664  DT.100840472  DT.120751748  DT.100789404  DT.100738434 
    DT.100789405  DT.92427119  DT.100692416  DT.100705079  DT.120751814  DT.91680670  DT.97805221  DT.92024014 

    24/225 AceView cDNA sequences (see all 225):

    CR618315 BU153989 AA873486 BM674471 BX394424 BU740458 BM809674 BE407340 
    BG676869 CA420933 BC020232 BM852620 AI347875 BX952567 AW262685 BM672130 
    BQ218949 BC013574 BE221171 BQ226383 W49805 BX383952 W74655 AI244817 

    GeneLoc Exon Structure


    (RNA expression data according to H-InvDB, NONCODE, miRBase, and RNAdb, Expression images according to data from BioGPS, Illumina Human BodyMap, and CGAP SAGE, Sets of similar genes according to GeneDecks, in vivo and in vitro expression data from LifeMap Discovery™, plus additional links to Genevestigator, and/or SOURCE, and/or BioGPS, and/or UniProtKB,
    PCR Arrays from SABiosciences, Primers from OriGene, SABiosciences, and/or QIAGEN, In Situ Hybridization Assays from Advanced Cell Diagnostics)
    About This Section

    FNTB expression in normal human tissues (normalized intensities)
    See probesets specificity/sensitivity at GeneAnnot
    About this imageBioGPS
    CGAP TAG: AGGCGCTTAG

    Microarray
    RNAseq (Illumina Body Map)
    (100×FPKM)½
    SAGE (Serial Analysis of Gene Expression)

    About this image
    See FNTB Protein Expression from SPIRE MOPED and PaxDB
    Genevestigator expression for FNTB

    SOURCE GeneReport for Unigene cluster: Hs.325531
        SABiosciences Custom PCR Arrays for FNTB
    Primer
    Products:
    OriGene genome-wide validated SYBR primer pairs in human, mouse, rat for FNTB
    Browse OriGene validated miRNA SYBR primer pairs
    SABiosciences RT2 qPCR Primer Assay in human, mouse, rat FNTB
    QIAGEN QuantiTect SYBR Green Assays in human, mouse, rat FNTB
    QIAGEN QuantiFast Probe-based Assays in human, mouse, rat FNTB
    In Situ
    Assay Products:
     

     
    Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for FNTB

    (Orthologs according to 1,2HomoloGene (2older version, for species not in 1newer version), 3euGenes, 4SGD , 5MGI Mar 06 2013, with possible further links to Flybase and/or WormBase, and/or 6Ensembl pan taxonomic compara , Gene Trees according to Ensembl and TreeFam)
    About This Section

    This gene was present in the common ancestor of eukaryotes.

    Orthologs for FNTB gene from 8/35 species (see all 35)    About this table
    Organism Taxonomic
    classification
    Gene Description Human
    Similarity
    Orthology
    Type
    Details
    chicken
    (Gallus gallus)
    Aves LOC1008576831 protein farnesyltransferase subunit beta-like 76.42(n)
    83.73(a)
      100857683  XM_003643780.1  XP_003643828.1 
    lizard
    (Anolis carolinensis)
    Reptilia FNTB6
    --
    82(a)
    1 → many
    1(93647375-93662482)
    zebrafish
    (Danio rerio)
    Actinopterygii 570450492   -- 76.32(n)    57045049 
    fruit fly
    (Drosophila melanogaster)
    Insecta CG175651 , 3 RAB-protein geranylgeranyltransferase3
    CG175651
    52(a)3
    57.31(n)1
    53.74(a)1
      419891  NM_142283.31  NP_650540.11 
    worm
    (Caenorhabditis elegans)
    Secernentea F23B12.63
    fntb-11
    protein farnesyltransferase beta subunit3
    Protein FNTB-11
    46(a)3
    51.01(n)1
    48.07(a)1
      V(14450340-14452041)3
    1799461  NM_074179.41  NP_506580.11 
    baker's yeast
    (Saccharomyces cerevisiae)
    Saccharomycetes RAM1(YDL090C)4
    RAM11
    Beta subunit of the CAAX farnesyltransferase (FTase) more4
    Ram1p1
    46.5(n)1
    42.54(a)1
      4(296329-295034)4
    8514681, 4  NP_010193.11, 4 
    thale cress
    (Arabidopsis thaliana)
    eudicotyledons ERA11 protein farnesyltransferase subunit beta 54.25(n)
    49.22(a)
      834026  NM_123392.1  NP_198844.1 
    rice
    (Oryza sativa)
    Liliopsida Os.209912 Oryza sativa (japonica cultivar-group) putative farnesyltranstransferase more 74.79(n)    NM_191123.1 


    ENSEMBL Gene Tree for FNTB (if available)
    TreeFam Gene Tree for FNTB (if available) 

    (Paralogs according to 1HomoloGene,
    2Ensembl, and 3SIMAP, Pseudogenes according to 4Pseudogene.org Build 68)
    About This Section
    Paralogs for FNTB gene
    CHURC1-FNTB2  
    1 SIMAP similar gene for FNTB using alignment to 2 protein entries:     FNTB_HUMAN (see all proteins):
    CHURC1-FNTB

    FNTB for paralogs           About GeneDecksing



    (SNPs/Variants according to the 1NCBI SNP Database, 2Ensembl, 3PupaSUITE, UniProtKB, and DNA2.0, Linkage Disequilibrium by HapMap, Structural Variations(CNVs/InDels/Inversions) from the Database of Genomic Variants, Mutations from the Human Gene Mutation Database (HGMD) and the Locus Specific Mutation Databases (LSDB), Blood group antigen gene mutations by BGMUT, Resequencing Primers from QIAGEN, Cancer Mutation PCR Arrays and Assays and Copy Number PCR Arrays from SABiosciences)
    About This Section

    10/1246 NCBI SNPs in FNTB are shown (see all 1246    About this table
    Genomic DataTranscription Related DataAllele Frequencies
    SNP IDValidClinical
    significance
    Chr 14 posSequence#AA
    Chg
    TypeMore#Allele
    freq
    PopTotal
    sample
    More
    ----------
    rs1911227621,2
    --65451779(+) TAGGTC/GTTAGT 3 -- int1 us2k10--------
    rs1501319441,2
    --65451901(+) AGAGAA/CTGAGA 3 -- int1 us2k10--------
    rs1416159931,2
    --65451991(+) GAACAC/GAGTGA 3 -- int1 us2k10--------
    rs1462281761,2
    --65452038(+) GTACCC/TGGAAT 3 -- int1 us2k10--------
    rs349524041,2
    C,--65452048(+) GTCTG-/TTATTATC 3 -- int1 us2k10--------
    rs1379396201,2
    --65452078(+) ACATAA/CAACTC 3 -- us2k1 int10--------
    rs1814139741,2
    --65452285(+) AGCTGA/GGCGTG 3 -- int1 us2k10--------
    rs777516451,2
    F,--65452317(+) AGATAC/TTCAGG 3 -- us2k1 int13Minor allele frequency- T:0.13WA NA EA 358
    rs1422980571,2
    --65452421(+) ACCCAA/GGCTGG 3 -- int1 us2k10--------
    rs124328361,2
    C,A,H--65452495(+) ccttaG/Ccctgt 3 -- us2k1 int14Minor allele frequency- C:0.00NS EA 416

    HapMap Linkage Disequilibrium report for FNTB (65453438 - 65529370 bp)
    Structural Variations (Copy Number Variations, Insertions/Deletions, Inversions)
    Database of Genomic Variants (DGV): 1 variation for FNTB
         1 CNV: 101971

    SABiosciences Cancer Mutation PCR Assays
    QIAGEN SeqTarget long-range PCR primers in human, mouse, rat for resequencing FNTB
    DNA2.0 Custom Variant and Variant Library Synthesis for FNTB

    (in which this Gene is Involved, According to MalaCards, OMIM, UniProtKB, the University of Copenhagen DISEASES database, Genatlas, GeneTests, GAD, HuGE Navigator, and/or TGDB.)
    About This Section

    FNTB for disorders           About GeneDecksing

    OMIM gene information: 134636    OMIM disorders: --

    1 disease for FNTB:    About MalaCards
    colorectal cancer

    Human Genome Epidemiology (HuGE) Navigator: FNTB (1 document)

    Export disorders for FNTB gene to outside databases

    (in PubMed. Associations of this gene to articles via 1Entrez Gene, 2UniProtKB/Swiss-Prot, 3HGNC, 4GAD, 5PharmGKB, 6HMDB, 7DrugBank, 8UniProtKB/TrEMBL, 9 Novoseek, and/or 10fRNAdb)
    About This Section

    PubMed articles for FNTB gene, integrated from 9 sources (see all 38):
    (articles sorted by number of sources associating them with FNTB)
        Utopia: connect your pdf to the dynamic
    world of online information

    1. cDNA cloning of the two subunits of human CAAX farnesyltransferase and chromosomal mapping of FNTA and FNTB loci and related sequences. (PubMed id 8276393)1, 2, 3 Andres D.A.... Francke U. (1993)
    2. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PubMed id 14702039)1, 2 Ota T.... Sugano S. (2004)
    3. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PubMed id 15489334)1, 2 Gerhard D.S....Malek J. (2004)
    4. Dual protein farnesyltransferase-geranylgeranyltransferase-I inhibitors as potential cancer chemotherapeutic agents. (PubMed id 12825937)1, 2 deSolms S.J.... Taylor J.S. (2003)
    5. 3-aminopyrrolidinone farnesyltransferase inhibitors: design of macrocyclic compounds with improved pharmacokinetics and excellent cell potency. (PubMed id 12036349)1, 2 Bell I.M.... Zartman C.B. (2002)
    6. The crystal structure of human protein farnesyltransferase reveals the basis for inhibition by CaaX tetrapeptides and their mimetics. (PubMed id 11687658)1, 2 Long S.B.... Beese L.S. (2001)
    7. Characterization of recombinant human farnesyl-protein transferase: cloning, expression, farnesyl diphosphate binding, and functional homology with yeast prenyl-protein transferases. (PubMed id 8494894)1, 2 Omer C.A.... Kohl N.E. (1993)
    8. Expression of farnesyltransferase in primary liver can cer. (PubMed id 22882915)1 Sui G.D....Hu S.Y. (2012)
    9. A high-throughput approach for measuring temporal chan ges in the interactome. (PubMed id 22863883)1 Kristensen A.R....Foster L.J. (2012)
    10. Expansion of protein farnesyltransferase specificity u sing 'tunable' active site interactions: development of bioengineered prenylation pathways. (PubMed id 22992747)1 Hougland J.L....Fierke C.A. (2012)

    (in PubMed, OMIM, and NCBI Bookshelf)
    About This Section
     ANDOR
    Aliases
    Free Text  

      Query String
    PubMed
    OMIM
    NCBI Bookshelf
      (Note: In FireFox, select the above section and copy using Ctrl-C)

    (According to Entrez Gene, HGNC, AceView, euGenes, Ensembl, miRBase, ECgene, Kegg, and/or H-InvDB)
    About This Section
    Entrez Gene: 2342 HGNC: 3785 AceView: FNTB Ensembl:ENSG00000257365 euGenes: HUgn2342
    ECgene: FNTB H-InvDB: FNTB

    (According to HUGE)
    About This Section
      --

    (According to PharmGKB, ATLAS, HORDE, IMGT, LEIDEN, UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL,
    Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot)
    About This Section
    NameDescription
    PharmGKB entry for FNTB Pharmacogenomics, SNPs, Pathways

    (Patent information from GeneIP,
    Licensable technologies from WIS Yeda, Salk, Tufts,
    IP news from LifeMap Sciences, Inc.)
    About This Section
    Patent Information for FNTB gene:
    Search GeneIP for patents involving FNTB

    GeneCards and IP:
    Japan Patent Office Licenses GeneCards     European Patent Office Licenses GeneCards     Improving the IP Search



    (Antibodies, recombinant proteins, and assays from EMD Millipore, R&D Systems, OriGene, QIAGEN, GenScript, Cell Signaling Technology, SABiosciences, Novus Biologicals, Sino Biological, Enzo Life Sciences, Abcam, ProSpec, Uscn, Thermo Fisher Scientific, Gene Editing from DNA2.0, Clones from EMD Millipore, OriGene, GenScript, Sino Biological, DNA2.0, SwitchGear Genomics, Vector BioLabs, Cell lines from GenScript and LifeMap BioReagents, PCR Arrays from SABiosciences, Drugs and/or compounds from EMD Millipore, Tocris Bioscience, and/or Enzo Life Sciences),
    In Situ Hybridization Assays from
    Advanced Cell Diagnostics
    About This Section

     EMD Millipore small molecules (inhibitor) for FNTB
     EMD Millipore Mono- and Polyclonal Antibodies for the study of FNTB
     Browse Clones for the Expression of Recombinant Proteins Available from EMD Millipore
     Browse for Gene Knock-down Tools from EMD Millipore
     Browse Purified and Recombinant Proteins at EMD Millipore
     Browse Kits and Assays available from EMD Millipore
     
     EMD Millipore Custom Antibody & Bulk Services
     EMD Millipore Preclinical / Clinical Development Services
     EMD Millipore Immunoassay Services
     EMD Millipore Target Screening & Profiling Services

      
     Browse Antibodies   Browse Cell Culture Products  
     Browse ELISAs   Browse Flow Cytometry Kits  
     Browse Primer Pairs   Browse Kinase Activity Assays/Reagents  
     Browse ELISpot Kits/Development Modules   Browse TFB/Immunoprecipitation Assays  
     Browse Apoptosis Detection Kits/Reagents   Browse Ubiquitin Proteasome Pathway (UPP) Assay Kits/Reagents  
     Browse DNA Damage/Repair Kits/Reagents   Browse Multiplex/Array Assay Kits/Reagents  
     Browse Cell Selection/Detection Kits/Reagents   Browse Secondary Antibodies/Controls/Staining Reagents  
     Browse Phosphatase Activity Assays/Reagents   Browse Recombinant/Natural Proteins  
     OriGene Antibodies for FNTB   OriGene shRNA RFP for FNTB  
     OriGene 29mer shRNA kits in GFP-retroviral vector in human, mouse, rat for FNTB   OriGene genome-wide validated SYBR primer pairs in human, mouse, rat for FNTB  
     OriGene Protein Over-expression Lysate for FNTB   Browse OriGene Fluorogenic Cell Assay Kits  
     OriGene siRNA for FNTB   OriGene 3'-UTR Clone for FNTB  
     OriGene untagged cDNA clones in CMV expression vector in human, mouse, rat for FNTB   OriGene Myc/DDK tagged cDNA clones in CMV expression vector in human, mouse, rat for FNTB  
     Browse OriGene GFP tagged cDNA clones in CMV expression vector   Browse OriGene MicroRNA Expression Plasmids  
     Browse OriGene basic RS shRNAs   Browse OriGene validated miRNA SYBR primer pairs  
     OriGene Purified Protein for FNTB   OriGene custom cloning services - gene synthesis, subcloning, mutagenesis, variant library, vector shuttling  
     OriGene Custom Antibody Services for FNTB   OriGene Custom Protein Services for FNTB  
     OriGene Custom Immunoassay Development  

     
     
     QIAGEN Custom miScript Target Protector blocks miRNA-binding site of in human, mouse, rat FNTB
     QIAGEN SeqTarget long-range PCR primers in human, mouse, rat for resequencing FNTB
     QIAGEN PyroMark CpG Assay predesigned Pyrosequencing DNA Methylation assays in human, mouse, rat FNTB
     QIAGEN FlexiTube/FlexiPlate siRNA for gene silencing in human, mouse, rat FNTB
     QIAGEN QuantiFast Probe-based Assays in human, mouse, rat FNTB
     QIAGEN QuantiTect SYBR Green Assays in human, mouse, rat FNTB
     GenScript Custom Purified and Recombinant Proteins Services for FNTB GenScript cDNA clones with any tag delivered in your preferred vector for FNTB
     GenScript Custom Assay Services for FNTB GenScript Custom Superior Antibodies Services for FNTB
     GenScript Custom overexpressing Cell Line Services for FNTB CloneReady with Over 120,000 Genes
     Gene Synthesis: Any Gene in Any Vector Vector-based siRNA and miRNA, Ready for Transfection
     Gene Mutant Library, Variants up to 10^11 Plasmid Preparation
     Custom Peptide Services
     Search for Antibodies & Assays

     Regulatory tfbs in FNTB promoter
     Search Chromatin IP Primers for FNTB
     RT2 qPCR Primer Assay in human, mouse, rat FNTB
     Search GNC Networks for FNTB
     SABiosciences Custom PCR Arrays for FNTB
     Search Tocris compounds for FNTB
     Browse Sino Biological Proteins and Antibodies
     Browse Sino Biological cDNA Clones
     Antibodies/Proteins Production Services
     Rabbit Monoclonal Antibody Platform
     Bulk Purchasing
     Search www.enzolifesciences.com for proteins, assays, substrates, inhibitors & antibodies
     Novus Tissue Slides
     FNTB antibodies
     FNTB proteins
     FNTB lysates
     Antibodies for FNTB
     See all of Abcam's Antibodies, Kits and Proteins for FNTB
     Custom Antibody / Protein Production Service
     Bulk Purchasing
     Advantages of Rabbit Monoclonal antibodies
     Abcam protocols and scientific support
     Browse ProSpec Recombinant Proteins




     Browse ELISAs, CLIAs, Proteins, and Antibodies at Uscn
     Search LifeMap BioReagents cell lines for FNTB
     Gene Synthesis
     Protein Engineering
     Variant Library Synthesis
     Codon Optimization
     Protein Production and Purification
     Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for FNTB
     SwitchGear 3'UTR luciferase reporter plasmids for FNTB
     SwitchGear Promoter luciferase reporter plasmids for FNTB
     ThermoFisher Antibodies for FNTB
     Vector BioLabs ready-to-use adenovirus/AAV for human, mouse, rat FNTB
           
    GeneCards Homepage - Last full update: 18 Mar 2013 - Incrementals: 21 Mar 2013 , 15 Apr 2013 , 26 Apr 2013

    View Random Gene

    Category
    VWF
    (GIFTS: 73)
    von Willebrand factor
    GIFtS Group
    The GeneCards human gene database gene index: 1 3 5 6 A B C D E F G H I J K L M N O P Q R S T U V W X Y Z 


    Developed at the Crown Human Genome Center, Department of Molecular Genetics, the Weizmann Institute of Science

    Hot genes      Disease genes      FNTB gene at Home site.
    hostname: 356980-web2.xennexinc.com index build: 100 solr: 1.4