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Aliases for FNTAP1 Gene

Aliases for FNTAP1 Gene

  • Farnesyltransferase, CAAX Box, Alpha Pseudogene 1 2 3
  • Farnesyltransferase, CAAX Box, Alpha-Like 1 2 3
  • AP003097.1 5
  • FNTAL1 3

External Ids for FNTAP1 Gene

Previous HGNC Symbols for FNTAP1 Gene

  • FNTAL1

Previous GeneCards Identifiers for FNTAP1 Gene

  • GC11P085907

Summaries for FNTAP1 Gene

GeneCards Summary for FNTAP1 Gene

FNTAP1 (Farnesyltransferase, CAAX Box, Alpha Pseudogene 1) is a Pseudogene.

Additional gene information for FNTAP1 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for FNTAP1 Gene

Genomics for FNTAP1 Gene

GeneHancer (GH) Regulatory Elements for FNTAP1 Gene

Promoters and enhancers for FNTAP1 Gene
GeneHancer (GH) Identifier GH Type GH
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH11I086192 Promoter/Enhancer 1.7 Ensembl ENCODE dbSUPER 550.8 -1.8 -1811 1.9 ARNT ARID4B SIN3A YY1 ZNF766 E2F8 ZNF207 ZNF143 DEK JUNB ENSG00000254699 FNTAP1 CREBZF EED RNU6-560P PICALM CCDC81
GH11I086195 Enhancer 1.1 ENCODE dbSUPER 550.8 +1.5 1522 2.1 SMAD1 ATF1 ZNF133 FEZF1 FOS ATF7 CAVIN1 ZNF592 NFIL3 ATF4 FNTAP1 RNU6-560P PICALM HIKESHI CREBZF ENSG00000276669
GH11I086201 Enhancer 1.7 FANTOM5 Ensembl ENCODE dbSUPER 0.4 +7.5 7469 2.8 HDGF PKNOX1 ATF1 ARNT IRF4 YY1 POLR2B ZNF766 E2F8 KLF7 PICALM RNU6-560P EED HIKESHI CCDC81 FNTAP1 ENSG00000276669
GH11I086206 Enhancer 1.4 FANTOM5 Ensembl ENCODE dbSUPER 0.4 +10.8 10758 1 SOX13 CTCF TFAP4 FOXA2 MAX CEBPG RAD21 ZNF48 ETS1 TEAD3 EED RNU6-560P HIKESHI PICALM FNTAP1 ENSG00000276669
GH11I086214 Enhancer 0.8 ENCODE 0.4 +19.8 19803 0.2 HDGF BMI1 BATF IRF4 ZNF207 ZNF143 ATF7 ETV6 BCLAF1 IKZF2 ENSG00000276669 PICALM RNU6-560P EED FNTAP1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around FNTAP1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for FNTAP1 Gene

Genomic Locations for FNTAP1 Gene
1,648 bases
Plus strand

Genomic View for FNTAP1 Gene

Genes around FNTAP1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
FNTAP1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for FNTAP1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for FNTAP1 Gene

Proteins for FNTAP1 Gene

Post-translational modifications for FNTAP1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for FNTAP1 Gene

Domains & Families for FNTAP1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for FNTAP1 Gene

Function for FNTAP1 Gene

Phenotypes From GWAS Catalog for FNTAP1 Gene

Phenotypes for FNTAP1 Gene

GenomeRNAi human phenotypes for FNTAP1:
genes like me logo Genes that share phenotypes with FNTAP1: view

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for FNTAP1 Gene

Localization for FNTAP1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for FNTAP1 Gene

Pathways & Interactions for FNTAP1 Gene

SuperPathways for FNTAP1 Gene

No Data Available

Interacting Proteins for FNTAP1 Gene

Gene Ontology (GO) - Biological Process for FNTAP1 Gene


No data available for Pathways by source and SIGNOR curated interactions for FNTAP1 Gene

Drugs & Compounds for FNTAP1 Gene

No Compound Related Data Available

Transcripts for FNTAP1 Gene

mRNA/cDNA for FNTAP1 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for FNTAP1 Gene

No ASD Table

Relevant External Links for FNTAP1 Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for FNTAP1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for FNTAP1 Gene

mRNA differential expression in normal tissues according to GTEx for FNTAP1 Gene

This gene is overexpressed in Brain - Spinal cord (cervical c-1) (x4.1).

NURSA nuclear receptor signaling pathways regulating expression of FNTAP1 Gene:

genes like me logo Genes that share expression patterns with FNTAP1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for FNTAP1 Gene

Orthologs for FNTAP1 Gene

Evolution for FNTAP1 Gene

Gene Tree for FNTAP1 (if available)
Gene Tree for FNTAP1 (if available)

No data available for Orthologs for FNTAP1 Gene

Paralogs for FNTAP1 Gene

No data available for Paralogs for FNTAP1 Gene

Variants for FNTAP1 Gene

Additional Variant Information for FNTAP1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for FNTAP1 Gene

Disorders for FNTAP1 Gene

No disorders were found for FNTAP1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for FNTAP1 Gene

Publications for FNTAP1 Gene

  1. cDNA cloning of the two subunits of human CAAX farnesyltransferase and chromosomal mapping of FNTA and FNTB loci and related sequences. (PMID: 8276393) Andres DA … Francke U (Genomics 1993) 2 3 58
  2. Protein prenyltransferases: anchor size, pseudogenes and parasites. (PMID: 12956414) Maurer-Stroh S … Eisenhaber F (Biological chemistry 2003) 3 58

Products for FNTAP1 Gene

Sources for FNTAP1 Gene

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