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Aliases for FNTAP1 Gene

Aliases for FNTAP1 Gene

  • Farnesyltransferase, CAAX Box, Alpha Pseudogene 1 2 3
  • Farnesyltransferase, CAAX Box, Alpha-Like 1 2 3
  • FNTAL1 3 5

External Ids for FNTAP1 Gene

Previous HGNC Symbols for FNTAP1 Gene

  • FNTAL1

Previous GeneCards Identifiers for FNTAP1 Gene

  • GC11P085907

Summaries for FNTAP1 Gene

GeneCards Summary for FNTAP1 Gene

FNTAP1 (Farnesyltransferase, CAAX Box, Alpha Pseudogene 1) is a Pseudogene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for FNTAP1 Gene

Genomics for FNTAP1 Gene

Regulatory Elements for FNTAP1 Gene

Enhancers for FNTAP1 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH11F086195 1.2 Ensembl ENCODE 0.8 +1.6 1582 2.2 TBP HDAC1 ATF1 TBL1XR1 ZNF133 FEZF1 CHAMP1 GATA2 FOS USF2 RNU6-560P PICALM HIKESHI CREBZF FNTAP1 ENSG00000276669
GH11F086201 1.6 FANTOM5 Ensembl ENCODE 0.4 +8.0 7970 3.8 HDGF ATF1 PKNOX1 ARNT YY1 ELK1 KLF7 JUNB REST TBX21 PICALM RNU6-560P MIR6755 EED HIKESHI CCDC81 FNTAP1 ENSG00000276669
GH11F086205 1.4 FANTOM5 Ensembl ENCODE 0.4 +10.7 10670 1.2 SOX13 CTCF TFAP4 ZMYM3 MAX CEBPG ZNF48 RAD21 TEAD3 ZNF366 EED MIR6755 RNU6-560P HIKESHI PICALM ENSG00000276669 FNTAP1
GH11F086214 1.1 Ensembl ENCODE 0.3 +19.9 19870 0.4 HDGF TBL1XR1 BMI1 RAD21 EGR1 ZNF143 ZNF207 ETV6 CREM CBFB PICALM RNU6-560P MIR6755 EED CCDC81 ENSG00000276669 FNTAP1
GH11F086199 0.2 Ensembl 0.8 +4.8 4770 0.2 RNU6-560P PICALM FNTAP1 ENSG00000276669
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around FNTAP1 on UCSC Golden Path with GeneCards custom track

Promoters for FNTAP1 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters

Genomic Location for FNTAP1 Gene

86,195,131 bp from pter
86,196,778 bp from pter
1,648 bases
Plus strand

Genomic View for FNTAP1 Gene

Genes around FNTAP1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
FNTAP1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for FNTAP1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for FNTAP1 Gene

Proteins for FNTAP1 Gene

Post-translational modifications for FNTAP1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for FNTAP1 Gene

Domains & Families for FNTAP1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for FNTAP1 Gene

Function for FNTAP1 Gene

Phenotypes for FNTAP1 Gene

GenomeRNAi human phenotypes for FNTAP1:
genes like me logo Genes that share phenotypes with FNTAP1: view

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for FNTAP1 Gene

Localization for FNTAP1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for FNTAP1 Gene

Pathways & Interactions for FNTAP1 Gene

SuperPathways for FNTAP1 Gene

No Data Available

Interacting Proteins for FNTAP1 Gene

Gene Ontology (GO) - Biological Process for FNTAP1 Gene


No data available for Pathways by source and SIGNOR curated interactions for FNTAP1 Gene

Transcripts for FNTAP1 Gene

mRNA/cDNA for FNTAP1 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for FNTAP1 Gene

No ASD Table

Relevant External Links for FNTAP1 Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for FNTAP1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for FNTAP1 Gene

mRNA differential expression in normal tissues according to GTEx for FNTAP1 Gene

This gene is overexpressed in Brain - Spinal cord (cervical c-1) (x4.1).

NURSA nuclear receptor signaling pathways regulating expression of FNTAP1 Gene:

genes like me logo Genes that share expression patterns with FNTAP1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for FNTAP1 Gene

Orthologs for FNTAP1 Gene

Evolution for FNTAP1 Gene

Gene Tree for FNTAP1 (if available)
Gene Tree for FNTAP1 (if available)

No data available for Orthologs for FNTAP1 Gene

Paralogs for FNTAP1 Gene

No data available for Paralogs for FNTAP1 Gene

Variants for FNTAP1 Gene

Relevant External Links for FNTAP1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for FNTAP1 Gene

Disorders for FNTAP1 Gene

No disorders were found for FNTAP1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for FNTAP1 Gene

Publications for FNTAP1 Gene

  1. cDNA cloning of the two subunits of human CAAX farnesyltransferase and chromosomal mapping of FNTA and FNTB loci and related sequences. (PMID: 8276393) Andres D.A. … Francke U. (Genomics 1993) 2 3 64
  2. Protein prenyltransferases: anchor size, pseudogenes and parasites. (PMID: 12956414) Maurer-Stroh S. … Eisenhaber F. (Biol. Chem. 2003) 3 64

Products for FNTAP1 Gene

Sources for FNTAP1 Gene

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