Free for academic non-profit institutions. Other users need a Commercial license

Aliases for FNDC8 Gene

Aliases for FNDC8 Gene

  • Fibronectin Type III Domain Containing 8 2 3

External Ids for FNDC8 Gene

Summaries for FNDC8 Gene

GeneCards Summary for FNDC8 Gene

FNDC8 (Fibronectin Type III Domain Containing 8) is a Protein Coding gene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for FNDC8 Gene

Genomics for FNDC8 Gene

Genomic Location for FNDC8 Gene

Start:
35,121,579 bp from pter
End:
35,130,732 bp from pter
Size:
9,154 bases
Orientation:
Plus strand

Genomic View for FNDC8 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for FNDC8 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for FNDC8 Gene

Regulatory Elements for FNDC8 Gene

Proteins for FNDC8 Gene

  • Protein details for FNDC8 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q8TC99-FNDC8_HUMAN
    Recommended name:
    Fibronectin type III domain-containing protein 8
    Protein Accession:
    Q8TC99
    Secondary Accessions:
    • B2R9G6
    • Q9UFC2

    Protein attributes for FNDC8 Gene

    Size:
    324 amino acids
    Molecular mass:
    35921 Da
    Quaternary structure:
    No Data Available

neXtProt entry for FNDC8 Gene

Proteomics data for FNDC8 Gene at MOPED

Post-translational modifications for FNDC8 Gene

  • Modification sites at PhosphoSitePlus
  • Modification sites at neXtProt

Other Protein References for FNDC8 Gene

ENSEMBL proteins:
REFSEQ proteins:

No data available for DME Specific Peptides for FNDC8 Gene

Domains for FNDC8 Gene

Gene Families for FNDC8 Gene

HGNC:
  • FN3 :Fibronectin type III domain containing

Protein Domains for FNDC8 Gene

InterPro:
ProtoNet:

UniProtKB/Swiss-Prot:

FNDC8_HUMAN
Domain:
  • Contains 1 fibronectin type-III domain.:
    • Q8TC99
genes like me logo Genes that share domains with FNDC8: view

Function for FNDC8 Gene

Gene Ontology (GO) - Molecular Function for FNDC8 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005515 protein binding --
genes like me logo Genes that share ontologies with FNDC8: view

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for FNDC8 Gene

Localization for FNDC8 Gene

Subcellular locations from

COMPARTMENTS
Jensen Localization Image for FNDC8 Gene COMPARTMENTS Subcellular localization image for FNDC8 gene
Compartment Confidence
cytosol 3
nucleus 2

Gene Ontology (GO) - Cellular Components for FNDC8 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005634 nucleus IDA 21630459
genes like me logo Genes that share ontologies with FNDC8: view

Pathways for FNDC8 Gene

SuperPathways for FNDC8 Gene

No Data Available

Interacting Proteins for FNDC8 Gene

Gene Ontology (GO) - Biological Process for FNDC8 Gene

None

No data available for Pathways by source for FNDC8 Gene

Transcripts for FNDC8 Gene

mRNA/cDNA for FNDC8 Gene

(1) REFSEQ mRNAs :
(4) Additional mRNA sequences :
(22) Selected AceView cDNA sequences:
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for FNDC8 Gene

Fibronectin type III domain containing 8:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for FNDC8 Gene

No ASD Table

Relevant External Links for FNDC8 Gene

GeneLoc Exon Structure for
FNDC8
ECgene alternative splicing isoforms for
FNDC8

Expression for FNDC8 Gene

mRNA expression in normal human tissues for FNDC8 Gene

mRNA differential expression in normal tissues according to GTEx for FNDC8 Gene

This gene is overexpressed in Testis (49.6).

Integrated Proteomics: protein expression from ProteomicsDB and MOPED for FNDC8 Gene

SOURCE GeneReport for Unigene cluster for FNDC8 Gene Hs.120369

genes like me logo Genes that share expressions with FNDC8: view

Orthologs for FNDC8 Gene

This gene was present in the common ancestor of mammals.

Orthologs for FNDC8 Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia FNDC8 36
  • 99.69 (n)
  • 99.69 (a)
FNDC8 37
  • 100 (a)
OneToOne
cow
(Bos Taurus)
Mammalia FNDC8 36
  • 83.28 (n)
  • 76.18 (a)
FNDC8 37
  • 76 (a)
OneToOne
dog
(Canis familiaris)
Mammalia FNDC8 36
  • 85.57 (n)
  • 79.75 (a)
FNDC8 37
  • 80 (a)
OneToOne
mouse
(Mus musculus)
Mammalia Fndc8 36
  • 77.92 (n)
  • 67.83 (a)
Fndc8 16
Fndc8 37
  • 67 (a)
OneToOne
oppossum
(Monodelphis domestica)
Mammalia FNDC8 37
  • 36 (a)
OneToOne
rat
(Rattus norvegicus)
Mammalia Fndc8 36
  • 77.81 (n)
  • 67.83 (a)
Species with no ortholog for FNDC8:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for FNDC8 Gene

ENSEMBL:
Gene Tree for FNDC8 (if available)
TreeFam:
Gene Tree for FNDC8 (if available)

Paralogs for FNDC8 Gene

No data available for Paralogs for FNDC8 Gene

Variants for FNDC8 Gene

Sequence variations from dbSNP and Humsavar for FNDC8 Gene

SNP ID Clin Chr 17 pos Sequence Context AA Info Type MAF
rs998286 -- 35,128,001(+) CACCG(C/T)CCTAC intron-variant
rs1138723 -- 35,128,989(-) gattc(C/T)catag intron-variant
rs2128242 -- 35,123,676(+) gaggt(C/T)gcagt intron-variant
rs2306508 -- 35,127,396(+) CACAC(A/C/T)GTCAA synonymous-codon, reference
rs3736144 -- 35,129,340(+) GGGAC(A/G)TCCTG intron-variant

Structural Variations from Database of Genomic Variants (DGV) for FNDC8 Gene

Variant ID Type Subtype PubMed ID
nsv2036 CNV Insertion 18451855

Relevant External Links for FNDC8 Gene

HapMap Linkage Disequilibrium report
FNDC8

Disorders for FNDC8 Gene

Relevant External Links for FNDC8

Genetic Association Database (GAD)
FNDC8
Human Genome Epidemiology (HuGE) Navigator
FNDC8
genes like me logo Genes that share disorders with FNDC8: view

No data available for UniProtKB/Swiss-Prot for FNDC8 Gene

Publications for FNDC8 Gene

  1. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 2 3
  2. Proteomic characterization of the human sperm nucleus. (PMID: 21630459) de Mateo S. … Oliva R. (Proteomics 2011) 3
  3. Single-nucleotide polymorphisms, acute rejection, and severity of tubulitis in kidney transplantation, accounting for center-to-center variation. (PMID: 21085059) Israni A. … Oetting W.S. (Transplantation 2010) 49
  4. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 4
  5. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PMID: 15489334) Gerhard D.S. … Malek J. (Genome Res. 2004) 4

Products for FNDC8 Gene

Sources for FNDC8 Gene

Back to Top

Content