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Aliases for FMR1-IT1 Gene

Subcategory (RNA class) for FMR1-IT1 Gene

non-coding RNA

Quality Score for this RNA gene is


Aliases for FMR1-IT1 Gene

  • FMR1 Intronic Transcript 1 2 3 5
  • FMR1 Intronic Transcript 1 (Non-Protein Coding) 2 3
  • Fragile X Mental Retardation Syndrome Protein 3
  • FMR1 3

External Ids for FMR1-IT1 Gene

Previous GeneCards Identifiers for FMR1-IT1 Gene

  • GC00U933127
  • GC0XP147030

Summaries for FMR1-IT1 Gene

GeneCards Summary for FMR1-IT1 Gene

FMR1-IT1 (FMR1 Intronic Transcript 1) is an RNA Gene, and is affiliated with the non-coding RNA class.

Additional gene information for FMR1-IT1 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for FMR1-IT1 Gene

Genomics for FMR1-IT1 Gene

Regulatory Elements for FMR1-IT1 Gene

Enhancers for FMR1-IT1 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH0XH147908 1 ENCODE 12.8 -34.3 -34347 7.7 PKNOX1 ATF1 FOXA2 SIN3A FEZF1 ZNF2 ZNF121 GLIS2 ELK1 ZNF143 FMR1-IT1 FMR1 FMR1-AS1
GH0XH148609 1 Ensembl ENCODE 9.7 +663.2 663232 1.3 SMARCA5 ZNF140 JUNB ELF1 DPF2 BATF EED IKZF1 NBN ETV6 LINC00893 IDS2 FMR1-IT1 AFF2-IT1 RN7SKP267
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around FMR1-IT1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for FMR1-IT1 Gene

Genomic Locations for FMR1-IT1 Gene
643 bases
Plus strand

Genomic View for FMR1-IT1 Gene

Genes around FMR1-IT1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
FMR1-IT1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for FMR1-IT1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for FMR1-IT1 Gene

Proteins for FMR1-IT1 Gene

Post-translational modifications for FMR1-IT1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for FMR1-IT1 Gene

Domains & Families for FMR1-IT1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for FMR1-IT1 Gene

Function for FMR1-IT1 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for FMR1-IT1 Gene

Localization for FMR1-IT1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for FMR1-IT1 Gene

Pathways & Interactions for FMR1-IT1 Gene

SuperPathways for FMR1-IT1 Gene

No Data Available

Interacting Proteins for FMR1-IT1 Gene

Gene Ontology (GO) - Biological Process for FMR1-IT1 Gene


No data available for Pathways by source and SIGNOR curated interactions for FMR1-IT1 Gene

Drugs & Compounds for FMR1-IT1 Gene

No Compound Related Data Available

Transcripts for FMR1-IT1 Gene

mRNA/cDNA for FMR1-IT1 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for FMR1-IT1 Gene

No ASD Table

Relevant External Links for FMR1-IT1 Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for FMR1-IT1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for FMR1-IT1 Gene

genes like me logo Genes that share expression patterns with FMR1-IT1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for FMR1-IT1 Gene

Orthologs for FMR1-IT1 Gene

Evolution for FMR1-IT1 Gene

Gene Tree for FMR1-IT1 (if available)
Gene Tree for FMR1-IT1 (if available)

No data available for Orthologs for FMR1-IT1 Gene

Paralogs for FMR1-IT1 Gene

No data available for Paralogs for FMR1-IT1 Gene

Variants for FMR1-IT1 Gene

Relevant External Links for FMR1-IT1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for FMR1-IT1 Gene

Disorders for FMR1-IT1 Gene

No disorders were found for FMR1-IT1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for FMR1-IT1 Gene

Publications for FMR1-IT1 Gene

No publications were found for FMR1-IT1 Gene.

Products for FMR1-IT1 Gene

Sources for FMR1-IT1 Gene

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