Free for academic non-profit institutions. Other users need a Commercial license

Aliases for FMR1-AS1 Gene

Subcategory (RNA class) for FMR1-AS1 Gene


Quality Score for this RNA gene is


Aliases for FMR1-AS1 Gene

  • FMR1 Antisense RNA 1 2 3
  • FMR1 Antisense RNA 1 (Non-Protein Coding) 2 3
  • ASFMR1 3 6
  • Antisense Fragile X Mental Retardation Protein Variant A 3
  • Antisense Fragile X Mental Retardation Protein 2
  • FMR1 Antisense RNA (Non-Protein Coding) 2
  • FMR1-AS 3
  • FMR1AS1 6
  • FMR1AS 3
  • FMR4 3

External Ids for FMR1-AS1 Gene

ORGUL Members for FMR1-AS1 Gene

Previous HGNC Symbols for FMR1-AS1 Gene

  • FMR1AS
  • FMR1-AS

Previous GeneCards Identifiers for FMR1-AS1 Gene

  • GC0XM146993

Summaries for FMR1-AS1 Gene

GeneCards Summary for FMR1-AS1 Gene

FMR1-AS1 (FMR1 Antisense RNA 1) is an RNA Gene, and is affiliated with the antisense RNA class.

Gene Wiki entry for FMR1-AS1 Gene

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for FMR1-AS1 Gene

Genomics for FMR1-AS1 Gene

Genomic Location for FMR1-AS1 Gene

147,909,431 bp from pter
147,922,158 bp from pter
12,728 bases
Minus strand

Genomic View for FMR1-AS1 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for FMR1-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for FMR1-AS1 Gene

No data available for Regulatory Elements for FMR1-AS1 Gene

Proteins for FMR1-AS1 Gene

Post-translational modifications for FMR1-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for FMR1-AS1 Gene

Domains for FMR1-AS1 Gene

Gene Families for FMR1-AS1 Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with FMR1-AS1: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for FMR1-AS1 Gene

Function for FMR1-AS1 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for FMR1-AS1 Gene

Localization for FMR1-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for FMR1-AS1 Gene

Pathways for FMR1-AS1 Gene

SuperPathways for FMR1-AS1 Gene

No Data Available

Interacting Proteins for FMR1-AS1 Gene

Gene Ontology (GO) - Biological Process for FMR1-AS1 Gene


No data available for Pathways by source for FMR1-AS1 Gene

Transcripts for FMR1-AS1 Gene

mRNA/cDNA for FMR1-AS1 Gene

(11) Additional mRNA sequences :
(6) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for FMR1-AS1 Gene

FMR1 antisense RNA 1:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for FMR1-AS1 Gene

No ASD Table

Relevant External Links for FMR1-AS1 Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for FMR1-AS1 Gene

mRNA expression in normal human tissues for FMR1-AS1 Gene

SOURCE GeneReport for Unigene cluster for FMR1-AS1 Gene Hs.561999

genes like me logo Genes that share expressions with FMR1-AS1: view

Primer Products

  • QuantiTect SYBR Green Assays in human,mouse,rat
  • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
  • QuantiFast Probe-based Assays in human,mouse,rat

In Situ Assay Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , mRNA Expression by UniProt/SwissProt and Expression partners for FMR1-AS1 Gene

Orthologs for FMR1-AS1 Gene

Evolution for FMR1-AS1 Gene

Gene Tree for FMR1-AS1 (if available)
Gene Tree for FMR1-AS1 (if available)

No data available for Orthologs for FMR1-AS1 Gene

Paralogs for FMR1-AS1 Gene

No data available for Paralogs for FMR1-AS1 Gene

Variants for FMR1-AS1 Gene

Sequence variations from dbSNP and Humsavar for FMR1-AS1 Gene

SNP ID Clin Chr 0X pos Sequence Context AA Info Type MAF
rs5904813 -- 147,909,202(+) AAATG(C/T)CTCAG downstream-variant-500B
rs12687865 -- 147,909,842(+) AACTA(A/G)GTGTA nc-transcript-variant
rs144973016 -- 147,909,259(+) AGAGA(C/G)AGGAG downstream-variant-500B
rs149057009 -- 147,909,286(+) AGAGA(A/G)GACTT downstream-variant-500B
rs183481721 -- 147,909,206(+) GTCTC(A/C)GTTTT downstream-variant-500B

Structural Variations from Database of Genomic Variants (DGV) for FMR1-AS1 Gene

Variant ID Type Subtype PubMed ID
nsv7141 CNV Loss 18451855

Relevant External Links for FMR1-AS1 Gene

HapMap Linkage Disequilibrium report

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for FMR1-AS1 Gene

Disorders for FMR1-AS1 Gene

No disorders were found for FMR1-AS1 Gene.

No data available for MalaCards , OMIM , UniProtKB/Swiss-Prot , University of Copenhagen DISEASES , Novoseek inferred disease relationships , Genatlas and External Links for FMR1-AS1 Gene

Publications for FMR1-AS1 Gene

  1. An antisense transcript spanning the CGG repeat region of FMR1 is upregulated in premutation carriers but silenced in full mutation individuals. (PMID: 17921506) Ladd P.D. … Filippova G.N. (Hum. Mol. Genet. 2007) 2 3
  2. A novel RNA transcript with antiapoptotic function is silenced in fragile X syndrome. (PMID: 18213394) Khalil A.M. … Wahlestedt C. (PLoS ONE 2008) 2 3
  3. De novo microduplication of the FMR1 gene in a patient with developmental delay, epilepsy and hyperactivity. (PMID: 22549406) Vengoechea J. … Tassone F. (Eur. J. Hum. Genet. 2012) 3
  4. Xq27 FRAXA locus is a strong candidate for dyslexia: evidence from a genome-wide scan in French families. (PMID: 23307483) Huc-Chabrolle M. … Bonnet-Brilhault F. (Behav. Genet. 2013) 3
  5. Role of CTCF protein in regulating FMR1 locus transcription. (PMID: 23874213) Lanni S. … Neri G. (PLoS Genet. 2013) 3

Products for FMR1-AS1 Gene

Sources for FMR1-AS1 Gene

Back to Top