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Aliases for FLVCR1-AS1 Gene

Subcategory (RNA class) for FLVCR1-AS1 Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for FLVCR1-AS1 Gene

  • FLVCR1 Antisense RNA 1 (Head To Head) 2 3 5
  • FLVCR1 Antisense RNA 1 (Non-Protein Coding) 2 3
  • FLVCR1 Antisense RNA 1 2 4
  • LQK1 3 4
  • Non-Protein Coding RNA 292 2
  • NCRNA00292 3

External Ids for FLVCR1-AS1 Gene

Previous HGNC Symbols for FLVCR1-AS1 Gene

  • NCRNA00292

Previous GeneCards Identifiers for FLVCR1-AS1 Gene

  • GC01M213030

Summaries for FLVCR1-AS1 Gene

GeneCards Summary for FLVCR1-AS1 Gene

FLVCR1-AS1 (FLVCR1 Antisense RNA 1 (Head To Head)) is an RNA Gene, and is affiliated with the non-coding RNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for FLVCR1-AS1 Gene

Genomics for FLVCR1-AS1 Gene

Regulatory Elements for FLVCR1-AS1 Gene

Enhancers for FLVCR1-AS1 Gene
GeneHancer Identifier Score Enhancer Sources TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Other Gene Targets for Enhancer

Enhancers around FLVCR1-AS1 on UCSC Golden Path with GeneCards custom track

Promoters for FLVCR1-AS1 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters

ENSRs around FLVCR1-AS1 on UCSC Golden Path with GeneCards custom track

Genomic Location for FLVCR1-AS1 Gene

Chromosome:
1
Start:
212,852,108 bp from pter
End:
212,858,138 bp from pter
Size:
6,031 bases
Orientation:
Minus strand

Genomic View for FLVCR1-AS1 Gene

Genes around FLVCR1-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
FLVCR1-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for FLVCR1-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for FLVCR1-AS1 Gene

Proteins for FLVCR1-AS1 Gene

  • Protein details for FLVCR1-AS1 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q8TAF5-LQK1_HUMAN
    Recommended name:
    Putative uncharacterized protein LQK1
    Protein Accession:
    Q8TAF5

    Protein attributes for FLVCR1-AS1 Gene

    Size:
    88 amino acids
    Molecular mass:
    10021 Da
    Quaternary structure:
    No Data Available

neXtProt entry for FLVCR1-AS1 Gene

Proteomics data for FLVCR1-AS1 Gene at MOPED

Post-translational modifications for FLVCR1-AS1 Gene

  • Modification sites at PhosphoSitePlus
  • Modification sites at neXtProt

No data available for DME Specific Peptides for FLVCR1-AS1 Gene

Domains & Families for FLVCR1-AS1 Gene

Protein Domains for FLVCR1-AS1 Gene

ProtoNet:

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with FLVCR1-AS1: view

No data available for Gene Families , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for FLVCR1-AS1 Gene

Function for FLVCR1-AS1 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for FLVCR1-AS1 Gene

Localization for FLVCR1-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for FLVCR1-AS1 Gene

Pathways & Interactions for FLVCR1-AS1 Gene

SuperPathways for FLVCR1-AS1 Gene

No Data Available

Interacting Proteins for FLVCR1-AS1 Gene

Gene Ontology (GO) - Biological Process for FLVCR1-AS1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for FLVCR1-AS1 Gene

Drugs & Compounds for FLVCR1-AS1 Gene

No Compound Related Data Available

Transcripts for FLVCR1-AS1 Gene

mRNA/cDNA for FLVCR1-AS1 Gene

(5) Additional mRNA sequences :
(3) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for FLVCR1-AS1 Gene

FLVCR1 antisense RNA 1 (head to head):
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for FLVCR1-AS1 Gene

No ASD Table

Relevant External Links for FLVCR1-AS1 Gene

GeneLoc Exon Structure for
FLVCR1-AS1
ECgene alternative splicing isoforms for
FLVCR1-AS1

Expression for FLVCR1-AS1 Gene

mRNA expression in normal human tissues for FLVCR1-AS1 Gene

SOURCE GeneReport for Unigene cluster for FLVCR1-AS1 Gene Hs.552649

mRNA Expression by UniProt/SwissProt for FLVCR1-AS1 Gene

Q8TAF5-LQK1_HUMAN
Tissue specificity: Expressed in a wide variety of tissues.
genes like me logo Genes that share expression patterns with FLVCR1-AS1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression and Protein tissue co-expression partners for FLVCR1-AS1 Gene

Orthologs for FLVCR1-AS1 Gene

Evolution for FLVCR1-AS1 Gene

ENSEMBL:
Gene Tree for FLVCR1-AS1 (if available)
TreeFam:
Gene Tree for FLVCR1-AS1 (if available)

No data available for Orthologs for FLVCR1-AS1 Gene

Paralogs for FLVCR1-AS1 Gene

No data available for Paralogs for FLVCR1-AS1 Gene

Variants for FLVCR1-AS1 Gene

Sequence variations from dbSNP and Humsavar for FLVCR1-AS1 Gene

SNP ID Clin Chr 01 pos Sequence Context AA Info Type
rs12022540 -- 212,856,241(+) GGGGC(A/G)GGCGG downstream-variant-500B
rs77427203 -- 212,856,249(+) CGGAG(C/G)GGGGG downstream-variant-500B
rs76542479 -- 212,856,215(+) AAAAA(A/G)GCAGG downstream-variant-500B
rs80336785 -- 212,856,216(+) AAAAA(A/G)CAGGG downstream-variant-500B
rs201146721 -- 212,856,128(+) AAAAA(-/A)GAAAG downstream-variant-500B

Relevant External Links for FLVCR1-AS1 Gene

HapMap Linkage Disequilibrium report
FLVCR1-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for FLVCR1-AS1 Gene

Disorders for FLVCR1-AS1 Gene

Relevant External Links for FLVCR1-AS1

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
FLVCR1-AS1

No disorders were found for FLVCR1-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for FLVCR1-AS1 Gene

Publications for FLVCR1-AS1 Gene

  1. Genomic structure and evolutionary context of the human feline leukemia virus subgroup C receptor (hFLVCR) gene: evidence for block duplications and de novo gene formation within duplicons of the hFLVCR locus. (PMID: 11943475) Lipovich L. … Quigley J.G. (Gene 2002) 2 3 4 67
  2. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 3

Products for FLVCR1-AS1 Gene

Sources for FLVCR1-AS1 Gene

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