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Category   Symbol Source: HGNC EntrezGene Ensembl GeneCards RNA genes CroW21
GIFtS

FLT4 Gene

protein-coding   GIFtS: 77
GCID: GC05M180028

fms-related tyrosine kinase 4

 Explore 101 diseases affiliated with
FLT4 via our new
 Human Malady Compendium 
Biological research products
for FLT4
    

(According to 1HGNC, 2Entrez Gene,
3UniProtKB/Swiss-Prot, 4UniProtKB/TrEMBL, 5OMIM, 6GeneLoc, 7Ensembl, 8DME, 9miRBase, and/or 10fRNAdb)
About This Section

Aliases
Fms-Related Tyrosine Kinase 41 2     LMPH1A2 5
VEGFR31 2 3 5     FLT412
PCL1 2 5     Soluble VEGFR3 Variant 12
Fms-Like Tyrosine Kinase 42 3     Soluble VEGFR3 Variant 22
Tyrosine-Protein Kinase Receptor FLT42 3     Soluble VEGFR3 Variant 32
FLT-42 3     Vascular Endothelial Growth Factor Receptor 32
VEGFR-32 3     EC 2.7.108
EC 2.7.10.13 8     

External Ids:    HGNC: 37671   Entrez Gene: 23242   Ensembl: ENSG000000372807   OMIM: 1363525   UniProtKB: P359163   

Export aliases for FLT4 gene to outside databases

Previous GC identifers: GC05M180162 GC05M181012 GC05M180139 GC05M180132 GC05M179962 GC05M174752


(According to Entrez Gene, Tocris Bioscience, Wikipedia's Gene Wiki, PharmGKB,
UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL)
About This Section

Entrez Gene summary for FLT4:
This gene encodes a tyrosine kinase receptor for vascular endothelial growth factors C and D. The protein is thought to
be involved in lymphangiogenesis and maintenance of the lymphatic endothelium. Mutations in this gene cause hereditary
lymphedema type IA. (provided by RefSeq, Jul 2008)

UniProtKB/Swiss-Prot: VGFR3_HUMAN, P35916
Function: Tyrosine-protein kinase that acts as a cell-surface receptor for VEGFC and VEGFD, and plays an essential role
in adult lymphangiogenesis and in the development of the vascular network and the cardiovascular system during
embryonic development. Promotes proliferation, survival and migration of endothelial cells, and regulates angiogenic
sprouting. Signaling by activated FLT4 leads to enhanced production of VEGFC, and to a lesser degree VEGFA, thereby
creating a positive feedback loop that enhances FLT4 signaling. Modulates KDR signaling by forming heterodimers. The
secreted isoform 3 may function as a decoy receptor for VEGFC and/or VEGFD and play an important role as a negative
regulator of VEGFC-mediated lymphangiogenesis and angiogenesis. Binding of vascular growth factors to isoform 1 or
isoform 2 leads to the activation of several signaling cascades; isoform 2 seems to be less efficient in signal
transduction, because it has a truncated C-terminus and therefore lacks several phosphorylation sites. Mediates
activation of the MAPK1/ERK2, MAPK3/ERK1 signaling pathway, of MAPK8 and the JUN signaling pathway, and of the AKT1
signaling pathway. Phosphorylates SHC1. Mediates phosphorylation of PIK3R1, the regulatory subunit of
phosphatidylinositol 3-kinase. Promotes phosphorylation of MAPK8 at 'Thr-183' and 'Tyr-185', and of AKT1 at 'Ser-473'

summary for FLT4:
Vascular endothelial growth factor is a signaling protein involved in the regulation of angiogenesis and
vasculogenesis. VEGF binds to and activates a receptor tyrosine kinase, VEGFR. Three VEGFR isoforms have
been identified in humans; VEGFR-1 (Flt-1), VEGFR-2 (KDR/Flk-1) and VEGFR-3 (Flt-4). VEGFR-2 mediates the
majority of cellular responses to VEGF. VEGFR-1 is thought to modulate VEGFR-2 signaling or to act as a
dummy/decoy receptor to sequester VEGF away from VEGFR-2.

Gene Wiki entry for FLT4


(According to GeneLoc and/or HGNC, and/or
Entrez Gene (NCBI build 37),
and/or miRBase,
Genomic Views according to UCSC (hg19) and Ensembl (release 69), Regulatory elements and Epigenetics data according to QIAGEN, SABiosciences, and/or SwitchGear Genomics)
About This Section
RefSeq DNA sequence:
NC_000005.9  NC_018916.1  NT_023133.13  
Regulatory elements:
   SABiosciences Regulatory transcription factor binding sites in the FLT4 gene promoter:
         GR   AP-1   ATF-2   c-Jun   GR-alpha   
         Other transcription factors

SwitchGear Promoter luciferase reporter plasmidFLT4 promoter sequence
   Search SABiosciences Chromatin IP Primers for FLT4

Epigenetics:
QIAGEN PyroMark CpG Assay predesigned Pyrosequencing DNA Methylation assays in human, mouse, rat FLT4


Genomic Location:
Genomic View: UCSC Golden Path with GeneCards custom track

Entrez Gene cytogenetic band: 5q35.3   Ensembl cytogenetic band:  5q35.3   HGNC cytogenetic band: 5q34-q35

FLT4 Gene in genomic location: bands according to Ensembl, locations according to (and/or Entrez Gene and/or Ensembl if different)
FLT4 gene location

GeneLoc information about chromosome 5         GeneLoc Exon Structure

GeneLoc location for GC05M180028:  view genomic region     (about GC identifiers)

Start:
180,028,506 bp from pter      End:
180,076,624 bp from pter
Size:
48,119 bases      Orientation:
minus strand

(According to 1UniProtKB, HORDE, neXtProt, Ensembl, and/or Reactome, Modification sites according to 2PhosphoSitePlus, Specific Peptides from DME, Protein expression images according to data from SPIRE MOPED and PaxDb, RefSeq according to NCBI, PDB rendering according to OCA and/or Proteopedia, Recombinant Proteins from EMD Millipore, R&D Systems, GenScript, Enzo Life Sciences, OriGene, Novus Biologicals, Sino Biological, ProSpec, and/or Uscn,
Biochemical Assays by EMD Millipore, R&D Systems, OriGene, GenScript, Cell Signaling Technology, Enzo Life Sciences, and/or Uscn, Ontologies according to Gene Ontology Consortium 01 Mar 2013 and Entrez Gene, Antibodies by EMD Millipore, R&D Systems, GenScript, Cell Signaling Technology, OriGene, Novus Biologicals, Thermo Fisher Scientific, Abcam, and/or Uscn)
About This Section

UniProtKB/Swiss-Prot: VGFR3_HUMAN, P35916 (See protein sequence)
Recommended Name: Vascular endothelial growth factor receptor 3 precursor  
Size: 1363 amino acids; 152757 Da
Subunit: Interacts with VEGFC and VEGFD. Monomer in the absence of bound VEGFC or VEGFD. Homodimer in the presence of
bound VEGFC or VEGFD. Can also form a heterodimer with KDR. Interacts with PTPN14; the interaction is enhanced by
stimulation with VEGFC. Interacts with CRK, GRB2, PTK2/FAK1, SHC1, PIK3R1 and PTPN11/SHP-2. Identified in a complex
with SRC and ITGB1
Subcellular location: Cell membrane; Single-pass type I membrane protein. Cytoplasm. Nucleus. Note=Ligand-mediated
autophosphorylation leads to rapid internalization
Subcellular location: Isoform 1: Cell membrane; Single-pass type I membrane protein. Note=Ligand-mediated
autophosphorylation leads to rapid internalization
Subcellular location: Isoform 2: Cell membrane; Single-pass type I membrane protein
Subcellular location: Isoform 3: Secreted. Cytoplasm
Sequence caution: Sequence=CAA48290.1; Type=Erroneous initiation; Note=Translation N-terminally shortened;
Secondary accessions: A8K6L4 B5A926 Q16067 Q86W07 Q86W08
Alternative splicing: 3 isoforms:  P35916-2   P35916-1   P35916-3   

Explore the universe of human proteins at neXtProt for FLT4: NX_P35916

Post-translational modifications:

  • Autophosphorylated on tyrosine residues upon ligand binding. Autophosphorylation occurs in trans, i.e. one subunit of
  • the dimeric receptor phosphorylates tyrosine residues on the other subunit. Phosphorylation in response to H(2)O(2) is
    mediated by a process that requires SRC and PRKCD activity. Phosphorylation at Tyr-1068 is required for
    autophosphorylation at additional tyrosine residues. Phosphorylation at Tyr-1063 and Tyr-1337 is important for
    interaction with CRK and subsequent activation of MAPK8. Phosphorylation at Tyr-1230, Tyr-1231 and Tyr-1337 is
    important for interaction with GRB2 and subsequent activation of the AKT1 and MAPK1/ERK2 and/or MAPK3/ERK1 signaling
    pathways. In response to endothelial cell adhesion onto collagen, can also be phosphorylated in the absence of FLT4
    kinase activity by SRC at Tyr-830, Tyr-833, Tyr-853, Tyr-1063, Tyr-1333, and Tyr-13371
  • View modification sites using PhosphoSitePlus2
  • View neXtProt modification sites for NX_P35916

  • 4/37 DME Specific Peptides for FLT4 (P35916) (see all 37)
     GTRMRAP  QVARGME  KHCHKKY  RDLAARN 

    FLT4 Protein expression data from MOPED and PaxDb:    About this image 
    Estimated protein expression log10 (pmol).

    REFSEQ proteins (2 alternative transcripts): 
    NP_002011.2  NP_891555.2  

    ENSEMBL proteins: 
     ENSP00000261937   ENSP00000377016   ENSP00000426057   ENSP00000421535  
    Reactome Protein details: P35916
    Human Recombinant Protein Products: 
    EMD Millipore Purified and/or Recombinant FLT4 Protein
    R&D Systems Recombinant & Natural Proteins for FLT4 (VEGF R3/Flt-4)
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    Novus Biologicals FLT4 Proteins
    Novus Biologicals FLT4 Lysate
    Sino Biological Recombinant Protein for FLT4
    ProSpec Recombinant Protein for FLT4
    Uscn Proteins for FLT4

    Gene Ontology (GO): 5 cellular component terms (GO ID links to tree view):    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0005576extracellular region IEA--
    GO:0005634nucleus IEA--
    GO:0005737cytoplasm IEA--
    GO:0005886plasma membrane TAS--
    GO:0005887integral to plasma membrane IEA--


    FLT4 for ontologies           About GeneDecksing



    FLT4 Antibody Products: 
    EMD Millipore Mono- and Polyclonal Antibodies for the study of FLT4
    R&D Systems Antibodies for FLT4 (VEGF R3/Flt-4)
    Cell Signaling Technology (CST) Antibodies for FLT4  (VEGFR-3)
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    ThermoFisher Antibodies for FLT4

    Assay Products for FLT4: 
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    R&D Systems ELISAs for FLT4 (VEGF R3/Flt-4)         (see all)
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    Browse Enzo Life Sciences for kits & assays
    Uscn ELISAs and CLIAs for FLT4


    (According to InterPro, ProtoNet, UniProtKB, and/or BLOCKS, Sets of similar genes according to GeneDecks)
    About This Section

    FLT4 for domains           About GeneDecksing

    5/14 InterPro domains/families (see all 14):
     IPR003598 Ig_sub2
     IPR017441 Protein_kinase_ATP_BS
     IPR013098 Ig_I-set
     IPR011009 Kinase-like_dom
     IPR009137 Tyr_kinase_VEGFR3_rcpt_N

    Graphical View of Domain Structure for InterPro Entry P35916

    ProtoNet protein and cluster: P35916

    5 Blocks protein families:
    IPB001824 Receptor tyrosine kinase
    IPB003598 Immunoglobulin C-2 type
    IPB008266 Tyrosine protein kinase
    IPB009134 Vascular endothelial growth factor receptor signature
    IPB013098 Immunoglobulin I-set


    UniProtKB/Swiss-Prot: VGFR3_HUMAN, P35916
    Domain: The first and second Ig-like C2-type (immunoglobulin-like) domains are sufficient for VEGFC binding
    Similarity: Belongs to the protein kinase superfamily. Tyr protein kinase family. CSF-1/PDGF receptor subfamily
    Similarity: Contains 7 Ig-like C2-type (immunoglobulin-like) domains
    Similarity: Contains 1 protein kinase domain


    (According to 1UniProtKB, Genatlas, LifeMap Discovery™, IUBMB, and/or 2DME, Human phenotypes from GenomeRNAi, Animal models from MGI Mar 06 2013,
    bound targets from SABiosciences, miRNA Gene Targets from miRTarBase shRNA from OriGene, RNAi from EMD Millipore, siRNAs from OriGene, QIAGEN, microRNA from QIAGEN, Gene Editing from DNA2.0, Clones from EMD Millipore, OriGene, SwitchGear Genomics, GenScript, Sino Biological, DNA2.0, and Vector BioLabs, Cell Lines from GenScript, LifeMap BioReagents, In Situ Hybridization Assays from Advanced Cell Diagnostics, Ontologies according to Gene Ontology Consortium 01 Mar 2013 via Entrez Gene.)
    About This Section

    Function Summary:

         UniProtKB/Swiss-Prot: VGFR3_HUMAN, P35916
    Function: Tyrosine-protein kinase that acts as a cell-surface receptor for VEGFC and VEGFD, and plays an essential role
    in adult lymphangiogenesis and in the development of the vascular network and the cardiovascular system during
    embryonic development. Promotes proliferation, survival and migration of endothelial cells, and regulates angiogenic
    sprouting. Signaling by activated FLT4 leads to enhanced production of VEGFC, and to a lesser degree VEGFA, thereby
    creating a positive feedback loop that enhances FLT4 signaling. Modulates KDR signaling by forming heterodimers. The
    secreted isoform 3 may function as a decoy receptor for VEGFC and/or VEGFD and play an important role as a negative
    regulator of VEGFC-mediated lymphangiogenesis and angiogenesis. Binding of vascular growth factors to isoform 1 or
    isoform 2 leads to the activation of several signaling cascades; isoform 2 seems to be less efficient in signal
    transduction, because it has a truncated C-terminus and therefore lacks several phosphorylation sites. Mediates
    activation of the MAPK1/ERK2, MAPK3/ERK1 signaling pathway, of MAPK8 and the JUN signaling pathway, and of the AKT1
    signaling pathway. Phosphorylates SHC1. Mediates phosphorylation of PIK3R1, the regulatory subunit of
    phosphatidylinositol 3-kinase. Promotes phosphorylation of MAPK8 at 'Thr-183' and 'Tyr-185', and of AKT1 at 'Ser-473'
    Catalytic activity: ATP + a [protein]-L-tyrosine = ADP + a [protein]-L-tyrosine phosphate
    Enzyme regulation: Present in an inactive conformation in the absence of bound ligand. Binding of VEGFC or VEGFD leads
    to dimerization and activation by autophosphorylation on tyrosine residues. Inhibited by MAZ51

         Genatlas biochemistry entry for FLT4:
    fms-related receptor t tyrosine kinase 4,expressed on the surface on endothelial cells

    Enzyme Numbers (IUBMB): EC 2.7.10.11 2 EC 2.7.102

    miRNA
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    hsa-miR-214* hsa-miR-2276 hsa-miR-1236
    SwitchGear 3'UTR luciferase reporter plasmidFLT4 3' UTR sequence
    Inhib. RNA
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    Gene Editing
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    Clone
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    Browse Clones for the Expression of Recombinant Proteins Available from EMD Millipore
    OriGene Myc/DDK tagged cDNA clones in CMV expression vector in human, mouse, rat for FLT4 (see all 6)
    OriGene untagged cDNA clones in CMV expression vector in human, mouse, rat for FLT4 (see all 4)
    OriGene custom cloning services – gene synthesis, subcloning, mutagenesis, variant library, vector shuttling 
    GenScript: all cDNA clones in your preferred vector (see all 2): FLT4 (NM_002020)
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    Vector BioLabs ready-to-use adenovirus/AAV for human, mouse, rat FLT4 

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    Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for FLT4

    Gene Ontology (GO): 5/6 molecular function terms (GO ID links to tree view) (see all 6):    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0004714transmembrane receptor protein tyrosine kinase activity IMP7898938
    GO:0005021vascular endothelial growth factor-activated receptor activity IMP11532940
    GO:0005515protein binding IPI--
    GO:0005524ATP binding IEA--
    GO:0019838growth factor binding IPI9435229


    FLT4 for ontologies           About GeneDecksing


    3 GenomeRNAi human phenotypes for FLT4:
     Decreased substrate adherent c  Increased cilium length after   Increased mitotic index 

    Animal Models:
         14 MGI mutant phenotypes (inferred from 8 alleles(MGI details for Flt4):
     adipose tissue  cardiovascular system  digestive/alimentary  embryogenesis  growth/size 
     homeostasis/metabolism  immune system  integument  liver/biliary system  mortality/aging 
     muscle  no phenotypic analysis  normal  reproductive system 

    FLT4 for phenotypes           About GeneDecksing


    (Pathways according to EMD Millipore, R&D Systems, Cell Signaling Technology, KEGG, PharmGKB, BioSystems, Reactome, Tocris Bioscience, GeneGo (Thomson Reuters), QIAGEN, and/or UniProtKB, Sets of similar genes according to GeneDecks, Interaction Networks according to SABiosciences, and/or STRING, Interactions according to 1UniProtKB, 2MINT, 3I2D, and/or 4STRING, with links to IntAct and Ensembl, Ontologies according to Gene Ontology Consortium 01 Mar 2013 via Entrez Gene).
    About This Section

    Unified GeneCards pathways - 5/25 super-pathways (see all 25About this table 
    See pathways by source

    Super-pathwaycontained gene-specific pathways
    1Apoptotic Pathways in Synovial Fibroblasts
    8/12 pathways (see all 12)
    Apoptotic Pathways in Synovial Fibroblasts1.00
    Cellular Apoptosis Pathway0.65
    p53 Mediated Apoptosis0.84
    ERK5 Signaling0.61
    Mitochondrial Apoptosis0.73
    eIF2 Pathway0.60
    Telomerase Components in Cell Signaling0.72
    Rac1 Pathway0.58
    2GPCR Pathway
    GPCR Pathway1.00
    Estrogen Pathway0.55
    Ras Pathway0.62
    Pancreatic Adenocarcinoma0.55
    Breast Cancer Regulation by Stathmin10.58
    Paxillin Interactions0.53
    NFAT in Immune Response0.58
    P2Y Receptor Signaling0.38
    3Rho Family GTPases
    Rho Family GTPases1.00
    MAPK Signaling0.51
    ERK Signaling0.61
    ILK Signaling0.45
    Molecular Mechanisms of Cancer0.51
    4TGF-Beta Pathway
    TGF-Beta Pathway1.00
    JAK-STAT Pathway0.57
    MAPK Family Pathway0.60
    JNK Pathway0.50
    5Nanog in Mammalian ESC Pluripotency
    Nanog in Mammalian ESC Pluripotency1.00
    14-3-3 Induced Intracellular Signaling0.59
    GSK3 Signaling0.61
    eNOS Signaling0.48

    Pathway sources
    See GeneCards unified pathways
    Show all pathways

    1 EMD Millipore Pathway for FLT4
        Development VEGF-family signaling

    5/56 Downloadable PowerPoint Slides of QIAGEN Pathway Central Maps for FLT4 (see all 56)
        Nuclear Receptor Activation by Vitamin-A
    Paxillin Interactions
    Telomerase Components in Cell Signaling
    Mitochondrial Apoptosis
    Molecular Mechanisms of Cancer

    2 Cell Signaling Technology (CST) Pathways for FLT4
        Angiogenesis
    Tyrosine Kinases / Adaptors

    4 Tocris Bioscience Pathways for FLT4
        Akt Pathway
    Apoptosis Pathway
    NF-kappaB Pathway
    VEGF Pathway

    1 GeneGo (Thomson Reuters) Pathway for FLT4
        Development VEGF-family signaling

    2 BioSystems Pathways for FLT4 
        Signaling events mediated by VEGFR1 and VEGFR2
    VEGFR3 signaling in lymphatic endothelium

    4        Reactome Pathways for FLT4
        Signaling by VEGF
    VEGF binds to VEGFR leading to receptor dimerization
    VEGF ligand-receptor interactions
    Signal Transduction

    2 PharmGKB Pathways for FLT4
        Sorafenib Pharmacodynamics
    Vemurafenib Pathway, Pharmacodynamics

    2         Kegg Pathways  (Kegg details for FLT4):
        Cytokine-cytokine receptor interaction
    Focal adhesion


    FLT4 for pathways           About GeneDecksing

    Interactions:

        SABiosciences Gene Network CentralTM Interacting Genes and Proteins Network for FLT4

    STRING Interaction Network Preview (showing 5 interactants - click image to see 25)

    5/43 Interacting proteins for FLT4 (P359161, 2, 3 ENSP000002619374) via UniProtKB, MINT, STRING, and/or I2D (see all 43)
    InteractantInteraction Details
    GeneCardExternal ID(s)
    VEGFCP497671, 3, ENSP000002801934EBI-1005467,EBI-3405539 I2D: score=3 STRING: ENSP00000280193
    KDRP359681, 2, 3, ENSP000002639234EBI-1005467,EBI-1005487 MINT-7938244 MINT-7938235 I2D: score=4 STRING: ENSP00000263923
    FIGFO439153, ENSP000002979044I2D: score=2 STRING: ENSP00000297904
    SHC1P293533, ENSP000004013034I2D: score=2 STRING: ENSP00000401303
    PTPN11Q061243, ENSP000003409444I2D: score=1 STRING: ENSP00000340944
    About this table

    Gene Ontology (GO): 5/23 biological process terms (GO ID links to tree view) (see all 23):    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0001934positive regulation of protein phosphorylation IMP11532940
    GO:0001938positive regulation of endothelial cell proliferation IMP11532940
    GO:0001944vasculature development ISS--
    GO:0001945lymph vessel development ISS--
    GO:0001946lymphangiogenesis ISS--


    FLT4 for ontologies           About GeneDecksing



    (Chemical Compounds according to UniProtKB, Enzo Life Sciences, EMD Millipore, Tocris Bioscience HMDB, BitterDB, and/or Novoseek, and Drugs according to DrugBank, Enzo Life Sciences, and/or PharmGKB, with drugs/clinical trials/news search links to CenterWatch)
    About This Section

    FLT4 for compounds           About GeneDecksing

    EMD Millipore small molecules for FLT4:
    Small Molecule - inhibitor
    Enzo Life Sciences drugs & compounds for FLT4

    Compounds for FLT4 available from Tocris Bioscience    About this table
    CompoundAction CAS #
    SU 5416 VEGFR inhibitor. Also inhibits KIT, RET, MET and FLT3 [204005-46-9]
    SU 4312Potent inhibitor of VEGFR tyrosine kinase[5812-07-7]
    Sunitinib malate Potent VEGFR, PDGFRbeta and KIT inhibitor [341031-54-7]
    Axitinib Potent VEGFR-1, -2 and -3 inhibitor [319460-85-0]
    ZM 306416 hydrochlorideInhibitor of VEGF receptor tyrosine kinase[690206-97-4]

    2 HMDB Compounds for FLT4    About this table
    CompoundSynonyms CAS #PubMed Ids
    ADPadenosindiphosphorsaeure (see all 8)58-64-0--
    Adenosine triphosphate5'-(tetrahydrogen triphosphate) Adenosine (see all 24)56-65-5--

    2 DrugBank Compounds for FLT4    About this table
    CompoundSynonyms CAS #TypeActionsPubMed Ids
    Sorafenib-- 284461-73-0targetantagonist16133532 16729906 16757355 17296815 16474853
    SunitinibSU11248 (see all 3)557795-19-4targetantagonist16685460 17367763 17296815 17605814 15688612

    10/16 Novoseek chemical compound relationships for FLT4 gene (see all 16)    About this table
    Compound   -log (P-Val)   Hits   PubMed IDs for Articles with Shared Sentences (# sentences)
    vegf 87.8 252 18225391 (8), 15364128 (4), 10831352 (4), 14507895 (4) (see all 99)
    azd 2171 78.4 2 17671138 (1), 17671152 (1)
    tyrosine 66.8 120 11553610 (5), 12881528 (3), 18680722 (2), 16452200 (2) (see all 81)
    zd6474 64.2 1 18177496 (1)
    sorafenib 50.5 6 19089671 (1), 16133532 (1), 17935273 (1), 16757355 (1) (see all 6)
    sunitinib 49.9 2 17605814 (1), 17935273 (1)
    su5416 39.7 1 17169805 (1)
    matrigel 31.1 1 19825968 (1)
    paraffin 20.9 2 17970053 (1), 17327058 (1)
    oxygen 4.43 1 8630024 (1)

    Search CenterWatch for drugs/clinical trials and news about FLT4 / VGFR3 

    (Secondary structures according to fRNAdb,
    GenBank/EMBL/DDBJ Accessions according to
    Unigene (Build 235 Homo sapiens; Mar 10 2013) or GenBank,
    RefSeq according to Entrez Gene,
    DOTS (version 10), and/or AceView, transcript ids from Ensembl with links to UCSC,
    exon structure from GeneLoc, alternative splicing isoforms according to ASD and/or ECgene,
    RNAi Products from EMD Millipore,
    siRNAs from OriGene, QIAGEN, shRNA from OriGene, microRNA from QIAGEN,
    Tagged/untagged cDNA clones from OriGene, SwitchGear Genomics, GenScript, DNA2.0, Vector BioLabs, Primers from OriGene, SABiosciences, and/or QIAGEN )
    About This Section

    REFSEQ mRNAs for FLT4 gene (2 alternative transcripts): 
    NM_002020.4  NM_182925.4  

    Unigene Cluster for FLT4:

    Fms-related tyrosine kinase 4
    Hs.646917  [show with all ESTs]
    Unigene Representative Sequence: NM_182925
    11 Ensembl transcripts including schematic representations, and UCSC links where relevant:
    ENST00000261937(uc003mlz.4) ENST00000502603 ENST00000393347(uc003mma.4 uc011dgz.1 uc011dha.1)
    ENST00000507059(uc003mmb.1) ENST00000502649 ENST00000510000 ENST00000514810
    ENST00000512795 ENST00000424276(uc011dgy.2) ENST00000502293 ENST00000513527


    miRNA
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    Browse OriGene MicroRNA Expression Plasmids
    QIAGEN Custom miScript Target Protector blocks miRNA-binding site of human, mouse, rat FLT4
    3 QIAGEN miScript miRNA Assays for microRNAs that regulate FLT4:
    hsa-miR-214* hsa-miR-2276 hsa-miR-1236
    SwitchGear 3'UTR luciferase reporter plasmidFLT4 3' UTR sequence
    Inhib. RNA
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    Browse for Gene Knock-down Tools from EMD Millipore
    OriGene 29mer shRNA kits in GFP-retroviral vector in human, mouse, rat for FLT4 (see all 7)
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    Additional cDNA sequence: 

    AK291679.1 AK309910.1 AY233382.1 AY233383.1 BC027302.1 EU826564.1 EU826565.1 EU826566.1 
    S66407.1 U43143.1 X68203.1 X69878.1 

    6 DOTS entries:

    DT.209171  DT.91824963  DT.99969842  DT.120877112  DT.120877154  DT.75122823 

    24/96 AceView cDNA sequences (see all 96):

    X68203 AW950567 N30566 AA368926 S66407 BC027302 AA195496 N59553 
    BF593612 CA438330 NM_002020 AA262959 X69878 BQ277698 AA193259 AI090656 
    BE245688 BU617360 U43143 BX475628 CB045179 BE778623 BE245812 BU621870 

    GeneLoc Exon Structure


    (RNA expression data according to H-InvDB, NONCODE, miRBase, and RNAdb, Expression images according to data from BioGPS, Illumina Human BodyMap, and CGAP SAGE, Sets of similar genes according to GeneDecks, in vivo and in vitro expression data from LifeMap Discovery™, plus additional links to Genevestigator, and/or SOURCE, and/or BioGPS, and/or UniProtKB,
    PCR Arrays from SABiosciences, Primers from OriGene, SABiosciences, and/or QIAGEN, In Situ Hybridization Assays from Advanced Cell Diagnostics)
    About This Section

    FLT4 expression in normal human tissues (normalized intensities)
    See probesets specificity/sensitivity at GeneAnnot
    About this imageBioGPS
    CGAP TAG: TTCTGAGAAA

    Microarray
    RNAseq (Illumina Body Map)
    (100×FPKM)½
    SAGE (Serial Analysis of Gene Expression)

    About this image

    FLT4 expression in embryonic tissues and stem cells
    Expression by the Database of Embryonic development, Stem cell research, and Regenerative medicine    About this table
    6 LifeMap In Vivo Development Anatomical Compartments/Cells 
    Tissue Anatomical Compartment CellCategory (developmental path)
    EndotheliumArteriesEndothelial tip cellsEndothelium
    HeartCardinal VeinsVenous Endothelial CellsEndothelium
    LymphLymphatic VesselsLymphatic Endothelial CellsEndothelium
    HeartEndocardiumEndocardial Tube CellsEndocardium
    Skeletal MuscleHyoid Arch MusclesMyoblastsSkeletal Muscle
    Skeletal MuscleMandibular Arch MusclesMyoblastsSkeletal Muscle
    Expression: Positive    Negative     Selective marker
    Experimental details: Curated     Microarrays     In-situ hybridization
    Stem Cell Differentiation: 1 LifeMap Cell 
    NameCategory
    Endothelial-like cells (Derivation and purif...)

    See FLT4 Protein Expression from SPIRE MOPED and PaxDB
    Genevestigator expression for FLT4

    SOURCE GeneReport for Unigene cluster: Hs.646917

    UniProtKB/Swiss-Prot: VGFR3_HUMAN, P35916
    Tissue specificity: Detected in endothelial cells (at protein level). Widely expressed. Detected in fetal spleen, lung
    and brain. Detected in adult liver, muscle, thymus, placenta, lung, testis, ovary, prostate, heart, and kidney

        SABiosciences Expression via Pathway-Focused PCR Arrays including FLT4: 
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              VEGF Signaling in human mouse rat
              Tumor Metastasis in human mouse rat

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    (Orthologs according to 1,2HomoloGene (2older version, for species not in 1newer version), 3euGenes, 4SGD , 5MGI Mar 06 2013, with possible further links to Flybase and/or WormBase, and/or 6Ensembl pan taxonomic compara , Gene Trees according to Ensembl and TreeFam)
    About This Section

    This gene was present in the common ancestor of animals.

    Orthologs for FLT4 gene from 5/16 species (see all 16)    About this table
    Organism Taxonomic
    classification
    Gene Description Human
    Similarity
    Orthology
    Type
    Details
    mouse
    (Mus musculus)
    Mammalia Flt41 , 5 FMS-like tyrosine kinase 41, 5 85.3(n)1
    87.45(a)1
      11 (29.69 cM)5
    142571  NM_008029.31  NP_032055.11 
     496092635 
    chicken
    (Gallus gallus)
    Aves FLT41 fms-related tyrosine kinase 4 72.01(n)
    70.73(a)
      395742  XM_414600.3  XP_414600.2 
    lizard
    (Anolis carolinensis)
    Reptilia FLT46
    --
    69(a)
    1 ↔ 1
    2(139887857-139958529)
    zebrafish
    (Danio rerio)
    Actinopterygii flt41 fms-related tyrosine kinase 4 60.67(n)
    56.68(a)
      30121  NM_130945.1  NP_571020.1 
    fruit fly
    (Drosophila melanogaster)
    Insecta tor3 eggshell pattern formation transmembrane
    receptor more
    50(a)   43E12   --


    ENSEMBL Gene Tree for FLT4 (if available)
    TreeFam Gene Tree for FLT4 (if available) 

    (Paralogs according to 1HomoloGene,
    2Ensembl, and 3SIMAP, Pseudogenes according to 4Pseudogene.org Build 68)
    About This Section
    Paralogs for FLT4 gene
    FGFR42  PDGFRB2  CSF1R2  FGFR32  KIT2  PDGFRA2  RET2  KDR2  
    FGFR12  FGFR22  FLT32  FLT12  
    18/57 SIMAP similar genes for FLT4 using alignment to 7 protein entries:     VGFR3_HUMAN (see all proteins) (see all similar genes):
    VEGFR3    RET    CSF1R    KIT    FLT1    CCDC6-RETa
    CCDC6-RETc    EGFR    TYRO3    JAK2    ABL1    PTK2
    MET    MST1R    NTRK3    EZR-ROS1    FGFR1    EPHA6

    FLT4 for paralogs           About GeneDecksing



    (SNPs/Variants according to the 1NCBI SNP Database, 2Ensembl, 3PupaSUITE, UniProtKB, and DNA2.0, Linkage Disequilibrium by HapMap, Structural Variations(CNVs/InDels/Inversions) from the Database of Genomic Variants, Mutations from the Human Gene Mutation Database (HGMD) and the Locus Specific Mutation Databases (LSDB), Blood group antigen gene mutations by BGMUT, Resequencing Primers from QIAGEN, Cancer Mutation PCR Arrays and Assays and Copy Number PCR Arrays from SABiosciences)
    About This Section

    10/1468 NCBI SNPs in FLT4 are shown (see all 1468    About this table
    Genomic DataTranscription Related DataAllele Frequencies
    SNP IDValidClinical
    significance
    Chr 5 posSequence#AA
    Chg
    TypeMore#Allele
    freq
    PopTotal
    sample
    More
    ----------
    rs1219096571,2
    C,pathogenic180046749(-) ACGGCA/GCCTTC 4 T A mis10--------
    rs342555321,2
    C,F,other180045911(-) AGTCTC/TCCGAG 4 P S mis12Minor allele frequency- T:0.01NA EU 177
    rs1116556521,2
    C,--174769004(+) CTCAGA/CCTCTG 1 -- int13Minor allele frequency- C:0.05NA CSA WA 121
    rs768802591,2
    F,--180028119(+) ACAAAC/GCAACC 1 -- ds50011Minor allele frequency- G:0.03NA 120
    rs716802801,2
    C,--180028138(+) AAAAC-/AAAAAA 1 -- ds50010--------
    rs1413511891,2
    --180028275(+) TGGGCA/GTGGTG 1 -- ds50010--------
    rs1433201791,2
    --180028338(+) GAAGAC/TGGAGG 1 -- ds50010--------
    rs1165573261,2
    F,--180028343(+) CGGAGG/ATTCCA 1 -- ds50011Minor allele frequency- A:0.04WA 118
    rs1480178721,2
    --180028362(+) AGATCA/GCGCCA 1 -- ds50010--------
    rs709739441,2
    C--180028405(+) AAAAGAAA/-CCCAA 1 -- ds50011Minor allele frequency- -:0.00NA 2

    HapMap Linkage Disequilibrium report for FLT4 (180028506 - 180076624 bp)
    Structural Variations (Copy Number Variations, Insertions/Deletions, Inversions)
    Database of Genomic Variants (DGV): 9 variations for FLT4
         7 CNVs: 69265 64395 93400 81160 64396 81161 93399
         2 Indels: 46838 42762
    Human Gene Mutation Database (HGMD): FLT4

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    (in which this Gene is Involved, According to MalaCards, OMIM, UniProtKB, the University of Copenhagen DISEASES database, Novoseek, Genatlas, GeneTests, GAD, HuGE Navigator, and/or TGDB.)
    About This Section

    FLT4 for disorders           About GeneDecksing

    OMIM gene information: 136352   
    OMIM disorders: 153100  602089  
    UniProtKB/Swiss-Prot: VGFR3_HUMAN, P35916
  • Defects in FLT4 are the cause of lymphedema hereditary type 1A (LMPH1A) [MIM:153100]; also known as
  • Nonne-Milroy lymphedema or Milroy disease. Hereditary lymphedema is a chronic disabling condition which results in
    swelling of the extremities due to altered lymphatic flow. Patients with lymphedema suffer from recurrent local
    infections and physical impairment
  • Defects in FLT4 are associated with susceptibility to hemangioma capillary infantile (HCI) [MIM:602089]. HCI
  • are benign, highly proliferative lesions involving aberrant localized growth of capillary endothelium. They are the
    most common tumor of infancy, occurring in up to 10% of all births. Hemangiomas tend to appear shortly after birth and
    show rapid neonatal growth for up to 12 months characterized by endothelial hypercellularity and increased numbers of
    mast cells. This phase is followed by slow involution at a rate of about 10% per year and replacement by fibrofatty
    stroma
  • Note=Plays an important role in tumor lymphangiogenesis, in cancer cell survival, migration, and formation of
  • metastases

    20/101 diseases for FLT4 (see all 101):    About MalaCards
    hereditary lymphedema    lymphedema    hemangioma, capillary infantile, somatic    hemangioma, capillary infantile
    klippel-trenaunay syndrome    hydrops fetalis    tufted angioma    diffuse large b-cell lymphoma
    hemifacial spasm    kaposiform hemangioendothelioma    intracranial arteriovenous malformation    arteriovenous malformation
    orbital lymphangioma    hemangioendothelioma    non-small cell lung carcinoma    b-cell lymphomas
    laryngeal squamous cell carcinoma    squamous cell carcinoma    lymphangioma    hemangioma

    2 diseases from the University of Copenhagen DISEASES database for FLT4:
    Lymphedema     Lymphangioma

    10/79 Novoseek disease relationships for FLT4 gene (see all 79)    About this table

    Disease   -log (P-Val)   Hits   PubMed IDs for Articles with Shared Sentences (# sentences)
    congenital lymphedema 89.3 42 16965327 (5), 19002718 (4), 17458866 (3), 15904433 (3) (see all 15)
    lymphatic metastasis 85.5 19 19589137 (3), 16159440 (2), 16219148 (2), 19744460 (1) (see all 10)
    lymphedema primary 79.9 5 12900893 (1), 15693535 (1), 18564920 (1)
    lymphedema 76.4 26 19289394 (5), 10835628 (3), 19002718 (3), 12386934 (1) (see all 12)
    metastasis 68.1 98 16044920 (4), 19787226 (4), 19628565 (3), 16510584 (3) (see all 54)
    tumors 60.3 199 17234768 (6), 19956902 (5), 10590384 (5), 19556880 (4) (see all 94)
    lymphangioma 59.8 26 19151999 (4), 11742043 (2), 17584927 (2), 12060670 (1) (see all 7)
    hemangioendothelioma 58.7 6 10697276 (2), 19262246 (1), 15920541 (1)
    vascular neoplasms 57.5 1 10590384 (1)
    neovascularization 52.6 12 20008149 (2), 10590384 (2), 15032727 (1), 18694556 (1) (see all 8)

    GeneTests: FLT4
    Milroy Disease

    Human Genome Epidemiology (HuGE) Navigator: FLT4 (14 documents)

    Export disorders for FLT4 gene to outside databases

    (in PubMed. Associations of this gene to articles via 1Entrez Gene, 2UniProtKB/Swiss-Prot, 3HGNC, 4GAD, 5PharmGKB, 6HMDB, 7DrugBank, 8UniProtKB/TrEMBL, 9 Novoseek, and/or 10fRNAdb)
    About This Section

    PubMed articles for FLT4 gene, integrated from 9 sources (see all 536):
    (articles sorted by number of sources associating them with FLT4)
        Utopia: connect your pdf to the dynamic
    world of online information

    1. Chromosomal localization of FLT4, a novel receptor-type tyrosine kinase gene. (PubMed id 1319394)1, 2, 3, 9 Galland F....Birnbaum D. (1992)
    2. Activation of vascular endothelial growth factor receptor-3 and its downstream signaling promote cell survival under oxidative stress. (PubMed id 15102829)1, 2, 9 Wang J.F....Groopman J.E. (2004)
    3. Vascular endothelial growth factor receptor-3 and focal adhesion kinase bind and suppress apoptosis in breast cancer cells. (PubMed id 16452200)1, 2, 9 Garces C.A....Cance W.G. (2006)
    4. Ligand-induced vascular endothelial growth factor receptor-3 (VEGFR-3) heterodimerization with VEGFR-2 in primary lymphatic endothelial cells regulates tyrosine phosphorylation sites. (PubMed id 12881528)1, 2, 9 Dixelius J....Claesson-Welsh L. (2003)
    5. FLT4 receptor tyrosine kinase contains seven immunoglobulin-like loops and is expressed in multiple human tissues and cell lines. (PubMed id 1327515)1, 2, 9 Pajusola K.... Alitalo K. (1992)
    6. Heterodimerization with vascular endothelial growth factor receptor-2 (VEGFR-2) is necessary for VEGFR-3 activity. (PubMed id 15474514)1, 2, 9 Alam A....Herbert J.M. (2004)
    7. Direct recruitment of CRK and GRB2 to VEGFR-3 induces proliferation, migration, and survival of endothelial cells through the activation of ERK, AKT, and JNK pathways. (PubMed id 16076871)1, 2, 9 Salameh A....Oliviero S. (2005)
    8. Autocrine loop between vascular endothelial growth fa ctor (VEGF)-C and VEGF receptor-3 positively regulates tumor-associated lymphan giogenesis in oral squamoid cancer cells. (PubMed id 19779139)1, 2, 9 Matsuura M....Sueishi K. (2009)
    9. Missense mutations interfere with VEGFR-3 signalling in primary lymphoedema. (PubMed id 10835628)1, 2, 9 Karkkainen M.J.... Finegold D.N. (2000)
    10. FLT4, a novel class III receptor tyrosine kinase in chromosome 5q33- qter. (PubMed id 1310071)1, 2, 9 Aprelikova O.... Alitalo K. (1992)

    (in PubMed, OMIM, and NCBI Bookshelf)
    About This Section
     ANDOR
    Aliases
    Disorders
    Free Text  

      Query String
    PubMed
    OMIM
    NCBI Bookshelf
      (Note: In FireFox, select the above section and copy using Ctrl-C)

    (According to Entrez Gene, HGNC, AceView, euGenes, Ensembl, miRBase, ECgene, Kegg, and/or H-InvDB)
    About This Section
    Entrez Gene: 2324 HGNC: 3767 AceView: FLT4 Ensembl:ENSG00000037280 euGenes: HUgn2324
    ECgene: FLT4 Kegg: 2324 H-InvDB: FLT4

    (According to HUGE)
    About This Section
      --

    (According to PharmGKB, ATLAS, HORDE, IMGT, LEIDEN, UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL,
    Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot)
    About This Section
    NameDescription
    PharmGKB entry for FLT4 Pharmacogenomics, SNPs, Pathways
    ATLAS Chromosomes in Cancer entry for FLT4 Genetics and Cytogenetics in Oncology and Haematology
    GeneReviewshttp://www.ncbi.nlm.nih.gov/sites/GeneTests/lab/gene/FLT4
    Wikipedia http://en.wikipedia.org/wiki/FLT4

    (Patent information from GeneIP,
    Licensable technologies from WIS Yeda, Salk, Tufts,
    IP news from LifeMap Sciences, Inc.)
    About This Section
    Patent Information for FLT4 gene:
    Search GeneIP for patents involving FLT4

    Licensable Technologies for FLT4 gene:
    Weizmann Institute:Porphyrin and Corrole -like analogs as potent inhibitors of Growth Factor Receptor Binding and Activation
    GeneCards and IP:
    Japan Patent Office Licenses GeneCards     European Patent Office Licenses GeneCards     Improving the IP Search



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    About This Section

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