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Aliases & Descriptions for FLT1
(According to
1HGNC,
2Entrez Gene,
3UniProtKB/Swiss-Prot,
4UniProtKB/TrEMBL, 5OMIM, 6GeneLoc
, and/or 7Ensembl,
8miRBase) About This Section
|
| Aliases |
|---|
| EC 2.7.10.1 3 | | FLT 2, 3 | | FRT 3 | | Flt-1 3 | | VEGFR-1 3 | | VEGFR1 2 |
| | | Descriptions |
|---|
| Fms-like tyrosine kinase 1 3 | | Tyrosine-protein kinase FRT 3 | | Tyrosine-protein kinase receptor FLT 3 | | Vascular permeability factor receptor 3 | | fms-related tyrosine kinase 1 2 | fms-related tyrosine kinase 1 (vascular endothelial growth factor/vascular permeability factor receptor) 2 | | vascular endothelial growth factor receptor 1 2 |
|
| | Search outside databases for aliases for FLT1 genePrevious GC identifers: GC13M026854 GC13M022854 GC13M027805 GC13M026673 |
Summaries for FLT1(According to Entrez Gene,
Wikipedia's
Gene Wiki,
UniProtKB/Swiss-Prot,
and/or
UniProtKB/TrEMBL)
About This Section
| EntrezGene summary for FLT1: This gene encodes a member of the vascular endothelial growth factor receptor (VEGFR) family. VEGFR family members are receptor tyrosine kinases (RTKs) which contain an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and a tyrosine kinase (TK) domain within the cytoplasmic domain. This protein binds to VEGFR-A, VEGFR-B and placental growth factor and plays an important role in angiogenesis and vasculogenesis. Expression of this receptor is found in vascular endothelial cells, placental trophoblast cells and peripheral blood monocytes. Multiple transcript variants encoding different isoforms have been found for this gene. Isoforms include a full-length transmembrane receptor isoform and shortened, soluble isoforms. The soluble isoforms are associated with the onset of pre-eclampsia. UniProtKB/Swiss-Prot: VGFR1_HUMAN, P17948Function: Receptor for VEGF, VEGFB and PGF. Has a tyrosine-protein kinase activity. The VEGF-kinase ligand/receptor signaling system plays a key role in vascular development and regulation of vascular permeability. Isoform SFlt1 may have an inhibitory role in angiogenesisGene Wiki entry for FLT1 |
Genomic Location for FLT1
(According to
GeneLoc and/or
HGNC, and/or
Entrez Gene (NCBI build 36),
and/or miRBase,
Genomic Views according to
UCSC and
Ensembl,
Transcription factor binding sites according to
SABiosciences) About This Section
| Genomic View: UCSC Golden Path with GeneCards custom track
Transcription factor binding sites upstream to the FLT1 gene 
Entrez Gene cytogenetic band: 13q12 Ensembl cytogenetic band: 13q12.3 HGNC cytogenetic band: 13q12FLT1 Gene in genomic location: bands according to Ensembl, locations according to
(and/or Entrez Gene and/or Ensembl if different)
 GeneLoc gene densities for chromosome 13 GeneLoc Exon Structure GeneLoc location for GC13M027773:
(about GC identifiers)
Start:
|
27,774,389 bp from pter |
End:
|
27,967,265 bp from pter |
Size:
|
192,877 bases |
Orientation:
|
minus strand |
RefSeq DNA sequence:- NC_000013.9 NT_024524.13
| Proteins for FLT1
(According to
1UniProtKB,
and/or Ensembl,
Phosphorylation sites according to 2Phosphosite,
RefSeq according to NCBI,
PDB rendering according to OCA and/or Proteopedia,
Recombinant Proteins
from Invitrogen,
Millipore,
Sigma-Aldrich,
R&D Systems,
Enzo Life Sciences,
Abnova,
OriGene and/or,
Abcam,
Biochemical Assays by
Invitrogen,
Millipore,
R&D Systems,
Cell Signaling Technology, and/or
Enzo Life Sciences,
Ontologies according to Gene
Ontology Consortium 01 Apr 2009 and
Entrez Gene,
Antibodies by Invitrogen,
Millipore,
Sigma-Aldrich,
R&D Systems,
Cell Signaling Technology,
Abcam,
Abnova, and/or
Novus Biologicals)
About This Section
| UniProtKB/Swiss-Prot: VGFR1_HUMAN, P17948 (See
protein sequence)Recommended Name: Vascular endothelial growth factor receptor 1 precursor Size: 1338 amino acids; 150769 Da
Subunit: Interacts in vitro with various phosphotyrosine-binding proteins, including PLC-gammas, PTPN11, GRB2, CRK and NCK1
Subcellular location: Isoform Flt1: Cell membrane; Single-pass type I membrane protein
Subcellular location: Isoform sFlt1: Secreted
PDB structures from and Proteopedia :1FLT (3D)
 1QSV (3D)
 1QSZ (3D)
 1QTY (3D)
 1RV6 (3D)
 
Secondary accessions: O60722 P16057 Q12954Alternative splicing: 2 isoforms: P17948-1 P17948-2 (Additional isoforms seem to exist)Post-translational modifications:
View phosphorylation sites using PhosphoSite2
REFSEQ proteins (4 alternative transcripts):
NP_001153392.1 NP_001153502.1 NP_001153503.1 NP_002010.2
ENSEMBL proteins: ENSP00000282397
Human Recombinant Proteins  | Invitrogen human recombinant proteins for FLT1 |  | Millipore Purified and/or Recombinant FLT1 Protein |  | Sigma-Aldrich Proteins for FLT1  |  | R&D Systems Recombinant & Natural Proteins for FLT1 (VEGF R1/Flt-1) |  | Enzo Life Sciences proteins for FLT1 |  | Recombinant Proteins from Abcam (VEGFR 1+VEGFR 2, VEGF Receptor 1) |  | Human Recombinant Proteins from Abnova (FLT1) |               OriGene Purified Recombinant Human Protein: FLT1 
4 Gene Ontology (GO) cellular component terms (links to tree view): About this table
Antibodies for FLT1: Assays for FLT1: | Protein
Domains/ Families for FLT1(According to InterPro, ProtoNet,
UniProtKB, and/or BLOCKS,
Sets of similar genes according to GeneDecks)
About This Section
| - Graphical View of Domain Structure for InterPro Entry P17948
ProtoNet protein and cluster: P17948 5 Blocks protein families: IPB001824 Receptor tyrosine kinase IPB003598 Immunoglobulin C-2 type IPB008266 Tyrosine protein kinase IPB009134 Vascular endothelial growth factor receptor signature IPB013098 Immunoglobulin I-set
UniProtKB/Swiss-Prot: VGFR1_HUMAN, P17948Similarity: Belongs to the protein kinase superfamily. Tyr protein kinase family. CSF-1/PDGF receptor subfamilySimilarity: Contains 7 Ig-like C2-type (immunoglobulin-like) domainsSimilarity: Contains 1 protein kinase domain | Gene Function for FLT1
(According to MGI Jun 06 2009, UniProtKB,
IUBMB,and/or Genatlas,
shRNA from
OriGene,
Sigma-Aldrich, RNAi from
Sigma-Aldrich,
RNAi Products,
Clones, and
Q-PCR Products
from Invitrogen,
Millipore,
OriGene, and/or
Abnova,
siRNAs from
Applied Biosystems,
SYBR primers from OriGene,
Cell-based Assays from Millipore,
Ontologies according to Gene Ontology Consortium 01 Apr 2009 via
Entrez Gene.)
About This Section
| Inhib. RNA: |  | Invitrogen RNAi Products for gene knock-down (FLT1) | |  | Millipore RNAi Products for the Analysis of FLT1 Gene knock-down | |  | Abnova Chimera RNAi Products for Gene knock-down (FLT1) |               OriGene 29mer shRNA kit in GFP-retroviral vector: NM_002019
Applied Biosystems Silencer® siRNAs for FLT1
Sigma-Aldrich siRNA and siRNA Panels for FLT1  Sigma-Aldrich shRNA Panels and shRNA for FLT1  Explore Sigma-Aldrich super-pooled esiRNAs 
              OriGene GFP tagged cDNA clone in CMV expression vector: NM_002019                                  Myc/DDK tagged cDNA clone in CMV expression vector: NM_002019                                  untagged cDNA clones in CMV expression vector (see all 2): NM_002019 
Primers: Browse
Quantitative PCR Central at Invitrogen for Q-PCR LUX™ Primers               OriGene genome-wide validated SYBR primer pairs: NM_002019
UniProtKB/Swiss-Prot: VGFR1_HUMAN, P17948Function: Receptor for VEGF, VEGFB and PGF. Has a tyrosine-protein kinase activity. The VEGF-kinase ligand/receptor signaling system plays a key role in vascular development and regulation of vascular permeability. Isoform SFlt1 may have an inhibitory role in angiogenesisCatalytic activity: ATP + a [protein]-L-tyrosine = ADP + a [protein]-L-tyrosine phosphateEnzyme Number (IUBMB): EC 2.7.10.1 Genatlas biochemistry entry for FLT1:fms-related receptor tyrosine kinase 1,expressed on the surface on endothelial cells7 MGI mutant phenotypes (inferred from 5 alleles ) (MGI details for Flt1):
5/7 Gene Ontology (GO) molecular function terms (links to tree view) (see all 7
): About this table | Pathways & Interactions for FLT1
(Pathways according to Invitrogen
(maps by GeneGo),
Millipore,
Cell Signaling Technology,
Sigma-Aldrich,
KEGG
and/or UniProtKB,
Sets of similar genes according to GeneDecks,
Proteins Network according to
SABiosciences,
Interactions according to 1UniProtKB,
2MINT, and/or
3STRING,
with links to IntAct and
Ensembl,
Ontologies according to Gene Ontology Consortium 01 Apr 2009 via
Entrez Gene.)
About This Section
|
4 Sigma-Aldrich "Your Favorite Gene" Pathways for FLT1 (Your Favorite Gene powered by Ingenuity) 
Gene Network CentralTM Interacting Genes and Proteins Network for FLT1 
5/89 Interacting proteins for FLT1 (ENSP000002823973 P179482) via UniProtKB, MINT, and/or STRING (see all 89
)About this table
5/9 Gene Ontology (GO) biological process terms (links to tree view) (see all 9
): About this table
|
Drugs & Compounds for FLT1(Chemical Compounds according to UniProtKB, Enzo Life Sciences,
Sigma-Aldrich, Tocris Bioscience, and/or
Novoseek and Drugs according to
Enzo Life Sciences and/or
PharmGKB)
About This Section
|  |
Enzo Life Sciences drugs & compounds for FLT1 |
 | Sigma-Aldrich Small Molecules for FLT1: Inhibitor |
Compounds for FLT1 available from Tocris Bioscience 10/24 Novoseek chemical compound relationships for FLT1 gene (see all 24
)
| Compound |
Score |
Articles |
PubMed IDs for Articles with Shared Sentences (# sentences) |
| tyrosine |
83.35 |
587 |
16021077 (9), 17689655 (5), 17346536 (4), 16389038 (4) (see all 99) |
| matrigel |
68.39 |
10 |
16447633 (2), 11549592 (2), 15952180 (1), 12382678 (1) (see all 7) |
| zd6474 |
67.95 |
2 |
18694994 (2) |
| phosphatidylinositol |
31.61 |
13 |
10921887 (2), 16946136 (1), 7929439 (1), 11513746 (1) (see all 6) |
| tgf beta1 |
29.10 |
5 |
16038269 (3), 18512268 (1), 18985316 (1) |
| wogonin |
27.69 |
4 |
17024605 (2), 16979123 (2) |
| thymidine |
23.58 |
1 |
17006982 (1) |
| p002 |
17.80 |
1 |
11241411 (1) |
| nitric oxide |
17.37 |
34 |
11549592 (5), 11141500 (3), 16006432 (2), 11493335 (2) (see all 16) |
| ribonucleic acid |
15.19 |
2 |
16139132 (1), 10523040 (1) |
About this table
|
Transcripts for FLT1(GenBank/EMBL/DDBJ Accessions according to
Unigene
(Build 219 Homo sapiens; Jun 2 2009) or GenBank, RefSeq according to Entrez Gene,
DOTS (version 10), and/or
AceView,
non coding RNAs according to
RNAdb,
ESTs according to GeneTide,
exon structure from GeneLoc,
alternative splicing isoforms according to ASD and/or
ECgene,
RNAi Products from Invitrogen,
Millipore, and/or
Abnova,
siRNAs from Applied Biosystems,
Sigma-Aldrich,
shRNA from
Sigma-Aldrich,
OriGene,
Tagged/untagged cDNA clones from
OriGene, Expression Assays from Applied Biosystems) About This Section
| Inhib. RNA: |  | Invitrogen RNAi Products for gene knock-down (FLT1) | |  | Millipore RNAi Products for the Analysis of FLT1 Gene knock-down | |  | Abnova Chimera RNAi Products for Gene knock-down (FLT1) |               OriGene 29mer shRNA kit in GFP-retroviral vector: NM_002019
Sigma-Aldrich siRNA and siRNA Panels for FLT1  Sigma-Aldrich shRNA Panels and shRNA for FLT1  Explore Sigma-Aldrich super-pooled esiRNAs 
Applied Biosystems Silencer® siRNAs: NM_002019 REFSEQ mRNAs for FLT1 gene (4 alternative transcripts): NM_001159920.1 NM_001160030.1 NM_001160031.1 NM_002019.4
Applied Biosystems TaqMan ® Gene Expression Assays: NM_002019               OriGene GFP tagged cDNA clone in CMV expression vector: NM_002019                                  Myc/DDK tagged cDNA clone in CMV expression vector: NM_002019                                  untagged cDNA clones in CMV expression vector (see all 2): NM_002019  Additional cDNA sequence: AB209050.1 AF063657.2 AF339822.1 AK292936.1 AK300392.1 AK309901.1 BC029849.1 BC039007.1 BC046165.1 BC048278.1 CR593658.1 CR606445.1 CR611216.1 CR615327.1 DQ836394.1 DQ836395.1 DQ836396.1 EF491868.1 EF491869.1 EF491870.1 EU360600.1 EU368830.1 EU443152.1 EU826561.1 EU826562.1 S77814.1 U01134.1 24/26 DOTS entries (see all 26
): DT.455716 DT.100798396 DT.100798389 DT.92439892 DT.120789401 DT.95261500 DT.120789405 DT.444407 DT.100798392 DT.216770 DT.100798393 DT.120789444 DT.95311884 DT.100798394 DT.120789505 DT.202959 DT.40105847 DT.95372174 DT.99979231 DT.86995347 DT.92439882 DT.95372177 DT.97864182 DT.120789450 24/328 AceView cDNA sequences (see all 328
):T29349 BC046165 BF061952 CB268312 BM704062 AI692797 AW273133 CD515023 BF515817 BE048969 AI147618 AI800102 AF063657 CR593388 BQ015562 BX504049 BE501454 BC048278 AI088255 AI335834 BX339041 BX382094 CR593658 BX349016
highest scoring ESTs for FLT1:U01134 AF063657 AL540382 AL543703 AL548841 AL549158 AL551816 AL553307 BC039007 BX336305 Unigene Cluster for FLT1: Fms-related tyrosine kinase 1 (vascular endothelial growth factor/vascular permeability factor receptor) Hs.654360 [show with all ESTs]Unigene Representative Sequence: NM_002019
GeneLoc Exon Structure
1 Ensembl transcript including schematic representation: ENST00000282397
|
Expression for FLT1
(Experimental results according to
1GeneNote
and GNF BioGPS,
probe sets-to-genes annotations according to
2GeneAnnot ,
3GeneTide ,
Sets of similar genes according to GeneDecks,
Electronic Northern calculations according to data from
UniGene (Build 219 Homo sapiens),
SAGE tags according to
CGAP,
plus additional links to
SOURCE, and/or
GNF
BioGPS, and/or
EXPOLDB, and/or
UniProtKB,
Expression Assays from
Applied Biosystems
)
About This Section
| FLT1 expression in normal and diseased human tissues
Applied Biosystems TaqMan ® Gene Expression Assays for FLT1
1 / 2 / 3 21 probe-sets matching FLT1 gene Data from
(Publications) and GNF BioGPS About these images About these images
CGAP SAGE TAG: --
SOURCE GeneReport for Unigene cluster: Hs.654360
Expression variation in blood from EXPOLDB for FLT1 UniProtKB/Swiss-Prot: VGFR1_HUMAN, P17948Tissue specificity: Mostly in normal lung, but also in placenta, liver, kidney, heart and brain tissues. Specifically expressed in most of the vascular endothelial cells, and also expressed in peripheral blood monocytes. It is not expressed in tumor cell lines. Isoform sFlt1 is strongly expressed in placenta |
Orthologs for FLT1
(Orthologs according to
1,2HomoloGene (2older version, for species not in 1newer version),
3euGenes,
4SGD
and/or
5MGI Jun 06 2009,
with possible further links to
Flybase
and/or
WormBase,
Gene Trees according to Ensembl)
About This Section
|
Orthologs for FLT1 gene from 5/10 species (see all 10
)
About this table Species with no ortholog for FLT1
ENSEMBL Gene Tree for FLT1 | Paralogs for FLT1(Paralogs according to 1HomoloGene and 2Ensembl, Pseudogenes according to 3Pseudogene.org) About This Section
| Paralogs for FLT1 gene
- FLT42 KDR2
|
SNPs/Variants for FLT1(According to the
1NCBI SNP Database,
2Ensembl,
3PupaSUITE, and
UniProtKB,
Linkage Disequilibrium by HapMap,
Genotyping Reagents from
Applied Biosystems)
About This Section
|
HapMap Linkage Disequilibrium images for FLT1 (up to first 250kb)
|
Disorders & Mutations for FLT1
(in which this Gene is Involved, According to
OMIM, UniProtKB,
Novoseek, PharmGKB,
Genatlas, GeneTests,
Blood group antigen gene mutations by BGMUT,
HGMD, GAD,
HuGE Navigator,
BCGD,
and/or TGDB.)
About This Section
|
OMIM: 165070
10/91 Novoseek disease relationships for FLT1 gene (see all 91
)
| Disease |
Score |
Articles |
PubMed IDs for Articles with Shared Sentences (# sentences) |
| preeclampsia |
83.36 |
192 |
16021077 (8), 17327029 (6), 18631405 (5), 15993706 (4) (see all 98) |
| neovascularization |
78.51 |
26 |
12766257 (1), 17085673 (1), 19265261 (1), 9288799 (1) (see all 21) |
| tumors |
64.55 |
319 |
18794121 (5), 14597894 (5), 15699727 (4), 8644848 (4) (see all 99) |
| intrauterine growth retardation |
55.94 |
8 |
11675477 (1), 17956955 (1), 16545329 (1), 11945079 (1) (see all 8) |
| vascular proliferation |
55.29 |
2 |
10620438 (1), 10077638 (1) |
| corneal neovascularization |
53.52 |
2 |
10937562 (1), 15515760 (1) |
| solid tumor |
53.12 |
1 |
12526219 (1) |
| metastasis |
50.64 |
51 |
17230507 (3), 10620438 (3), 9415339 (2), 18451223 (2) (see all 35) |
| glioblastoma |
49.89 |
9 |
15015778 (2), 7525492 (1), 15700836 (1), 7528359 (1) (see all 7) |
| proteinuria |
49.07 |
10 |
16458660 (2), 16569734 (1), 16230516 (1), 17127249 (1) (see all 9) |
About this table
Human Gene Mutation Database: FLT1 Human Genome Epidemiology Navigator: FLT1 (9 documents) Tumor Gene Database: FLT1
|
Medical News for FLT1(Possibly Related Articles in
Doctor's Guide)
About This Section
| -- |
Publications for FLT1 (in
PubMed.
Associations of this gene to articles via
1Novoseek,
2HGNC,
3Entrez Gene,
4UniProtKB/Swiss-Prot,
5UniProtKB/TrEMBL,
6GAD, and/or
7PharmGKB)
About This Section
| 10/907 PubMed articles for FLT1 gene (see all 907
):- Nucleotide sequence and expression of a novel human receptor-type tyrosine kinase gene (flt) closely related to the fms family. (PubMed id 2158038)1, 2, 3, 4 Shibuya M....Sato M. (1990)
- The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PubMed id 15489334)3, 4 Gerhard D.S....Malek J. (2004)
- Solution structure of the VEGF-binding domain of Flt-1: comparison of its free and bound states. (PubMed id 10543948)3, 4 Starovasnik M.A.... Skelton N.J. (1999)
- Identification of vascular endothelial growth factor receptor-1 tyrosine phosphorylation sites and binding of SH2 domain-containing molecules. (PubMed id 9722576)3, 4 Ito N.... Claesson-Welsh L. (1998)
- Inhibition of vascular endothelial cell growth factor activity by an endogenously encoded soluble receptor. (PubMed id 8248162)3, 4 Kendall R.L. and Thomas K.A. (1993)
- A possible new member of tyrosine kinase family, human frt sequence, is highly conserved in vertebrates and located on human chromosome 13. (PubMed id 3040650)3, 4 Matsushime H.... Shibuya M. (1987)
- Natural selection of FLT1 alleles and their association with malaria resistance in utero. (PubMed id 18779584)1, 3 Muehlenbachs A....Duffy P.E. (2008)
- Flt-1, vascular endothelial growth factor receptor 1, is a novel cell surface marker for the lineage of monocyte-macrophages in humans. (PubMed id 11157498)1, 3 Sawano A....Shibuya M. (2001)
- Dinucleotide repeat polymorphism in Fms-like tyrosine kinase-1 (Flt-1) gene is not associated with preeclampsia. (PubMed id 18631405)1, 3 Kim S.Y....Ryu H.M. (2008)
- Expression of vascular endothelial growth factor and its receptors KDR and Flt-1 in gastric cancer cells. (PubMed id 12439912)1, 3 Zhang H....Shou C.C. (2002)
|
Search for FLT1
(in PubMed,
OMIM, and NCBI Bookshelf) About This Section
|
|
Genome Databases showing FLT1
(According to
Entrez Gene,
HGNC,
AceView,
euGenes,
Ensembl,
miRBase,
ECgene,
and/or
H-InvDB)
About This Section
|
| Other Databases showing FLT1
(According to HUGE)
About This Section
| -- |
Specialized Databases showing FLT1(According to ATLAS, HORDE, IMGT, MTDB, LEIDEN, UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL, Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot) About This Section
|
| About This Section
| Licensable Technologies for FLT1 gene:
| Services for FLT1(Reagents available from Applied Biosystems, Antibodies and assays by Cell
Signaling Technology, Abcam, Novus Biologicals, Sigma-Aldrich, R&D Systems, Millipore, Abnova, and/or Invitrogen, Clones available from OriGene,and/or Invitrogen, Drugs and/or compounds by Sigma-Aldrich, Enzo Life Sciences, and/or Tocris Bioscience) About This Section
| 
 Products for FLT1:

 | |
 | | | | |
|
 |  |  |
| Antibodies & Assays for FLT1  (VEGF Receptor 1) |
| | | | Tocris compounds for FLT1 |
|
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GeneCards Homepage - Last full update: 1 Jul 2009
Incremental update: 13 Oct 2009
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