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Aliases for FLNB-AS1 Gene

Subcategory (RNA class) for FLNB-AS1 Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for FLNB-AS1 Gene

  • FLNB Antisense RNA 1 2 3 5
  • FLNB Antisense RNA 1 (Non-Protein Coding) 2

External Ids for FLNB-AS1 Gene

Summaries for FLNB-AS1 Gene

GeneCards Summary for FLNB-AS1 Gene

FLNB-AS1 (FLNB Antisense RNA 1) is an RNA Gene, and is affiliated with the non-coding RNA class.

Additional gene information for FLNB-AS1 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for FLNB-AS1 Gene

Genomics for FLNB-AS1 Gene

Regulatory Elements for FLNB-AS1 Gene

Enhancers for FLNB-AS1 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH03H058332 1.4 ENCODE dbSUPER 53.9 -163.8 -163824 4 FOXA2 ARNT ARID4B SIN3A FEZF1 ZNF2 ZNF766 CBX5 ZNF416 ZNF207 DENND6A FLNB-AS1 FLNB KCTD6 RPP14 PDE12 LOC105377110 HTD2 FAM107A PXK
GH03H058046 2 FANTOM5 Ensembl ENCODE dbSUPER 22.3 +119.4 119432 8 PKNOX1 FOXA2 ZFP64 ARID4B SIN3A FEZF1 DMAP1 ZNF2 YY1 SLC30A9 FLNB-AS1 FLNB DENND6A PXK GC03P058010
GH03H058034 1.6 Ensembl ENCODE dbSUPER 16.5 +130.3 130252 11 HDGF PKNOX1 FOXA2 ARID4B SIN3A FEZF1 ZNF2 YY1 ZNF766 ZNF207 FLNB FLNB-AS1 GC03P058010
GH03H058056 1.6 Ensembl ENCODE dbSUPER 16.3 +110.5 110459 7 PKNOX1 FOXA2 MLX ARID4B SIN3A DMAP1 YY1 FOS SP5 ZHX2 SLMAP FLNB FLNB-AS1 GC03P058010
GH03H057957 2 FANTOM5 Ensembl ENCODE dbSUPER 12.2 +210.2 210234 4 FOXA2 MLX ARNT ARID4B SIN3A DMAP1 TCF12 GTF3C2 ZNF143 RUNX3 FLNB-AS1 DENND6A DNASE1L3 FLNB PXK PDE12 LOC105377104 GC03M057992
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around FLNB-AS1 on UCSC Golden Path with GeneCards custom track

Genomic Location for FLNB-AS1 Gene

Chromosome:
3
Start:
58,162,547 bp from pter
End:
58,170,636 bp from pter
Size:
8,090 bases
Orientation:
Minus strand

Genomic View for FLNB-AS1 Gene

Genes around FLNB-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
FLNB-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for FLNB-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for FLNB-AS1 Gene

Proteins for FLNB-AS1 Gene

Post-translational modifications for FLNB-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for FLNB-AS1 Gene

Domains & Families for FLNB-AS1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for FLNB-AS1 Gene

Function for FLNB-AS1 Gene

Phenotypes From GWAS Catalog for FLNB-AS1 Gene

Animal Model Products

CRISPR Products

Clone Products

  • Applied Biological Materials Clones for FLNB-AS1
  • Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for FLNB-AS1 Gene

Localization for FLNB-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for FLNB-AS1 Gene

Pathways & Interactions for FLNB-AS1 Gene

SuperPathways for FLNB-AS1 Gene

No Data Available

Interacting Proteins for FLNB-AS1 Gene

Gene Ontology (GO) - Biological Process for FLNB-AS1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for FLNB-AS1 Gene

Drugs & Compounds for FLNB-AS1 Gene

No Compound Related Data Available

Transcripts for FLNB-AS1 Gene

mRNA/cDNA for FLNB-AS1 Gene

(2) Ensembl transcripts including schematic representations, and UCSC links where relevant :

CRISPR Products

Clone Products

  • Applied Biological Materials Clones for FLNB-AS1
  • Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more

Alternative Splicing Database (ASD) splice patterns (SP) for FLNB-AS1 Gene

No ASD Table

Relevant External Links for FLNB-AS1 Gene

GeneLoc Exon Structure for
FLNB-AS1
ECgene alternative splicing isoforms for
FLNB-AS1

Expression for FLNB-AS1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for FLNB-AS1 Gene

genes like me logo Genes that share expression patterns with FLNB-AS1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for FLNB-AS1 Gene

Orthologs for FLNB-AS1 Gene

Evolution for FLNB-AS1 Gene

ENSEMBL:
Gene Tree for FLNB-AS1 (if available)
TreeFam:
Gene Tree for FLNB-AS1 (if available)

No data available for Orthologs for FLNB-AS1 Gene

Paralogs for FLNB-AS1 Gene

No data available for Paralogs for FLNB-AS1 Gene

Variants for FLNB-AS1 Gene

Sequence variations from dbSNP and Humsavar for FLNB-AS1 Gene

SNP ID Clin Chr 03 pos Sequence Context AA Info Type
rs80356518 Pathogenic 58,163,161(+) AAGTA(G/T)GCTGT nc-transcript-variant, reference, stop-gained
rs1131264 Likely benign 58,171,792(+) TGCGG(C/G)TCTTT nc-transcript-variant, upstream-variant-2KB, utr-variant-3-prime
rs1131312 Likely benign 58,171,979(+) GGGAC(A/G)TTGCC nc-transcript-variant, upstream-variant-2KB, utr-variant-3-prime
rs1131335 Likely benign 58,172,132(+) AGCCC(A/G)GAGCC nc-transcript-variant, upstream-variant-2KB, utr-variant-3-prime
rs11412 Likely benign 58,171,419(+) CGCTC(C/T)GGTGA nc-transcript-variant, upstream-variant-2KB, utr-variant-3-prime

Relevant External Links for FLNB-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
FLNB-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for FLNB-AS1 Gene

Disorders for FLNB-AS1 Gene

Relevant External Links for FLNB-AS1

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
FLNB-AS1

No disorders were found for FLNB-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for FLNB-AS1 Gene

Publications for FLNB-AS1 Gene

  1. Diversification of transcriptional modulation: large-scale identification and characterization of putative alternative promoters of human genes. (PMID: 16344560) Kimura K … Sugano S (Genome research 2006) 3 60
  2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg RL … Mammalian Gene Collection Program Team (Proceedings of the National Academy of Sciences of the United States of America 2002) 3 60

Products for FLNB-AS1 Gene

Sources for FLNB-AS1 Gene

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