Free for academic non-profit institutions. Other users need a Commercial license

Aliases for FLNB-AS1 Gene

Subcategory (RNA class) for FLNB-AS1 Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for FLNB-AS1 Gene

  • FLNB Antisense RNA 1 2 3 5
  • FLNB Antisense RNA 1 (Non-Protein Coding) 2

External Ids for FLNB-AS1 Gene

Summaries for FLNB-AS1 Gene

GeneCards Summary for FLNB-AS1 Gene

FLNB-AS1 (FLNB Antisense RNA 1) is an RNA Gene, and is affiliated with the non-coding RNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for FLNB-AS1 Gene

Genomics for FLNB-AS1 Gene

Regulatory Elements for FLNB-AS1 Gene

Enhancers for FLNB-AS1 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH03F058348 1.3 FANTOM5 Ensembl ENCODE 28.5 -182.7 -182665 9.4 HDGF FEZF1 ZNF2 YY1 ZNF766 CBX5 ZNF143 ZNF416 FOS ZNF263 DENND6A FLNB-AS1 RPP14 LOC105377110 PXK FLNB DNASE1L3 ABHD6 PDHB LOC105377106
GH03F058056 1.1 Ensembl ENCODE 25.9 +107.8 107815 12.6 PKNOX1 MLX ZFP64 ARID4B SIN3A FEZF1 DMAP1 ZNF2 YY1 ZNF548 FLNB-AS1 DENND6A FLNB RPP14 ARF4 GC03P058010
GH03F058160 1 ENCODE 22.3 +7.0 7019 5.5 HDGF ATF1 PKNOX1 CREB3L1 SIN3A YY1 FOS CEBPZ REST MEF2D FLNB-AS1 FLNB DNASE1L3 APPL1 DENND6A ABHD6 RPP14 GC03P058010
GH03F058046 0.9 FANTOM5 Ensembl ENCODE 22.3 +119.4 119432 9.0 HDGF PKNOX1 ZFP64 ARID4B SIN3A FEZF1 DMAP1 ZNF2 YY1 SLC30A9 FLNB-AS1 FLNB DENND6A PXK GC03P058010
GH03F058332 0.7 ENCODE 19.3 -163.8 -163824 4.6 HDGF ARID4B SIN3A FEZF1 ZNF2 CBX5 ZNF416 ZNF207 ZNF143 FOS DENND6A RPP14 FLNB-AS1 LOC105377110 ENSG00000255154 PXK ABHD6 ACOX2 ENSG00000272182 ENSG00000273493
- Elite enhancer/Elite enhancer-gene association Download Table
Download GeneHancer data dump

Enhancers around FLNB-AS1 on UCSC Golden Path with GeneCards custom track

Genomic Location for FLNB-AS1 Gene

Chromosome:
3
Start:
58,162,547 bp from pter
End:
58,170,636 bp from pter
Size:
8,090 bases
Orientation:
Minus strand

Genomic View for FLNB-AS1 Gene

Genes around FLNB-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
FLNB-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for FLNB-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for FLNB-AS1 Gene

Proteins for FLNB-AS1 Gene

Post-translational modifications for FLNB-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for FLNB-AS1 Gene

Domains & Families for FLNB-AS1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for FLNB-AS1 Gene

Function for FLNB-AS1 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for FLNB-AS1 Gene

Localization for FLNB-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for FLNB-AS1 Gene

Pathways & Interactions for FLNB-AS1 Gene

SuperPathways for FLNB-AS1 Gene

No Data Available

Interacting Proteins for FLNB-AS1 Gene

Gene Ontology (GO) - Biological Process for FLNB-AS1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for FLNB-AS1 Gene

Transcripts for FLNB-AS1 Gene

mRNA/cDNA for FLNB-AS1 Gene

(2) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for FLNB-AS1 Gene

No ASD Table

Relevant External Links for FLNB-AS1 Gene

GeneLoc Exon Structure for
FLNB-AS1
ECgene alternative splicing isoforms for
FLNB-AS1

Expression for FLNB-AS1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for FLNB-AS1 Gene

genes like me logo Genes that share expression patterns with FLNB-AS1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for FLNB-AS1 Gene

Orthologs for FLNB-AS1 Gene

Evolution for FLNB-AS1 Gene

ENSEMBL:
Gene Tree for FLNB-AS1 (if available)
TreeFam:
Gene Tree for FLNB-AS1 (if available)

No data available for Orthologs for FLNB-AS1 Gene

Paralogs for FLNB-AS1 Gene

No data available for Paralogs for FLNB-AS1 Gene

Variants for FLNB-AS1 Gene

Sequence variations from dbSNP and Humsavar for FLNB-AS1 Gene

SNP ID Clin Chr 03 pos Sequence Context AA Info Type
rs80356518 Pathogenic 58,163,161(+) AAGTA(G/T)GCTGT nc-transcript-variant, reference, stop-gained
rs483352714 Uncertain significance 58,169,627(+) GAGAC(A/C)TCATC intron-variant, nc-transcript-variant, reference, synonymous-codon
rs563382903 Uncertain significance 58,168,495(+) TTATC(C/T)GTCAC intron-variant, nc-transcript-variant, reference, synonymous-codon
rs748246153 Uncertain significance 58,168,542(+) GGAAA(C/T)ACCTG intron-variant, nc-transcript-variant, reference, missense
rs13079906 Benign 58,168,450(+) CAGTC(A/G)GAATT intron-variant, nc-transcript-variant, reference, synonymous-codon

Relevant External Links for FLNB-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
FLNB-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for FLNB-AS1 Gene

Disorders for FLNB-AS1 Gene

Relevant External Links for FLNB-AS1

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
FLNB-AS1

No disorders were found for FLNB-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for FLNB-AS1 Gene

Publications for FLNB-AS1 Gene

  1. Diversification of transcriptional modulation: large-scale identification and characterization of putative alternative promoters of human genes. (PMID: 16344560) Kimura K. … Sugano S. (Genome Res. 2006) 3 64
  2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 3 64

Products for FLNB-AS1 Gene

Sources for FLNB-AS1 Gene

Content
Loading form....