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Aliases for FLJ46906 Gene

Subcategory (RNA class) for FLJ46906 Gene

lncRNA

Quality Score for this RNA gene is

2

Aliases for FLJ46906 Gene

  • Uncharacterized LOC441172 3

External Ids for FLJ46906 Gene

Previous GeneCards Identifiers for FLJ46906 Gene

  • GC06P139055
  • GC06U901051

Summaries for FLJ46906 Gene

GeneCards Summary for FLJ46906 Gene

FLJ46906 (Uncharacterized LOC441172) is an RNA Gene, and is affiliated with the lncRNA class.

fRNAdb sequence ontologies for FLJ46906 Gene

  • ncRNA: An RNA transcript that does not encode for a protein rather the RNA molecule is the gene product.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for FLJ46906 Gene

Genomics for FLJ46906 Gene

Regulatory Elements for FLJ46906 Gene

Genomic Location for FLJ46906 Gene

Start:
138,691,668 bp from pter
End:
138,697,288 bp from pter
Size:
5,621 bases
Orientation:
Plus strand

Genomic View for FLJ46906 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for FLJ46906 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for FLJ46906 Gene

Proteins for FLJ46906 Gene

Post-translational modifications for FLJ46906 Gene

No Post-translational modifications

No data available for DME Specific Peptides for FLJ46906 Gene

Domains for FLJ46906 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for FLJ46906 Gene

Function for FLJ46906 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for FLJ46906 Gene

Localization for FLJ46906 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for FLJ46906 Gene

Pathways for FLJ46906 Gene

SuperPathways for FLJ46906 Gene

No Data Available

Interacting Proteins for FLJ46906 Gene

Gene Ontology (GO) - Biological Process for FLJ46906 Gene

None

No data available for Pathways by source for FLJ46906 Gene

Transcripts for FLJ46906 Gene

Unigene Clusters for FLJ46906 Gene

Uncharacterized LOC441172:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for FLJ46906 Gene

No ASD Table

Relevant External Links for FLJ46906 Gene

GeneLoc Exon Structure for
FLJ46906

Expression for FLJ46906 Gene

mRNA expression in normal human tissues for FLJ46906 Gene

SOURCE GeneReport for Unigene cluster for FLJ46906 Gene Hs.92290

genes like me logo Genes that share expressions with FLJ46906: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein expression and mRNA Expression by UniProt/SwissProt for FLJ46906 Gene

Orthologs for FLJ46906 Gene

Evolution for FLJ46906 Gene

ENSEMBL:
Gene Tree for FLJ46906 (if available)
TreeFam:
Gene Tree for FLJ46906 (if available)

No data available for Orthologs for FLJ46906 Gene

Paralogs for FLJ46906 Gene

No data available for Paralogs for FLJ46906 Gene

Variants for FLJ46906 Gene

Sequence variations from dbSNP and Humsavar for FLJ46906 Gene

SNP ID Clin Chr 06 pos Sequence Context AA Info Type MAF
rs1129180 -- 138,696,995(+) TGCAG(A/G)TTCCA nc-transcript-variant
rs3088031 -- 138,696,989(-) CTGCA(G/T)CAGGA nc-transcript-variant
rs3813334 -- 138,697,045(-) GTCAC(G/T)GTGCT nc-transcript-variant
rs4073520 -- 138,693,486(-) CCGCC(C/T)TCCCG intron-variant
rs4073521 -- 138,693,037(+) AGGGC(C/T)TCGCG intron-variant

Structural Variations from Database of Genomic Variants (DGV) for FLJ46906 Gene

Variant ID Type Subtype PubMed ID
esv2752090 CNV Gain 17911159

Relevant External Links for FLJ46906 Gene

HapMap Linkage Disequilibrium report
FLJ46906

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for FLJ46906 Gene

Disorders for FLJ46906 Gene

Relevant External Links for FLJ46906

Genetic Association Database (GAD)
FLJ46906
genes like me logo Genes that share disorders with FLJ46906: view

No data available for UniProtKB/Swiss-Prot for FLJ46906 Gene

Publications for FLJ46906 Gene

  1. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 3

Products for FLJ46906 Gene

  • QIAGEN qRT-PCR Assays for microRNAs that regulate FLJ46906
    • QuantiTect SYBR Green Assays in human,mouse,rat
    • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
    • QuantiFast Probe-based Assays in human,mouse,rat
    • Predesigned siRNA for gene silencing in human,mouse,rat for FLJ46906
    • Block miRNA regulation of FLJ46906 using miScript Target Protectors

    Sources for FLJ46906 Gene

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