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Aliases for FLJ44635 Gene

Aliases for FLJ44635 Gene

  • TPT1-Like Protein 3

External Ids for FLJ44635 Gene

Previous GeneCards Identifiers for FLJ44635 Gene

  • GC0XP070231
  • GC0XP071147
  • GC0XP071280
  • GC0XP071365

Summaries for FLJ44635 Gene

GeneCards Summary for FLJ44635 Gene

FLJ44635 (TPT1-Like Protein) is a Protein Coding gene.

Additional gene information for FLJ44635 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for FLJ44635 Gene

Genomics for FLJ44635 Gene

GeneHancer (GH) Regulatory Elements for FLJ44635 Gene

Promoters and enhancers for FLJ44635 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH0XI072141 Enhancer 0.6 ENCODE 550.8 -1.7 -1650 3.1 RFX1 CEBPB JUNB CEBPG BATF ATF2 IRF4 JUND POLR2A RUNX3 FLJ44635 PIN4 RTL5 FAM226B NHSL2
GH0XI072107 Enhancer 1.5 FANTOM5 Ensembl ENCODE dbSUPER 20 -36.2 -36189 1.2 KLF17 RAD21 GLIS2 ATF7 EGR2 CEBPB ZNF398 ZEB2 ZNF781 ZFP69B RTL5 FLJ44635 ZMYM3 NHSL2 HDAC8 OGT PIR32507 PIR46676
GH0XI072120 Enhancer 1.5 FANTOM5 Ensembl ENCODE dbSUPER 13.5 -20.1 -20058 7.2 FEZF1 ZNF2 RAD21 RFX5 ZNF335 GLIS2 ZNF143 ZNF654 REST ZNF398 PIN4 FLJ44635 RTL5 NHSL2 PIR46676 PIR32507
GH0XI072099 Enhancer 1.4 FANTOM5 Ensembl ENCODE dbSUPER 6.4 -41.1 -41119 6.9 CTCF PKNOX1 EBF1 ZIC2 YY1 RELA POLR2A ATF7 IKZF2 RUNX3 PIN4 RTL5 NHSL2 FLJ44635 CXCR3 OGT PIR32507 PIR46676
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around FLJ44635 on UCSC Golden Path with GeneCards custom track

Top Transcription factor binding sites by QIAGEN in the FLJ44635 gene promoter:

Genomic Locations for FLJ44635 Gene

Genomic Locations for FLJ44635 Gene
chrX:72,144,184-72,161,750
(GRCh38/hg38)
Size:
17,567 bases
Orientation:
Plus strand
chrX:71,364,034-71,381,600
(GRCh37/hg19)

Genomic View for FLJ44635 Gene

Genes around FLJ44635 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
FLJ44635 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for FLJ44635 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for FLJ44635 Gene

Proteins for FLJ44635 Gene

Post-translational modifications for FLJ44635 Gene

No Post-translational modifications

Other Protein References for FLJ44635 Gene

REFSEQ proteins:

No data available for DME Specific Peptides for FLJ44635 Gene

Domains & Families for FLJ44635 Gene

Suggested Antigen Peptide Sequences for FLJ44635 Gene

GenScript: Design optimal peptide antigens:

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains and UniProtKB/Swiss-Prot for FLJ44635 Gene

Function for FLJ44635 Gene

Gene Ontology (GO) - Molecular Function for FLJ44635 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005509 calcium ion binding IBA --
GO:0008017 microtubule binding IBA --
genes like me logo Genes that share ontologies with FLJ44635: view

Phenotypes for FLJ44635 Gene

GenomeRNAi human phenotypes for FLJ44635:
genes like me logo Genes that share phenotypes with FLJ44635: view

Animal Model Products

Inhibitory RNA Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for FLJ44635 Gene

Localization for FLJ44635 Gene

Gene Ontology (GO) - Cellular Components for FLJ44635 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005737 cytoplasm IBA --
GO:0070062 extracellular exosome HDA 23376485
genes like me logo Genes that share ontologies with FLJ44635: view

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Subcellular locations from the Human Protein Atlas (HPA) for FLJ44635 Gene

Pathways & Interactions for FLJ44635 Gene

SuperPathways for FLJ44635 Gene

No Data Available

Interacting Proteins for FLJ44635 Gene

Gene Ontology (GO) - Biological Process for FLJ44635 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0030154 cell differentiation IBA --
genes like me logo Genes that share ontologies with FLJ44635: view

No data available for Pathways by source and SIGNOR curated interactions for FLJ44635 Gene

Drugs & Compounds for FLJ44635 Gene

No Compound Related Data Available

Transcripts for FLJ44635 Gene

mRNA/cDNA for FLJ44635 Gene

(1) REFSEQ mRNAs :
(4) Additional mRNA sequences :
(2) Selected AceView cDNA sequences:

Unigene Clusters for FLJ44635 Gene

TPT1-like protein:
Representative Sequences:

Inhibitory RNA Products

Alternative Splicing Database (ASD) splice patterns (SP) for FLJ44635 Gene

No ASD Table

Relevant External Links for FLJ44635 Gene

GeneLoc Exon Structure for
FLJ44635

Expression for FLJ44635 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for FLJ44635 Gene

mRNA differential expression in normal tissues according to GTEx for FLJ44635 Gene

This gene is overexpressed in Whole Blood (x7.2), Brain - Cerebellar Hemisphere (x6.7), and Brain - Cerebellum (x5.7).

Integrated Proteomics: protein expression in normal tissues and cell lines from MaxQB and MOPED for FLJ44635 Gene



SOURCE GeneReport for Unigene cluster for FLJ44635 Gene:

Hs.660859
genes like me logo Genes that share expression patterns with FLJ44635: view

Primer Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for FLJ44635 Gene

Orthologs for FLJ44635 Gene

This gene was present in the common ancestor of human and chimp.

Orthologs for FLJ44635 Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia LOC465708 33
  • 100 (n)
Species where no ortholog for FLJ44635 was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • cow (Bos Taurus)
  • dog (Canis familiaris)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • mouse (Mus musculus)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

No data available for Evolution for FLJ44635 Gene

Paralogs for FLJ44635 Gene

No data available for Paralogs for FLJ44635 Gene

Variants for FLJ44635 Gene

Sequence variations from dbSNP and Humsavar for FLJ44635 Gene

SNP ID Clin Chr 0X pos Variation AA Info Type
rs1000210142 -- 72,148,299(+) G/A intron_variant
rs1000218666 -- 72,151,139(+) C/T intron_variant
rs1000241047 -- 72,148,090(+) G/A intron_variant
rs1000540784 -- 72,150,842(+) T/C intron_variant
rs1000717321 -- 72,151,566(+) T/C intron_variant

Structural Variations from Database of Genomic Variants (DGV) for FLJ44635 Gene

Variant ID Type Subtype PubMed ID
esv2618677 CNV deletion 19546169
esv2673588 CNV deletion 23128226
esv2740220 CNV deletion 23290073
esv3558972 CNV deletion 23714750
esv9073 CNV loss 19470904
nsv1132243 CNV deletion 24896259

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Variation tolerance and Additional Variant Information for FLJ44635 Gene

Disorders for FLJ44635 Gene

Additional Disease Information for FLJ44635

No disorders were found for FLJ44635 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for FLJ44635 Gene

Publications for FLJ44635 Gene

  1. Proteomic analysis of podocyte exosome-enriched fraction from normal human urine. (PMID: 23376485) Prunotto M … Moll S (Journal of proteomics 2013) 3 58
  2. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T … Sugano S (Nature genetics 2004) 3 58
  3. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg RL … Mammalian Gene Collection Program Team (Proceedings of the National Academy of Sciences of the United States of America 2002) 3 58

Products for FLJ44635 Gene

Sources for FLJ44635 Gene

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