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Aliases for FLJ44635 Gene

Aliases for FLJ44635 Gene

  • TPT1-Like Protein 3

External Ids for FLJ44635 Gene

Previous GeneCards Identifiers for FLJ44635 Gene

  • GC0XP070231
  • GC0XP071147
  • GC0XP071280
  • GC0XP071365

Summaries for FLJ44635 Gene

GeneCards Summary for FLJ44635 Gene

FLJ44635 (TPT1-Like Protein) is a Protein Coding gene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for FLJ44635 Gene

Genomics for FLJ44635 Gene

Regulatory Elements for FLJ44635 Gene

Genomic Location for FLJ44635 Gene

Start:
72,144,184 bp from pter
End:
72,161,750 bp from pter
Size:
17,567 bases
Orientation:
Plus strand

Genomic View for FLJ44635 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for FLJ44635 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for FLJ44635 Gene

Proteins for FLJ44635 Gene

Post-translational modifications for FLJ44635 Gene

No Post-translational modifications

Other Protein References for FLJ44635 Gene

REFSEQ proteins:

No data available for DME Specific Peptides for FLJ44635 Gene

Domains for FLJ44635 Gene

Suggested Antigen Peptide Sequences for FLJ44635 Gene

GenScript: Design optimal peptide antigens:

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains and UniProtKB/Swiss-Prot for FLJ44635 Gene

Function for FLJ44635 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for FLJ44635 Gene

Localization for FLJ44635 Gene

Gene Ontology (GO) - Cellular Components for FLJ44635 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0070062 extracellular exosome IDA 23376485
genes like me logo Genes that share ontologies with FLJ44635: view

No data available for Subcellular locations from UniProtKB/Swiss-Prot and Subcellular locations from COMPARTMENTS for FLJ44635 Gene

Pathways for FLJ44635 Gene

SuperPathways for FLJ44635 Gene

No Data Available

Interacting Proteins for FLJ44635 Gene

Gene Ontology (GO) - Biological Process for FLJ44635 Gene

None

No data available for Pathways by source for FLJ44635 Gene

Transcripts for FLJ44635 Gene

mRNA/cDNA for FLJ44635 Gene

(4) Additional mRNA sequences :
(2) Selected AceView cDNA sequences:
(1) REFSEQ mRNAs :
(2) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for FLJ44635 Gene

TPT1-like protein:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for FLJ44635 Gene

No ASD Table

Relevant External Links for FLJ44635 Gene

GeneLoc Exon Structure for
FLJ44635

Expression for FLJ44635 Gene

mRNA expression in normal human tissues for FLJ44635 Gene

mRNA differential expression in normal tissues according to GTEx for FLJ44635 Gene

This gene is overexpressed in Whole Blood (7.2), Brain - Cerebellar Hemisphere (6.7), and Brain - Cerebellum (5.7).

Integrated Proteomics: protein expression from MaxQB for FLJ44635 Gene

SOURCE GeneReport for Unigene cluster for FLJ44635 Gene Hs.660859

genes like me logo Genes that share expressions with FLJ44635: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery and mRNA Expression by UniProt/SwissProt for FLJ44635 Gene

Orthologs for FLJ44635 Gene

This gene was present in the common ancestor of human and chimp.

Orthologs for FLJ44635 Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia LOC465708 35
  • 100 (n)
  • 100 (a)
Species with no ortholog for FLJ44635:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • cow (Bos Taurus)
  • dog (Canis familiaris)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • mouse (Mus musculus)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for FLJ44635 Gene

ENSEMBL:
Gene Tree for FLJ44635 (if available)
TreeFam:
Gene Tree for FLJ44635 (if available)

Paralogs for FLJ44635 Gene

No data available for Paralogs for FLJ44635 Gene

Variants for FLJ44635 Gene

Sequence variations from dbSNP and Humsavar for FLJ44635 Gene

SNP ID Clin Chr 0X pos Sequence Context AA Info Type MAF
rs6413617 -- 72,153,708(+) TCCCA(A/G)ACCAA intron-variant
rs6418454 -- 72,148,494(+) TATTA(A/G)GGATT intron-variant
rs6418455 -- 72,154,042(+) TAGCT(C/T)GAGGT intron-variant
rs6418456 -- 72,157,132(+) CTGCC(C/T)TTATG intron-variant
rs6525580 -- 72,149,725(+) TTTCA(C/T)TGCTA intron-variant

Structural Variations from Database of Genomic Variants (DGV) for FLJ44635 Gene

Variant ID Type Subtype PubMed ID
esv2618677 CNV Deletion 19546169
esv9073 CNV Loss 19470904
esv2740220 CNV Deletion 23290073
esv2673588 CNV Deletion 23128226

Relevant External Links for FLJ44635 Gene

HapMap Linkage Disequilibrium report
FLJ44635

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for FLJ44635 Gene

Disorders for FLJ44635 Gene

No disorders were found for FLJ44635 Gene.

No data available for UniProtKB/Swiss-Prot for FLJ44635 Gene

Publications for FLJ44635 Gene

  1. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 3
  2. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 3
  3. A proteome-wide, quantitative survey of in vivo ubiquitylation sites reveals widespread regulatory roles. (PMID: 21890473) Wagner S.A. … Choudhary C. (Mol. Cell Proteomics 2011) 3
  4. Systematic and quantitative assessment of the ubiquitin-modified proteome. (PMID: 21906983) Kim W. … Gygi S.P. (Mol. Cell 2011) 3
  5. Systems-wide analysis of ubiquitylation dynamics reveals a key role for PAF15 ubiquitylation in DNA-damage bypass. (PMID: 23000965) Povlsen L.K. … Choudhary C. (Nat. Cell Biol. 2012) 3

Products for FLJ44635 Gene

Sources for FLJ44635 Gene

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