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Aliases for FLJ43879 Gene

Subcategory (RNA class) for FLJ43879 Gene

ncRNA

Quality Score for this RNA gene is

2

Aliases for FLJ43879 Gene

  • FLJ43879 Protein 3 5

External Ids for FLJ43879 Gene

Previous GeneCards Identifiers for FLJ43879 Gene

  • GC02M240053
  • GC02M239577
  • GC02M239505
  • GC02M239835

Summaries for FLJ43879 Gene

GeneCards Summary for FLJ43879 Gene

FLJ43879 (FLJ43879 Protein) is an RNA Gene, and is affiliated with the ncRNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for FLJ43879 Gene

Genomics for FLJ43879 Gene

Regulatory Elements for FLJ43879 Gene

Genomic Location for FLJ43879 Gene

Chromosome:
2
Start:
238,919,302 bp from pter
End:
238,926,269 bp from pter
Size:
6,968 bases
Orientation:
Minus strand

Genomic View for FLJ43879 Gene

Genes around FLJ43879 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
FLJ43879 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for FLJ43879 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for FLJ43879 Gene

Proteins for FLJ43879 Gene

Post-translational modifications for FLJ43879 Gene

No Post-translational modifications

No data available for DME Specific Peptides for FLJ43879 Gene

Domains & Families for FLJ43879 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for FLJ43879 Gene

Function for FLJ43879 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for FLJ43879 Gene

Localization for FLJ43879 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for FLJ43879 Gene

Pathways & Interactions for FLJ43879 Gene

SuperPathways for FLJ43879 Gene

No Data Available

Interacting Proteins for FLJ43879 Gene

Gene Ontology (GO) - Biological Process for FLJ43879 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for FLJ43879 Gene

Drugs & Compounds for FLJ43879 Gene

No Compound Related Data Available

Transcripts for FLJ43879 Gene

mRNA/cDNA for FLJ43879 Gene

(1) REFSEQ mRNAs :
(2) Additional mRNA sequences :
(2) Selected AceView cDNA sequences:
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for FLJ43879 Gene

FLJ43879 protein:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for FLJ43879 Gene

No ASD Table

Relevant External Links for FLJ43879 Gene

GeneLoc Exon Structure for
FLJ43879

Expression for FLJ43879 Gene

mRNA expression in normal human tissues for FLJ43879 Gene

mRNA differential expression in normal tissues according to GTEx for FLJ43879 Gene

This gene is overexpressed in Testis (x23.8).

SOURCE GeneReport for Unigene cluster for FLJ43879 Gene Hs.516791

genes like me logo Genes that share expression patterns with FLJ43879: view

Primer Products

In Situ Assay Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , mRNA Expression by UniProt/SwissProt and Protein tissue co-expression partners for FLJ43879 Gene

Orthologs for FLJ43879 Gene

Evolution for FLJ43879 Gene

ENSEMBL:
Gene Tree for FLJ43879 (if available)
TreeFam:
Gene Tree for FLJ43879 (if available)

No data available for Orthologs for FLJ43879 Gene

Paralogs for FLJ43879 Gene

No data available for Paralogs for FLJ43879 Gene

Variants for FLJ43879 Gene

Sequence variations from dbSNP and Humsavar for FLJ43879 Gene

SNP ID Clin Chr 02 pos Sequence Context AA Info Type
rs4485590 -- 238,919,756(+) CAGTG(A/G)GGCCT nc-transcript-variant
rs4485591 -- 238,919,788(+) AGCTT(A/G)GAGCC nc-transcript-variant
rs4508620 -- 238,919,787(+) GAGCT(C/T)GGAGC nc-transcript-variant
rs4474904 -- 238,919,569(+) ATGCA(C/G)TAAGC intron-variant
rs5017638 -- 238,920,998(+) AAAGT(G/T)GGAGG intron-variant

Structural Variations from Database of Genomic Variants (DGV) for FLJ43879 Gene

Variant ID Type Subtype PubMed ID
nsv876071 CNV Loss 21882294

Relevant External Links for FLJ43879 Gene

HapMap Linkage Disequilibrium report
FLJ43879

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for FLJ43879 Gene

Disorders for FLJ43879 Gene

Relevant External Links for FLJ43879

Genetic Association Database (GAD)
FLJ43879

No disorders were found for FLJ43879 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for FLJ43879 Gene

Publications for FLJ43879 Gene

  1. Genome-wide association and large-scale follow up identifies 16 new loci influencing lung function. (PMID: 21946350) Soler Artigas M. … Tobin M.D. (Nat. Genet. 2011) 48 67

Products for FLJ43879 Gene

Sources for FLJ43879 Gene

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