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Aliases for FLJ43879 Gene

Subcategory (RNA class) for FLJ43879 Gene

lncRNA

Quality Score for this RNA gene is

2

Aliases for FLJ43879 Gene

  • FLJ43879 Protein 3

External Ids for FLJ43879 Gene

ORGUL Members for FLJ43879 Gene

Summaries for FLJ43879 Gene

GeneCards Summary for FLJ43879 Gene

FLJ43879 (FLJ43879 Protein) is a RNA Gene, and belongs to lncRNA RNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for FLJ43879 Gene

Genomics for FLJ43879 Gene

Genomic Location for FLJ43879 Gene

Start:
238,919,302 bp from pter
End:
238,926,269 bp from pter
Size:
6,968 bases
Orientation:
Minus strand

Genomic View for FLJ43879 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for FLJ43879 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for FLJ43879 Gene

Regulatory Elements for FLJ43879 Gene

Proteins for FLJ43879 Gene

Post-translational modifications for FLJ43879 Gene

No Post-translational modifications

No data available for DME Specific Peptides for FLJ43879 Gene

Domains for FLJ43879 Gene

No data available for Gene Families , Protein Domains and UniProtKB/Swiss-Prot for FLJ43879 Gene

Function for FLJ43879 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for FLJ43879 Gene

Localization for FLJ43879 Gene

No data available for Gene Ontology (GO) - Cellular Components for FLJ43879 Gene

Pathways for FLJ43879 Gene

SuperPathways for FLJ43879 Gene

No Data Available

Interacting Proteins for FLJ43879 Gene

Gene Ontology (GO) - Biological Process for FLJ43879 Gene

None

No data available for Pathways by source for FLJ43879 Gene

Transcripts for FLJ43879 Gene

mRNA/cDNA for FLJ43879 Gene

(1) REFSEQ mRNAs :
(2) Additional mRNA sequences :
(2) Selected AceView cDNA sequences:
(2) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for FLJ43879 Gene

FLJ43879 protein:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for FLJ43879 Gene

No ASD Table

Relevant External Links for FLJ43879 Gene

GeneLoc Exon Structure for
FLJ43879

Expression for FLJ43879 Gene

mRNA expression in normal human tissues for FLJ43879 Gene

mRNA differential expression in normal tissues according to GTEx for FLJ43879 Gene

This gene is overexpressed in Testis (23.8).

SOURCE GeneReport for Unigene cluster for FLJ43879 Gene Hs.516791

genes like me logo Genes that share expressions with FLJ43879: view

Orthologs for FLJ43879 Gene

Evolution for FLJ43879 Gene

ENSEMBL:
Gene Tree for FLJ43879 (if available)
TreeFam:
Gene Tree for FLJ43879 (if available)

No data available for Orthologs for FLJ43879 Gene

Paralogs for FLJ43879 Gene

No data available for Paralogs for FLJ43879 Gene

Variants for FLJ43879 Gene

Sequence variations from dbSNP and Humsavar for FLJ43879 Gene

SNP ID Clin Chr 02 pos Sequence Context AA Info Type MAF
rs4474904 -- 238,919,569(+) ATGCA(C/G)TAAGC intron-variant
rs4485590 -- 238,919,756(+) CAGTG(A/G)GGCCT nc-transcript-variant
rs4485591 -- 238,919,788(+) AGCTT(A/G)GAGCC nc-transcript-variant
rs4508620 -- 238,919,787(+) GAGCT(C/T)GGAGC nc-transcript-variant
rs5017638 -- 238,920,998(+) AAAGT(G/T)GGAGG intron-variant

Structural Variations from Database of Genomic Variants (DGV) for FLJ43879 Gene

Variant ID Type Subtype PubMed ID
nsv876071 CNV Loss 21882294

Relevant External Links for FLJ43879 Gene

HapMap Linkage Disequilibrium report
FLJ43879

Disorders for FLJ43879 Gene

Relevant External Links for FLJ43879

Genetic Association Database (GAD)
FLJ43879
genes like me logo Genes that share disorders with FLJ43879: view

No data available for UniProtKB/Swiss-Prot for FLJ43879 Gene

Publications for FLJ43879 Gene

  1. Genome-wide association and large-scale follow up identifies 16 new loci influencing lung function. (PMID: 21946350) Soler Artigas M. … Tobin M.D. (Nat. Genet. 2011) 49

Products for FLJ43879 Gene

  • QIAGEN qRT-PCR Assays for microRNAs that regulate FLJ43879
    • QuantiTect SYBR Green Assays in human,mouse,rat
    • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
    • QuantiFast Probe-based Assays in human,mouse,rat
    • Predesigned siRNA for gene silencing in human,mouse,rat for FLJ43879
    • Block miRNA regulation of FLJ43879 using miScript Target Protectors

    Sources for FLJ43879 Gene

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