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Aliases for FLJ42969 Gene

Subcategory (RNA class) for FLJ42969 Gene

lncRNA

Quality Score for this RNA gene is

2

Aliases for FLJ42969 Gene

  • Uncharacterized LOC441374 3

External Ids for FLJ42969 Gene

ORGUL Members for FLJ42969 Gene

Previous GeneCards Identifiers for FLJ42969 Gene

  • GC08P102134
  • GC08U900741

Summaries for FLJ42969 Gene

GeneCards Summary for FLJ42969 Gene

FLJ42969 (Uncharacterized LOC441374) is an RNA Gene, and is affiliated with the lncRNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for FLJ42969 Gene

Genomics for FLJ42969 Gene

Genomic Location for FLJ42969 Gene

Start:
101,052,054 bp from pter
End:
101,076,251 bp from pter
Size:
24,198 bases
Orientation:
Plus strand

Genomic View for FLJ42969 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for FLJ42969 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for FLJ42969 Gene

No data available for Regulatory Elements for FLJ42969 Gene

Proteins for FLJ42969 Gene

Post-translational modifications for FLJ42969 Gene

No Post-translational modifications

No data available for DME Specific Peptides for FLJ42969 Gene

Domains for FLJ42969 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for FLJ42969 Gene

Function for FLJ42969 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for FLJ42969 Gene

Localization for FLJ42969 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for FLJ42969 Gene

Pathways for FLJ42969 Gene

SuperPathways for FLJ42969 Gene

No Data Available

Interacting Proteins for FLJ42969 Gene

Gene Ontology (GO) - Biological Process for FLJ42969 Gene

None

No data available for Pathways by source for FLJ42969 Gene

Transcripts for FLJ42969 Gene

mRNA/cDNA for FLJ42969 Gene

(2) Additional mRNA sequences :
(1) Selected AceView cDNA sequences:
(2) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for FLJ42969 Gene

Uncharacterized LOC441374:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for FLJ42969 Gene

No ASD Table

Relevant External Links for FLJ42969 Gene

GeneLoc Exon Structure for
FLJ42969

Expression for FLJ42969 Gene

mRNA expression in normal human tissues for FLJ42969 Gene

mRNA differential expression in normal tissues according to GTEx for FLJ42969 Gene

This gene is overexpressed in Heart - Left Ventricle (14.6), Adrenal Gland (5.1), and Heart - Atrial Appendage (4.2).

SOURCE GeneReport for Unigene cluster for FLJ42969 Gene Hs.652045

genes like me logo Genes that share expressions with FLJ42969: view

In Situ Assay Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , mRNA Expression by UniProt/SwissProt and Expression partners for FLJ42969 Gene

Orthologs for FLJ42969 Gene

Evolution for FLJ42969 Gene

ENSEMBL:
Gene Tree for FLJ42969 (if available)
TreeFam:
Gene Tree for FLJ42969 (if available)

No data available for Orthologs for FLJ42969 Gene

Paralogs for FLJ42969 Gene

No data available for Paralogs for FLJ42969 Gene

Variants for FLJ42969 Gene

Sequence variations from dbSNP and Humsavar for FLJ42969 Gene

SNP ID Clin Chr 08 pos Sequence Context AA Info Type MAF
rs17122 -- 101,051,469(-) GATGA(C/T)GGTGA upstream-variant-2KB
rs737707 -- 101,071,224(+) GATCA(A/G)TTCCA intron-variant
rs896411 -- 101,068,413(-) CAATG(A/G)CCAAG intron-variant
rs1551186 -- 101,062,595(-) agcca(A/T)accag intron-variant
rs1979154 -- 101,055,689(-) agtta(C/T)tacct intron-variant

Structural Variations from Database of Genomic Variants (DGV) for FLJ42969 Gene

Variant ID Type Subtype PubMed ID
nsv831409 CNV Loss 17160897
nsv524119 CNV Gain 19592680

Relevant External Links for FLJ42969 Gene

HapMap Linkage Disequilibrium report
FLJ42969

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for FLJ42969 Gene

Disorders for FLJ42969 Gene

No disorders were found for FLJ42969 Gene.

No data available for MalaCards , OMIM , UniProtKB/Swiss-Prot , University of Copenhagen DISEASES , Novoseek inferred disease relationships , Genatlas and External Links for FLJ42969 Gene

Publications for FLJ42969 Gene

No publications were found for FLJ42969 Gene.

Products for FLJ42969 Gene

Sources for FLJ42969 Gene

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