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Aliases for FLJ42969 Gene

Subcategory (RNA class) for FLJ42969 Gene


Quality Score for this RNA gene is


Aliases for FLJ42969 Gene

  • Uncharacterized LOC441374 3 5

External Ids for FLJ42969 Gene

Previous GeneCards Identifiers for FLJ42969 Gene

  • GC08P102134
  • GC08U900741

Summaries for FLJ42969 Gene

GeneCards Summary for FLJ42969 Gene

FLJ42969 (Uncharacterized LOC441374) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for FLJ42969 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for FLJ42969 Gene

Genomics for FLJ42969 Gene

GeneHancer (GH) Regulatory Elements for FLJ42969 Gene

Promoters and enhancers for FLJ42969 Gene
GeneHancer (GH) Identifier GH Type GH
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH08I101050 Enhancer 1.2 Ensembl ENCODE 570.5 +0.2 226 2.8 PKNOX1 SMAD1 ATF1 FOXA2 ARNT SIN3A TCF12 ZNF766 GATA2 FOS FLJ42969 PABPC1 LOC105375674
GH08I101025 Enhancer 1.6 FANTOM5 Ensembl ENCODE dbSUPER 7.9 -24.9 -24932 3.4 PKNOX1 SIN3A BRCA1 ZNF766 ZNF143 FOS DEK REST ZNF592 MAFF YWHAZ FLJ42969 ZNF706 GRHL2 PABPC1 LOC401471
GH08I100905 Enhancer 1.7 FANTOM5 Ensembl ENCODE dbSUPER 6.6 -144.3 -144303 4.1 HDGF PKNOX1 ZFP64 ARID4B SIN3A BRCA1 YY1 POLR2B GLIS2 FOS YWHAZ ANKRD46 FLJ42969 ZNF706 PABPC1 ENSG00000260368 ENSG00000275041 GC08P100637
GH08I101041 Enhancer 1 Ensembl ENCODE dbSUPER 8.7 -9.8 -9757 1.8 USF1 MAX BACH1 CEBPB SIN3A CEBPG ZIC2 ATF4 GATA3 CTBP2 FLJ42969 YWHAZ LOC401471
GH08I100471 Enhancer 1.7 FANTOM5 Ensembl ENCODE dbSUPER 4.9 -577.7 -577684 6 PKNOX1 FOXA2 SMAD1 MLX ARNT ARID4B NEUROD1 SIN3A DMAP1 IRF4 ENSG00000253666 SPAG1 ENSG00000202310 ANKRD46 FLJ42969 RNF19A GC08M100448 LOC105375670
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around FLJ42969 on UCSC Golden Path with GeneCards custom track

Genomic Locations for FLJ42969 Gene

Genomic Locations for FLJ42969 Gene
24,198 bases
Plus strand

Genomic View for FLJ42969 Gene

Genes around FLJ42969 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
FLJ42969 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for FLJ42969 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for FLJ42969 Gene

Proteins for FLJ42969 Gene

Post-translational modifications for FLJ42969 Gene

No Post-translational modifications

No data available for DME Specific Peptides for FLJ42969 Gene

Domains & Families for FLJ42969 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for FLJ42969 Gene

Function for FLJ42969 Gene

Phenotypes From GWAS Catalog for FLJ42969 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for FLJ42969 Gene

Localization for FLJ42969 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for FLJ42969 Gene

Pathways & Interactions for FLJ42969 Gene

SuperPathways for FLJ42969 Gene

No Data Available

Interacting Proteins for FLJ42969 Gene

Gene Ontology (GO) - Biological Process for FLJ42969 Gene


No data available for Pathways by source and SIGNOR curated interactions for FLJ42969 Gene

Drugs & Compounds for FLJ42969 Gene

No Compound Related Data Available

Transcripts for FLJ42969 Gene

mRNA/cDNA for FLJ42969 Gene

(2) Additional mRNA sequences :
(1) Selected AceView cDNA sequences:
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for FLJ42969 Gene

Uncharacterized LOC441374:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for FLJ42969 Gene

No ASD Table

Relevant External Links for FLJ42969 Gene

GeneLoc Exon Structure for

Expression for FLJ42969 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for FLJ42969 Gene

mRNA differential expression in normal tissues according to GTEx for FLJ42969 Gene

This gene is overexpressed in Heart - Left Ventricle (x14.6), Adrenal Gland (x5.1), and Heart - Atrial Appendage (x4.2).

SOURCE GeneReport for Unigene cluster for FLJ42969 Gene:

genes like me logo Genes that share expression patterns with FLJ42969: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for FLJ42969 Gene

Orthologs for FLJ42969 Gene

Evolution for FLJ42969 Gene

Gene Tree for FLJ42969 (if available)
Gene Tree for FLJ42969 (if available)

No data available for Orthologs for FLJ42969 Gene

Paralogs for FLJ42969 Gene

No data available for Paralogs for FLJ42969 Gene

Variants for FLJ42969 Gene

Sequence variations from dbSNP and Humsavar for FLJ42969 Gene

SNP ID Clin Chr 08 pos Variation AA Info Type
rs1000162286 -- 101,070,208(+) G/A intron_variant
rs1000225900 -- 101,054,393(+) G/T intron_variant
rs1000399341 -- 101,060,918(+) A/G intron_variant
rs1000411014 -- 101,058,227(+) C/T intron_variant
rs1000486019 -- 101,072,979(+) T/C intron_variant

Structural Variations from Database of Genomic Variants (DGV) for FLJ42969 Gene

Variant ID Type Subtype PubMed ID
nsv1161784 CNV deletion 26073780
nsv524119 CNV gain 19592680
nsv831409 CNV loss 17160897

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Variation tolerance and Additional Variant Information for FLJ42969 Gene

Disorders for FLJ42969 Gene

Additional Disease Information for FLJ42969

No disorders were found for FLJ42969 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for FLJ42969 Gene

Publications for FLJ42969 Gene

No publications were found for FLJ42969 Gene.

Products for FLJ42969 Gene

Sources for FLJ42969 Gene

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