Free for academic non-profit institutions. Other users need a Commercial license

Aliases for FLJ42393 Gene

Subcategory (RNA class) for FLJ42393 Gene

ncRNA

Quality Score for this RNA gene is

2

Aliases for FLJ42393 Gene

  • Uncharacterized LOC401105 3
  • AVPC1948 3

External Ids for FLJ42393 Gene

Previous GeneCards Identifiers for FLJ42393 Gene

  • GC03P189217
  • GC03P189379
  • GC03P187897

Summaries for FLJ42393 Gene

GeneCards Summary for FLJ42393 Gene

FLJ42393 (Uncharacterized LOC401105) is an RNA Gene, and is affiliated with the ncRNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for FLJ42393 Gene

Genomics for FLJ42393 Gene

Regulatory Elements for FLJ42393 Gene

Genomic Location for FLJ42393 Gene

Start:
188,178,543 bp from pter
End:
188,180,812 bp from pter
Size:
2,270 bases
Orientation:
Plus strand

Genomic View for FLJ42393 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for FLJ42393 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for FLJ42393 Gene

Proteins for FLJ42393 Gene

Post-translational modifications for FLJ42393 Gene

No Post-translational modifications

No data available for DME Specific Peptides for FLJ42393 Gene

Domains for FLJ42393 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for FLJ42393 Gene

Function for FLJ42393 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for FLJ42393 Gene

Localization for FLJ42393 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for FLJ42393 Gene

Pathways for FLJ42393 Gene

SuperPathways for FLJ42393 Gene

No Data Available

Interacting Proteins for FLJ42393 Gene

Gene Ontology (GO) - Biological Process for FLJ42393 Gene

None

No data available for Pathways by source for FLJ42393 Gene

Transcripts for FLJ42393 Gene

mRNA/cDNA for FLJ42393 Gene

(1) REFSEQ mRNAs :
(5) Selected AceView cDNA sequences:
(3) Additional mRNA sequences :
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for FLJ42393 Gene

Uncharacterized LOC401105:
Representative Sequences:

miRNA Products

Inhibitory RNA Products

  • Predesigned siRNA for gene silencing in human,mouse,rat for FLJ42393

Primer Products

  • OriGene qSTAR qPCR primer pairs in human,mouse,rat for FLJ42393
  • QuantiTect SYBR Green Assays in human,mouse,rat
  • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
  • QuantiFast Probe-based Assays in human,mouse,rat

Flow Cytometry Products

Alternative Splicing Database (ASD) splice patterns (SP) for FLJ42393 Gene

No ASD Table

Relevant External Links for FLJ42393 Gene

GeneLoc Exon Structure for
FLJ42393

Expression for FLJ42393 Gene

mRNA expression in normal human tissues for FLJ42393 Gene

mRNA expression in normal human tissues for FLJ42393 Gene

mRNA differential expression in normal tissues according to GTEx for FLJ42393 Gene

This gene is overexpressed in Heart - Left Ventricle (13.2) and Heart - Atrial Appendage (9.3).

SOURCE GeneReport for Unigene cluster for FLJ42393 Gene Hs.679026

genes like me logo Genes that share expressions with FLJ42393: view

In Situ Assay Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein expression and mRNA Expression by UniProt/SwissProt for FLJ42393 Gene

Orthologs for FLJ42393 Gene

Evolution for FLJ42393 Gene

ENSEMBL:
Gene Tree for FLJ42393 (if available)
TreeFam:
Gene Tree for FLJ42393 (if available)

No data available for Orthologs for FLJ42393 Gene

Paralogs for FLJ42393 Gene

No data available for Paralogs for FLJ42393 Gene

Variants for FLJ42393 Gene

Structural Variations from Database of Genomic Variants (DGV) for FLJ42393 Gene

Variant ID Type Subtype PubMed ID
esv2751987 CNV Gain 17911159
esv34193 CNV Loss 18971310

Relevant External Links for FLJ42393 Gene

HapMap Linkage Disequilibrium report
FLJ42393

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Sequence variations from dbSNP and Humsavar for FLJ42393 Gene

Disorders for FLJ42393 Gene

No disorders were found for FLJ42393 Gene.

No data available for UniProtKB/Swiss-Prot for FLJ42393 Gene

Publications for FLJ42393 Gene

  1. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 3
  2. The secreted protein discovery initiative (SPDI), a large-scale effort to identify novel human secreted and transmembrane proteins: a bioinformatics assessment. (PMID: 12975309) Clark H.F. … Gray A.M. (Genome Res. 2003) 3

Products for FLJ42393 Gene

  • QIAGEN qRT-PCR Assays for microRNAs that regulate FLJ42393
    • QuantiTect SYBR Green Assays in human,mouse,rat
    • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
    • QuantiFast Probe-based Assays in human,mouse,rat
    • Predesigned siRNA for gene silencing in human,mouse,rat for FLJ42393
    • Block miRNA regulation of FLJ42393 using miScript Target Protectors

    Sources for FLJ42393 Gene

    Back to Top

    Content