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Aliases for FLJ42351 Gene

Subcategory (RNA class) for FLJ42351 Gene

lncRNA

Quality Score for this RNA gene is

2

Aliases for FLJ42351 Gene

  • Uncharacterized LOC400999 3

External Ids for FLJ42351 Gene

Summaries for FLJ42351 Gene

GeneCards Summary for FLJ42351 Gene

FLJ42351 (Uncharacterized LOC400999) is a RNA Gene, and belongs to lncRNA RNA class.

fRNAdb sequence ontologies for FLJ42351 Gene

  • ncRNA: An RNA transcript that does not encode for a protein rather the RNA molecule is the gene product.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for FLJ42351 Gene

Genomics for FLJ42351 Gene

Genomic Location for FLJ42351 Gene

Start:
112,641,830 bp from pter
End:
112,645,690 bp from pter
Size:
3,861 bases
Orientation:
Minus strand

Genomic View for FLJ42351 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for FLJ42351 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for FLJ42351 Gene

No data available for Regulatory Elements for FLJ42351 Gene

Proteins for FLJ42351 Gene

Post-translational modifications for FLJ42351 Gene

No Post-translational modifications

No data available for DME Specific Peptides for FLJ42351 Gene

Domains for FLJ42351 Gene

No data available for Gene Families , Protein Domains and UniProtKB/Swiss-Prot for FLJ42351 Gene

Function for FLJ42351 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for FLJ42351 Gene

Localization for FLJ42351 Gene

No data available for Gene Ontology (GO) - Cellular Components for FLJ42351 Gene

Pathways for FLJ42351 Gene

SuperPathways for FLJ42351 Gene

No Data Available

Interacting Proteins for FLJ42351 Gene

Gene Ontology (GO) - Biological Process for FLJ42351 Gene

None

No data available for Pathways by source for FLJ42351 Gene

Transcripts for FLJ42351 Gene

mRNA/cDNA for FLJ42351 Gene

(3) Additional mRNA sequences :
(23) Selected AceView cDNA sequences:
(2) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for FLJ42351 Gene

Uncharacterized LOC400999:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for FLJ42351 Gene

No ASD Table

Relevant External Links for FLJ42351 Gene

GeneLoc Exon Structure for
FLJ42351

Expression for FLJ42351 Gene

mRNA expression in normal human tissues for FLJ42351 Gene

SOURCE GeneReport for Unigene cluster for FLJ42351 Gene Hs.585221

genes like me logo Genes that share expressions with FLJ42351: view

Orthologs for FLJ42351 Gene

Evolution for FLJ42351 Gene

ENSEMBL:
Gene Tree for FLJ42351 (if available)
TreeFam:
Gene Tree for FLJ42351 (if available)

No data available for Orthologs for FLJ42351 Gene

Paralogs for FLJ42351 Gene

No data available for Paralogs for FLJ42351 Gene

Variants for FLJ42351 Gene

Sequence variations from dbSNP and Humsavar for FLJ42351 Gene

SNP ID Clin Chr 02 pos Sequence Context AA Info Type MAF
rs1568113 -- 112,641,567(+) CCACC(C/T)GGATC downstream-variant-500B
rs2712015 -- 112,642,461(-) gtggt(C/G)catgg intron-variant
rs2712016 -- 112,642,460(-) tggtg(C/G)atggc intron-variant
rs4849087 -- 112,641,783(+) TTCTT(A/C/G)AGAAA downstream-variant-500B
rs4849088 -- 112,641,916(+) AATCT(C/T)GAAGA nc-transcript-variant

Structural Variations from Database of Genomic Variants (DGV) for FLJ42351 Gene

Variant ID Type Subtype PubMed ID
nsv458997 CNV Gain 19166990
nsv470480 CNV Gain 18288195

Relevant External Links for FLJ42351 Gene

HapMap Linkage Disequilibrium report
FLJ42351

Disorders for FLJ42351 Gene

No disorders were found for FLJ42351 Gene.

No data available for UniProtKB/Swiss-Prot for FLJ42351 Gene

Publications for FLJ42351 Gene

  1. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 3

Products for FLJ42351 Gene

  • QIAGEN qRT-PCR Assays for microRNAs that regulate FLJ42351
    • QuantiTect SYBR Green Assays in human,mouse,rat
    • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
    • QuantiFast Probe-based Assays in human,mouse,rat
    • Predesigned siRNA for gene silencing in human,mouse,rat for FLJ42351
    • Block miRNA regulation of FLJ42351 using miScript Target Protectors

    Sources for FLJ42351 Gene

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