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Aliases for FLJ42351 Gene

Subcategory (RNA class) for FLJ42351 Gene

ncRNA

Quality Score for this RNA gene is

2

Aliases for FLJ42351 Gene

  • Uncharacterized LOC400999 3

External Ids for FLJ42351 Gene

Previous GeneCards Identifiers for FLJ42351 Gene

  • GC02M113116
  • GC02U900967
  • GC02M113401

Summaries for FLJ42351 Gene

GeneCards Summary for FLJ42351 Gene

FLJ42351 (Uncharacterized LOC400999) is an RNA Gene, and is affiliated with the ncRNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for FLJ42351 Gene

Genomics for FLJ42351 Gene

Genomic Location for FLJ42351 Gene

Chromosome:
2
Start:
112,641,830 bp from pter
End:
112,645,690 bp from pter
Size:
3,861 bases
Orientation:
Minus strand

Genomic View for FLJ42351 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
GeneLoc Logo Gene Density

RefSeq DNA sequence for FLJ42351 Gene

No data available for Regulatory Elements for FLJ42351 Gene

Proteins for FLJ42351 Gene

Post-translational modifications for FLJ42351 Gene

No Post-translational modifications

No data available for DME Specific Peptides for FLJ42351 Gene

Domains & Families for FLJ42351 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for FLJ42351 Gene

Function for FLJ42351 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for FLJ42351 Gene

Localization for FLJ42351 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for FLJ42351 Gene

Pathways & Interactions for FLJ42351 Gene

SuperPathways for FLJ42351 Gene

No Data Available

Interacting Proteins for FLJ42351 Gene

Gene Ontology (GO) - Biological Process for FLJ42351 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for FLJ42351 Gene

Drugs & Compounds for FLJ42351 Gene

No Compound Related Data Available

Transcripts for FLJ42351 Gene

mRNA/cDNA for FLJ42351 Gene

(3) Additional mRNA sequences :
(23) Selected AceView cDNA sequences:
(2) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for FLJ42351 Gene

Uncharacterized LOC400999:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for FLJ42351 Gene

No ASD Table

Relevant External Links for FLJ42351 Gene

GeneLoc Exon Structure for
FLJ42351

Expression for FLJ42351 Gene

mRNA expression in normal human tissues for FLJ42351 Gene

SOURCE GeneReport for Unigene cluster for FLJ42351 Gene Hs.585221

genes like me logo Genes that share expression patterns with FLJ42351: view

Primer Products

  • QuantiTect SYBR Green Assays in human,mouse,rat
  • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
  • QuantiFast Probe-based Assays in human,mouse,rat

In Situ Assay Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , mRNA Expression by UniProt/SwissProt and Protein tissue co-expression partners for FLJ42351 Gene

Orthologs for FLJ42351 Gene

Evolution for FLJ42351 Gene

ENSEMBL:
Gene Tree for FLJ42351 (if available)
TreeFam:
Gene Tree for FLJ42351 (if available)

No data available for Orthologs for FLJ42351 Gene

Paralogs for FLJ42351 Gene

No data available for Paralogs for FLJ42351 Gene

Variants for FLJ42351 Gene

Sequence variations from dbSNP and Humsavar for FLJ42351 Gene

SNP ID Clin Chr 02 pos Sequence Context AA Info Type MAF
rs747200382 -- 112,642,703(+) CCTAC(C/G)TTCTC intron-variant
rs745970262 -- 112,643,043(+) GACAT(A/G)TCCCC intron-variant
rs745596300 -- 112,643,214(+) CCAGG(A/C)CAGTG nc-transcript-variant
rs577601472 -- 112,642,875(+) AGTGA(C/T)CTCAA intron-variant
rs574399718 -- 112,642,309(+) CAGAT(-/ATC)ATTAT intron-variant

Structural Variations from Database of Genomic Variants (DGV) for FLJ42351 Gene

Variant ID Type Subtype PubMed ID
nsv458997 CNV Gain 19166990
nsv470480 CNV Gain 18288195

Relevant External Links for FLJ42351 Gene

HapMap Linkage Disequilibrium report
FLJ42351

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for FLJ42351 Gene

Disorders for FLJ42351 Gene

genes like me logo Genes that share disorders with FLJ42351: view

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for FLJ42351 Gene

Publications for FLJ42351 Gene

  1. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 67

Products for FLJ42351 Gene

Sources for FLJ42351 Gene

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