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Aliases for FLJ41941 Gene

Subcategory (RNA class) for FLJ41941 Gene

lncRNA

Quality Score for this RNA gene is

2

Aliases for FLJ41941 Gene

  • Uncharacterized LOC100192420 3

External Ids for FLJ41941 Gene

ORGUL Members for FLJ41941 Gene

Previous GeneCards Identifiers for FLJ41941 Gene

  • GC00U923038
  • GC22P018514

Summaries for FLJ41941 Gene

GeneCards Summary for FLJ41941 Gene

FLJ41941 (Uncharacterized LOC100192420) is an RNA Gene, and is affiliated with the lncRNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for FLJ41941 Gene

Genomics for FLJ41941 Gene

Regulatory Elements for FLJ41941 Gene

Genomic Location for FLJ41941 Gene

Start:
18,029,385 bp from pter
End:
18,037,968 bp from pter
Size:
8,584 bases
Orientation:
Plus strand

Genomic View for FLJ41941 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for FLJ41941 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for FLJ41941 Gene

Proteins for FLJ41941 Gene

Post-translational modifications for FLJ41941 Gene

No Post-translational modifications

No data available for DME Specific Peptides for FLJ41941 Gene

Domains for FLJ41941 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for FLJ41941 Gene

Function for FLJ41941 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for FLJ41941 Gene

Localization for FLJ41941 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for FLJ41941 Gene

Pathways for FLJ41941 Gene

SuperPathways for FLJ41941 Gene

No Data Available

Interacting Proteins for FLJ41941 Gene

Gene Ontology (GO) - Biological Process for FLJ41941 Gene

None

No data available for Pathways by source for FLJ41941 Gene

Transcripts for FLJ41941 Gene

mRNA/cDNA for FLJ41941 Gene

(2) Additional mRNA sequences :
(2) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for FLJ41941 Gene

Uncharacterized LOC100192420:
Representative Sequences:

miRNA Products

Inhibitory RNA Products

  • Predesigned siRNA for gene silencing in human,mouse,rat for FLJ41941

Primer Products

  • QuantiTect SYBR Green Assays in human,mouse,rat
  • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
  • QuantiFast Probe-based Assays in human,mouse,rat

Flow Cytometry Products

Alternative Splicing Database (ASD) splice patterns (SP) for FLJ41941 Gene

No ASD Table

Relevant External Links for FLJ41941 Gene

GeneLoc Exon Structure for
FLJ41941

Expression for FLJ41941 Gene

mRNA expression in normal human tissues for FLJ41941 Gene

mRNA differential expression in normal tissues according to GTEx for FLJ41941 Gene

This gene is overexpressed in Muscle - Skeletal (35.1).

SOURCE GeneReport for Unigene cluster for FLJ41941 Gene Hs.589947

genes like me logo Genes that share expressions with FLJ41941: view

In Situ Assay Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein expression and mRNA Expression by UniProt/SwissProt for FLJ41941 Gene

Orthologs for FLJ41941 Gene

Evolution for FLJ41941 Gene

ENSEMBL:
Gene Tree for FLJ41941 (if available)
TreeFam:
Gene Tree for FLJ41941 (if available)

No data available for Orthologs for FLJ41941 Gene

Paralogs for FLJ41941 Gene

No data available for Paralogs for FLJ41941 Gene

Variants for FLJ41941 Gene

Sequence variations from dbSNP and Humsavar for FLJ41941 Gene

SNP ID Clin Chr 22 pos Sequence Context AA Info Type MAF
rs107321 -- 18,029,516(+) gatta(C/T)tgact nc-transcript-variant
rs366702 -- 18,032,132(+) TAGAA(C/T)TACCA intron-variant
rs378204 -- 18,031,762(+) TCCTC(C/T)TTCCA intron-variant
rs390005 -- 18,034,231(+) GAACA(C/T)AAACT intron-variant
rs390990 -- 18,034,546(+) TTCTG(C/T)GCAGG intron-variant

Structural Variations from Database of Genomic Variants (DGV) for FLJ41941 Gene

Variant ID Type Subtype PubMed ID
nsv428385 CNV Gain+Loss 18775914
nsv834121 CNV Gain 17160897
nsv914159 CNV Gain 21882294
nsv914160 CNV Loss 21882294

Relevant External Links for FLJ41941 Gene

HapMap Linkage Disequilibrium report
FLJ41941

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for FLJ41941 Gene

Disorders for FLJ41941 Gene

Relevant External Links for FLJ41941

Genetic Association Database (GAD)
FLJ41941
genes like me logo Genes that share disorders with FLJ41941: view

No data available for UniProtKB/Swiss-Prot for FLJ41941 Gene

Publications for FLJ41941 Gene

  1. Genome-wide genotyping in Parkinson's disease and neurologically normal controls: first stage analysis and public release of data. (PMID: 17052657) Fung H.C. … Singleton A. (Lancet Neurol 2006) 48

Products for FLJ41941 Gene

  • QIAGEN qRT-PCR Assays for microRNAs that regulate FLJ41941
    • QuantiTect SYBR Green Assays in human,mouse,rat
    • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
    • QuantiFast Probe-based Assays in human,mouse,rat
    • Predesigned siRNA for gene silencing in human,mouse,rat for FLJ41941
    • Block miRNA regulation of FLJ41941 using miScript Target Protectors

    Sources for FLJ41941 Gene

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