Set Analyses:
Advanced Search

Advanced Search

 
Search By
Section (entire)
for


 



FLJ41733 Gene

RNA gene   GIFtS: 16
GCID: GC21P044784

FLJ41733 Protein


  Try our

disease database 

(According to 1HGNC, 2Entrez Gene,
3UniProtKB/Swiss-Prot, 4UniProtKB/TrEMBL, 5OMIM, 6GeneLoc, 7Ensembl, 8DME, 9miRBase, 10fRNAdb, 12H-InvDB, 13NCBI, 14NONCODE, and/or 15RNAdb)
About This Section

TryGeneCards Plus

Subcategory (RNA class): lncRNA

Quality score for this RNA gene is 2

Aliases
FLJ41733 Protein2

External Ids:    Entrez Gene: 4008702   Ensembl: ENSG000002256377   
ORGUL members:         

Export aliases for FLJ41733 gene to outside databases

Previous GC identifers: GC21P043639 GC21P043607


(According to Entrez Gene, GeneCards, Tocris Bioscience, Wikipedia's Gene Wiki, PharmGKB,
UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL)
About This Section

TryGeneCards Plus

GeneCards Summary for FLJ41733 Gene:
FLJ41733 is an RNA gene, and is affiliated with the lncRNA class.


(According to GeneLoc and/or HGNC, and/or
Entrez Gene (NCBI build 37),
and/or miRBase,
Genomic Views according to UCSC (hg19) and Ensembl (release 75), Regulatory elements and Epigenetics data according to QIAGEN, and/or SwitchGear Genomics)
About This Section

TryGeneCards Plus
RefSeq DNA sequence at NCBI GenBank:
NC_000021.8  NT_011512.12  NC_018932.2  
Regulatory elements:
   Regulatory transcription factor binding sites in the FLJ41733 gene promoter:
         Pbx1a   HSF1 (long)   Pax-2   Nkx2-5   Pax-2a   CREB   deltaCREB   HSF1short   LHX3a/Lhx3a   
         Other transcription factors

Browse SwitchGear Promoter luciferase reporter plasmids
   Search Chromatin IP Primers for FLJ41733

Epigenetics:
DNA Methylation CpG Assay Predesigned for Pyrosequencing in human, mouse, rat FLJ41733


Genomic Location:
Genomic View: UCSC Golden Path with GeneCards custom track

Entrez Gene cytogenetic band: 21q22.3   Ensembl cytogenetic band:  21q22.3   

FLJ41733 Gene in genomic location: bands according to Ensembl, locations according to (and/or Entrez Gene and/or Ensembl if different)
FLJ41733 gene location

GeneLoc information about chromosome 21         GeneLoc Exon Structure

GeneLoc location for GC21P044784:  view genomic region     (about GC identifiers)

Start:
44,783,212 bp from pter      End:
44,786,446 bp from pter
Size:
3,235 bases      Orientation:
plus strand

(According to 1UniProtKB, HORDE, 2neXtProt, Ensembl, and/or Reactome, Modification sites according to PhosphoSitePlus, Specific Peptides from DME, RefSeq according to NCBI, PDB rendering according to OCA and/or Proteopedia, Recombinant Proteins from EMD Millipore, R&D Systems, GenScript, Enzo Life Sciences, OriGene, Novus Biologicals, Sino Biological, ProSpec, Cloud-Clone Corp., and/or eBioscience,
Biochemical Assays by EMD Millipore, R&D Systems, OriGene, GenScript, Cell Signaling Technology, Enzo Life Sciences, Cloud-Clone Corp., and/or eBioscience, Antibodies by EMD Millipore, R&D Systems, Cell Signaling Technology, OriGene, Novus Biologicals, Thermo Fisher Scientific, LSBio, Abcam, Cloud-Clone Corp, and/or others.)
About This Section

TryGeneCards Plus

UniProtKB: --


(According to HGNC, IUPHAR, InterPro, ProtoNet, UniProtKB, and/or BLOCKS, Sets of similar genes according to GeneDecks)
About This Section

TryGeneCards Plus
  --

(According to 1UniProtKB, Genatlas, LifeMap Discovery™, IUBMB, and/or 2DME, Human phenotypes from GenomeRNAi, Animal models from MGI Mar 06 2013, inGenious Targeting Laboratory, genOway,
transcription factor targeting from QIAGEN and/or HOMER, miRNA Gene Targets from miRTarBase, shRNA from OriGene, siRNAs from OriGene, QIAGEN, microRNA from QIAGEN, SwitchGear Genomics, Gene Editing from DNA2.0, Clones from OriGene, GenScript, Sino Biological, DNA2.0, Vector BioLabs and/or Addgene, Cell Lines from GenScript, ESI BIO, In Situ Hybridization Assays from Advanced Cell Diagnostics, Flow cytometry from eBioscience, Ontologies according to Gene Ontology Consortium 01 Apr 2014 via Entrez Gene.)
About This Section

TryGeneCards Plus

Animal Models:
   inGenious Targeting Laboratory: Let us create your new Knockout/Knockin mouse model for FLJ41733
   inGenious Targeting Laboratory: Contact us about creating complex and humanized mouse models for FLJ41733

   genOway customized KO model: permanent, tissue-specific or time-controlled inactivation for FLJ41733
   genOway customized Knockin model: humanization, point mutation, expression monitoring, etc. for FLJ41733

miRNA
Products:
    
Block miRNA regulation of human, mouse, rat FLJ41733 using miScript Target Protectors
Search for qRT-PCR Assays for microRNAs that regulate FLJ41733
Browse SwitchGear 3'UTR luciferase reporter plasmids
Inhib. RNA
Products:
    
OriGene RNAi products in human, mouse, rat for FLJ41733
Predesigned siRNA for gene silencing in human, mouse, rat FLJ41733

Gene Editing
Products:
DNA2.0 Custom Protein Engineering Service for FLJ41733

Clone
Products:
     
Browse OriGene untagged/tagged cDNA clones in CMV expression vector
OriGene custom cloning services - gene synthesis, subcloning, mutagenesis, variant library, vector shuttling
GenScript Custom all cDNA clones Services for FLJ41733
Browse Sino Biological Human cDNA Clones
DNA2.0 Custom Codon Optimized Gene Synthesis Service for FLJ41733
Search Vector BioLabs for ready-to-use adenovirus/AAV for human, mouse, rat FLJ41733

Cell Line
Products:
     
GenScript Custom overexpressing Cell Line Services for FLJ41733
Browse ESI BIO Cell Lines and PureStem Progenitors for FLJ41733 
In Situ Assay
Products:
   

 
Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for FLJ41733


(According to UniProtKB, COMPARTMENTS Subcellular localization database, Ontologies according to Gene Ontology Consortium 01 Apr 2014 via Entrez Gene.)
About This Section

TryGeneCards Plus
  --

(SuperPaths according to PathCards, Pathways according to R&D Systems, Cell Signaling Technology, KEGG, PharmGKB, BioSystems, Sino Biological, Reactome, Tocris Bioscience, GeneGo (Thomson Reuters), QIAGEN, and/or UniProtKB, Sets of similar genes according to GeneDecks, Interaction Networks according to QIAGEN, and/or STRING, Interactions according to 1UniProtKB, 2MINT, 3I2D, and/or 4STRING, with links to IntAct and Ensembl, Ontologies according to Gene Ontology Consortium 01 Apr 2014 via Entrez Gene).
About This Section

TryGeneCards Plus



    Custom Pathway & Disease-focused RT2 Profiler PCR Arrays for FLJ41733
Interactions:

    Search GeneGlobe Interaction Network for FLJ41733

(Chemical Compounds according to UniProtKB, Enzo Life Sciences, EMD Millipore, Tocris Bioscience, ApexBio, HMDB, BitterDB, and/or Novoseek, Ligands according to IUPHAR, and Drugs according to DrugBank, Enzo Life Sciences, and/or PharmGKB)
About This Section

TryGeneCards Plus
Browse Small Molecules at EMD Millipore
   Browse drugs & compounds from Enzo Life Sciences
  Browse compounds at ApexBio 

Browse Tocris compounds for FLJ41733



(Secondary structures according to fRNAdb,
GenBank/EMBL/DDBJ Accessions according to
Unigene (Build 236 Homo sapiens; Apr 25 2013) or GenBank,
RefSeq according to Entrez Gene,
DOTS (version 10), and/or AceView, transcript ids from Ensembl with links to UCSC,
exon structure from GeneLoc, alternative splicing isoforms according to ASD and/or ECgene,
siRNAs from OriGene, QIAGEN, shRNA from OriGene, microRNA from QIAGEN, SwitchGear Genomics,
Tagged/untagged cDNA clones from OriGene, GenScript, DNA2.0, Vector BioLabs, and/or Addgene, Primers from OriGene, and/or QIAGEN, Flow cytometry from eBioscience )
About This Section

TryGeneCards Plus

REFSEQ mRNAs for FLJ41733 gene: 
NM_207473.1  

Unigene Cluster for FLJ41733:

FLJ41733 protein
Hs.517320  [show with all ESTs]
Unigene Representative Sequence: XR_172351
1 Ensembl transcript including schematic representation, and UCSC links where relevant:
ENST00000435702(lincRNA)
miRNA
Products:
     
Block miRNA regulation of human, mouse, rat FLJ41733 using miScript Target Protectors
Search for qRT-PCR Assays for microRNAs that regulate FLJ41733
Browse SwitchGear 3'UTR luciferase reporter plasmids
Inhib. RNA
Products:
     
OriGene RNAi products in human, mouse, rat for FLJ41733
Predesigned siRNA for gene silencing in human, mouse, rat FLJ41733
Clone
Products:
     
Browse OriGene untagged/tagged cDNA clones in CMV expression vector
OriGene custom cloning services - gene synthesis, subcloning, mutagenesis, variant library, vector shuttling
GenScript Custom all cDNA clones Services for FLJ41733
DNA2.0 Custom Codon Optimized Gene Synthesis Service for FLJ41733
Search Vector BioLabs for ready-to-use adenovirus/AAV for human, mouse, rat FLJ41733
Primer
Products:
    
OriGene qSTAR qPCR primer pairs in human, mouse for FLJ41733
Pre-validated RT2 qPCR Primer Assay in human, mouse / rat FLJ41733
  QuantiTect SYBR Green Assays in human, mouse, rat FLJ41733
  QuantiFast Probe-based Assays in human, mouse, rat FLJ41733

Additional mRNA sequence: 

AK123727.1 XR_172351.1 

1 DOTS entry:

DT.101969092 

2 AceView cDNA sequences:

NM_207473 AK123727 

GeneLoc Exon Structure


(RNA expression data according to H-InvDB, NONCODE, miRBase, and RNAdb, Expression images according to data from BioGPS, Illumina Human BodyMap, and CGAP SAGE, Sets of similar genes according to GeneDecks, in vivo and in vitro expression data from LifeMap Discovery™, Protein expression images according to data from SPIRE 1MOPED, 2PaxDb, and 3MaxQB, plus additional links to SOURCE, and/or BioGPS, and/or UniProtKB,
PCR Arrays from QIAGEN, Primers from OriGene, and/or QIAGEN, In Situ Hybridization Assays from Advanced Cell Diagnostics)
About This Section

TryGeneCards Plus

Expression evidence for FLJ41733:none

FLJ41733 expression in normal human tissues (normalized intensities)
See probesets specificity/sensitivity at GeneAnnot
About this imageBioGPS <intensity>2/3
CGAP TAG: AGCCCAGGGT
FLJ41733 Expression
About this image

FLJ41733 Protein expression data from MOPED1, PaxDb2 and MaxQB3 --

SOURCE GeneReport for Unigene cluster: Hs.517320
    Custom PCR Arrays for FLJ41733
Primer
Products:
OriGene qSTAR qPCR primer pairs in human, mouse for FLJ41733
Pre-validated RT2 qPCR Primer Assay in human, mouse / rat FLJ41733
QuantiTect SYBR Green Assays in human, mouse, rat FLJ41733
QuantiFast Probe-based Assays in human, mouse, rat FLJ41733
In Situ
Assay Products:
 

 
Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for FLJ41733

(Orthologs according to 1,2HomoloGene (2older version, for species not in 1newer version), 3euGenes, 4SGD , 5MGI Mar 06 2013, with possible further links to Flybase and/or WormBase, and/or 6Ensembl pan taxonomic compara , Gene Trees according to Ensembl and TreeFam)
About This Section

TryGeneCards Plus
  --

ENSEMBL Gene Tree for FLJ41733 (if available)
TreeFam Gene Tree for FLJ41733 (if available)

(Paralogs according to 1HomoloGene,
2Ensembl, and 3SIMAP, Pseudogenes according to 4Pseudogene.org Build 68)
About This Section

TryGeneCards Plus
  --

(SNPs/Variants according to the 1NCBI SNP Database, 2Ensembl, 3PupaSUITE, 4UniProtKB, and DNA2.0, Linkage Disequilibrium by HapMap, Structural Variations(CNVs/InDels/Inversions) from the Database of Genomic Variants, Mutations from the Human Gene Mutation Database (HGMD), the Human Cytochrome P450 Allele Nomenclature Database, and the Locus Specific Mutation Databases (LSDB), Blood group antigen gene mutations by BGMUT, Resequencing Primers, Cancer Mutation PCR Arrays and Assays, and Copy Number PCR Arrays from QIAGEN)
About This Section

TryGeneCards Plus

Selected SNPs for FLJ41733 (see all 160)    About this table                                 

Genomic DataTranscription Related DataAllele Frequencies
SNP IDValidClinical
significance
Chr 21 posSequence#AA
Chg
TypeMore#Allele
freq
PopTotal
sample
More
----------
rs9358001,2
C,F,A,H--35281409(-) AAGCAC/GAAGCC 1 -- us2k14Minor allele frequency- G:0.13CSA WA NA 241
rs23293721,2
C,F--35281412(+) TTGTGC/TTTCCC 1 -- us2k13Minor allele frequency- T:0.12CSA WA NA 239
rs9357991,2
C,F,A,H--35281416(-) GAGTGG/AGAAGC 1 -- us2k14Minor allele frequency- A:0.13NA CSA WA 243
rs1413794441,2
--35281441(+) ACCACA/GGATGT 1 -- us2k10--------
rs9357981,2
C,F,O,A,H--35281546(-) AGAACA/GGTGCT 1 -- us2k121Minor allele frequency- G:0.16NS EA NA WA CSA 2185
rs1855501221,2
--35281556(+) TCACCA/GCTGAT 1 -- us2k10--------
rs1462954581,2
--35281581(+) GCAGAA/GAGATG 1 -- us2k10--------
rs1154046951,2
F--35281597(+) ATATCG/ATTTTC 1 -- us2k11Minor allele frequency- A:0.01WA 118
rs9357971,2
C,F--35281633(-) CACCGC/TGCTGC 1 -- us2k16Minor allele frequency- T:0.13NA WA EA 364
rs5542531,2
C,F,A--35281634(+) CAGCGC/TGGTGG 1 -- us2k110Minor allele frequency- T:0.24NA WA CSA EA 371

HapMap Linkage Disequilibrium report for FLJ41733 (44783212 - 44786446 bp)

Structural Variations
      Database of Genomic Variants (DGV) variations for FLJ41733: --
Site Specific Mutation Identification with PCR Assays
Search QIAGEN SeqTarget long-range PCR primers for resequencing FLJ41733
DNA2.0 Custom Variant and Variant Library Synthesis for FLJ41733

(in which this Gene is Involved, According to MalaCards, OMIM, UniProtKB, the University of Copenhagen DISEASES database, Genatlas, GeneTests, GAD, HuGE Navigator, and/or TGDB.)
About This Section

TryGeneCards Plus
  --

(in PubMed. Associations of this gene to articles via 1Entrez Gene, 2UniProtKB/Swiss-Prot, 3HGNC, 4GAD, 5PharmGKB, 6HMDB, 7DrugBank, 8UniProtKB/TrEMBL, 9 Novoseek, and/or 10fRNAdb)
About This Section

TryGeneCards Plus

PubMed article for FLJ41733 gene integrated from 10 sources:
(articles sorted by number of sources associating them with FLJ41733)
    Utopia: connect your pdf to the dynamic
world of online information

  1. A genome-wide association study of the metabolic syndrome in Indian Asian men. (PubMed id 20694148)1 Zabaneh D. and Balding D.J. (PLoS ONE 2010)

(in PubMed, OMIM, and NCBI Bookshelf)
About This Section

TryGeneCards Plus
 ANDOR
Aliases
Free Text  

  Query String
PubMed
OMIM
NCBI Bookshelf
  (Note: In FireFox, select the above section and copy using Ctrl-C)

(According to Entrez Gene, HGNC, AceView, euGenes, Ensembl, miRBase, ECgene, Kegg, and/or H-InvDB)
About This Section

TryGeneCards Plus
Entrez Gene: 400870 AceView: FLJ41733 Ensembl:ENSG00000225637 euGenes: HUgn400870

(According to HUGE)
About This Section

TryGeneCards Plus
  --

(According to PharmGKB, ATLAS, HORDE, IMGT, LEIDEN, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL, and/or others, e.g. Wikipedia and GeneReviews, via UniProtKB/Swiss-Prot)
About This Section

TryGeneCards Plus
  --

(Patent information from GeneIP,
Licensable technologies from WIS Yeda, Salk, Tufts,
IP news from LifeMap Sciences, Inc.)
About This Section

TryGeneCards Plus
Patent Information for FLJ41733 gene:
Search GeneIP for patents involving FLJ41733

GeneCards and IP:
Japan Patent Office Licenses GeneCards     European Patent Office Licenses GeneCards     Improving the IP Search



(Antibodies, recombinant proteins, and assays from EMD Millipore, R&D Systems, OriGene, QIAGEN, GenScript, Cell Signaling Technology, Novus Biologicals, Sino Biological, Enzo Life Sciences, Abcam, ProSpec, Cloud-Clone Corp., Thermo Fisher Scientific, LSBio, eBioscience, and/or others, Gene Editing from DNA2.0. Clones from OriGene, GenScript, Sino Biological, DNA2.0, SwitchGear Genomics, Vector BioLabs, Addgene, Cell lines from GenScript, and ESI BIO, Flow cytometery from eBioscience, PCR Arrays from QIAGEN, Drugs and/or compounds from EMD Millipore, Tocris Bioscience, Enzo Life Sciences, and/or ApexBio, In Situ Hybridization Assays from
Advanced Cell Diagnostics, Animal models from inGenious Targeting Laboratory, genOway)
About This Section

TryGeneCards Plus

 
 EMD Millipore genomic analysis products

  
 Browse Antibodies   Browse Cell Culture Products  
 Browse ELISAs   Browse Flow Cytometry Kits  
 Browse Primer Pairs   Browse Enzyme Activity Assays/Reagents  
 Browse ELISpot/FluoroSpot Kits/Development Modules   Browse TFB/Immunoprecipitation Assays  
 Browse Apoptosis Detection Kits/Reagents   Browse Ubiquitin Proteasome Pathway (UPP) Assay Kits/Reagents  
 Browse DNA Damage/Repair Kits/Reagents   Browse Luminex Assays  
 Browse Cell Selection/Detection Kits/Reagents   Browse Secondary Antibodies/Controls/Staining Reagents  
 Browse Recombinant/Natural Proteins   Browse Stem Cell Products  
 Browse cDNA Clones   Browse Proteome Profiler Antibody Arrays  
 Browse OriGene Antibodies   OriGene RNAi products in human, mouse, rat for FLJ41733  
 Browse OriGene qPCR primer pairs and template standards   Browse OriGene Protein Over-expression Lysates  
 OriGene Custom Mass Spec   Browse OriGene clones  
 OriGene qSTAR qPCR primer pairs in human, mouse for FLJ41733   Browse OriGene full length recombinant human proteins expressed in human HEK293 cells  
 Browse OriGene ORF clones   OriGene custom cloning services - gene synthesis, subcloning, mutagenesis, variant library, vector shuttling  
 OriGene Custom Antibody Services for FLJ41733   OriGene Custom Protein Services for FLJ41733  

 
 
 Block miRNA regulation of human, mouse, rat FLJ41733 using miScript Target Protectors SeqTarget long-range PCR primers for resequencing FLJ41733
 DNA Methylation CpG Assay Predesigned for Pyrosequencing in human, mouse, rat FLJ41733 Predesigned siRNA for gene silencing in human, mouse, rat FLJ41733
 QuantiFast Probe-based Assays in human, mouse, rat FLJ41733 QuantiTect SYBR Green Assays in human, mouse, rat FLJ41733
 Custom PCR Arrays for FLJ41733 Search Chromatin IP Primers for FLJ41733
 Pre-validated RT2 qPCR Primer Assay in human, mouse / rat FLJ41733  Search GeneGlobe Interaction Network for FLJ41733
 Regulatory tfbs in FLJ41733 promoter
 GenScript Custom Purified and Recombinant Proteins Services for FLJ41733 GenScript Custom cDNA clones with any tag delivered in your preferred vector Services for FLJ41733
 GenScript Custom Assay Services for FLJ41733 GenScript Custom overexpressing Cell Line Services for FLJ41733
 CloneReady with Over 120,000 Genes  Gene Synthesis: Any Gene in Any Vector
 Vector-based siRNA and miRNA, Ready for Transfection Gene Mutant Library, Variants up to 10^11
 Plasmid Preparation Custom Peptide Services
 Search for Antibodies & Assays

 Search Tocris compounds for FLJ41733
 Browse Sino Biological Proteins
 Browse Sino Biological Cell Lysates
 Browse Sino Biological cDNA Clones
 4000+ Proteins
 Search Sino Biological for antibodies, proteins & pathways
 Protein Production Services
 Transfection Reagents
 Protein A/G/L resins
 Isotyping reagents
 Search www.enzolifesciences.com for proteins, assays, substrates, inhibitors & antibodies

 Novus Biologicals
 Novus Tissue Slides
 Search for Antibodies for FLJ41733 at Abcam
 See all of Abcam's Antibodies, Kits and Proteins for FLJ41733
 Custom Antibody / Protein Production Service
 Bulk Purchasing
 Advantages of Rabbit Monoclonal antibodies
 Abcam protocols and scientific support
 Browse ProSpec Recombinant Proteins
 Browse Proteins at Cloud-Clone Corp.
 Browse Antibodies at Cloud-Clone Corp.
 Browse ELISAs at Cloud-Clone Corp.
 Browse CLIAs at Cloud-Clone Corp.



 Browse ESI BIO Cell Lines and PureStem Progenitors for FLJ41733
 Gene Synthesis
 Protein Engineering
 Variant Library Synthesis
 Codon Optimization
 Protein Production and Purification
 Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for FLJ41733
 Browse SwitchGear 3'UTR luciferase reporter plasmids for FLJ41733
 Browse SwitchGear Promoter luciferase reporter plasmids for FLJ41733
 Search ThermoFisher Antibodies for FLJ41733
 Search Vector BioLabs for ready-to-use adenovirus/AAV for human, mouse, rat FLJ41733
 inGenious Targeting Laboratory: Let us create your new Knockout/Knockin mouse model for FLJ41733
 inGenious Targeting Laboratory: Contact us about creating complex and humanized mouse models for FLJ41733
 Search LSBio for Antibodies for FLJ41733
Customized transgenic rodents for:
 Humanization
 Biomarker expression
 Off-target effect monitoring
 Translational medicine
 Tissue-specific gene expresssion
 Time-controlled gene expresssion
 Browse compounds at ApexBio
 Search Addgene for plasmids for FLJ41733
  Search eBioscience for proteins for FLJ41733
  Search eBioscience for elisas for FLJ41733
  eBioscience FlowRNA Probe Sets
       
GeneCards Homepage - Last full update: 7 May 2014 - Incrementals: 9 May 2014 , 2 Jun 2014 , 26 Jun 2014 , 30 Jun 2014 , 21 Aug 2014 , 8 Sep 2014

View Random Gene

Category
(GIFtS: )
GIFtS Group
The GeneCards human gene database gene index: 1 3 5 A B C D E F G H I J K L M N O P Q R S T U V W X Y Z 


Developed at the Crown Human Genome Center, Department of Molecular Genetics, the Weizmann Institute of Science

Hot genes      Disease genes      FLJ41733 gene at Home site.
Version: 3.12.224 13 Oct 2014
hostname: 356977-web1.xennexinc.com index build: 128 solr: 1.4