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Aliases for FLJ40194 Gene

Subcategory (RNA class) for FLJ40194 Gene

ncRNA

Quality Score for this RNA gene is

2

Aliases for FLJ40194 Gene

  • Uncharacterized FLJ40194 3 5

External Ids for FLJ40194 Gene

Previous GeneCards Identifiers for FLJ40194 Gene

  • GC17P044681
  • GC17P047326

Summaries for FLJ40194 Gene

GeneCards Summary for FLJ40194 Gene

FLJ40194 (Uncharacterized FLJ40194) is an RNA Gene, and is affiliated with the ncRNA class.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for FLJ40194 Gene

Genomics for FLJ40194 Gene

Regulatory Elements for FLJ40194 Gene

Enhancers for FLJ40194 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH17G049340 1.4 Ensembl ENCODE dbSUPER 5.6 +94.1 94052 3.5 TBL1XR1 BMI1 YBX1 ZNF366 RELB IKZF2 CREM ZNF362 CBFB CEBPB ZNF652 RPL21P124 ENSG00000250186 PHB ABI3 GNGT2 FLJ40194 GC17M049339 PIR41840
GH17G049356 1.4 ENCODE dbSUPER 5.6 +111.7 111695 6.7 HNRNPUL1 HDGF PKNOX1 FOXA2 CREB3L1 ARID4B SIN3A DMAP1 ZNF2 ZBTB7B ZNF652 FLJ40194 PIR41840 GC17M049339
GH17G049352 0.6 dbSUPER 5.6 +105.0 105017 2.3 ZNF146 HNF4A HES1 ZNF18 YY1 FOXA1 RPL21P124 ENSG00000250186 PHB ENSG00000207127 GNGT2 ABI3 ZNF652 FLJ40194 PIR41840 GC17M049339
GH17G049334 0.4 ENCODE 5.6 +86.7 86655 0.1 CEBPB FOS LOC102724596 ZNF652 ENSG00000250186 RPL21P124 PHB ABI3 GNGT2 FLJ40194 GC17M049339 GC17M049326
GH17G049251 1.2 Ensembl ENCODE 0.7 +4.1 4071 1.9 HDAC1 HDGF PKNOX1 FOXA2 NFIB NFXL1 BMI1 GATA2 FOS ZNF263 PHOSPHO1 GNGT2 ABI3 ZNF652 FLJ40194 GC17P049267
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around FLJ40194 on UCSC Golden Path with GeneCards custom track

Genomic Location for FLJ40194 Gene

Chromosome:
17
Start:
49,248,239 bp from pter
End:
49,258,665 bp from pter
Size:
10,427 bases
Orientation:
Plus strand

Genomic View for FLJ40194 Gene

Genes around FLJ40194 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
FLJ40194 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for FLJ40194 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for FLJ40194 Gene

Proteins for FLJ40194 Gene

  • Protein details for FLJ40194 Gene (UniProtKB/TrEMBL)

    Protein Symbol:
    Q8N7Z3
    Recommended name:
    FLJ40194 protein
    Protein Accession:
    Q8N7Z3

    Protein attributes for FLJ40194 Gene

    Size:
    131 amino acids
    Molecular mass:
    14427 Da
    Quaternary structure:
    No Data Available

neXtProt entry for FLJ40194 Gene

Post-translational modifications for FLJ40194 Gene

No Post-translational modifications

No data available for DME Specific Peptides for FLJ40194 Gene

Domains & Families for FLJ40194 Gene

Protein Domains for FLJ40194 Gene

ProtoNet:

Suggested Antigen Peptide Sequences for FLJ40194 Gene

GenScript: Design optimal peptide antigens:

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with FLJ40194: view

No data available for Gene Families and UniProtKB/Swiss-Prot for FLJ40194 Gene

Function for FLJ40194 Gene

Animal Model Products

Inhibitory RNA Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for FLJ40194 Gene

Localization for FLJ40194 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for FLJ40194 Gene

Pathways & Interactions for FLJ40194 Gene

SuperPathways for FLJ40194 Gene

No Data Available

Interacting Proteins for FLJ40194 Gene

Gene Ontology (GO) - Biological Process for FLJ40194 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for FLJ40194 Gene

Drugs & Compounds for FLJ40194 Gene

No Compound Related Data Available

Transcripts for FLJ40194 Gene

mRNA/cDNA for FLJ40194 Gene

(1) REFSEQ mRNAs :
(2) Additional mRNA sequences :
(11) Selected AceView cDNA sequences:
(3) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for FLJ40194 Gene

Uncharacterized FLJ40194:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for FLJ40194 Gene

No ASD Table

Relevant External Links for FLJ40194 Gene

GeneLoc Exon Structure for
FLJ40194

Expression for FLJ40194 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for FLJ40194 Gene

mRNA differential expression in normal tissues according to GTEx for FLJ40194 Gene

This gene is overexpressed in Testis (x46.8).

SOURCE GeneReport for Unigene cluster for FLJ40194 Gene:

Hs.446890
genes like me logo Genes that share expression patterns with FLJ40194: view

Primer Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for FLJ40194 Gene

Orthologs for FLJ40194 Gene

Evolution for FLJ40194 Gene

ENSEMBL:
Gene Tree for FLJ40194 (if available)
TreeFam:
Gene Tree for FLJ40194 (if available)

No data available for Orthologs for FLJ40194 Gene

Paralogs for FLJ40194 Gene

No data available for Paralogs for FLJ40194 Gene

Variants for FLJ40194 Gene

Sequence variations from dbSNP and Humsavar for FLJ40194 Gene

SNP ID Clin Chr 17 pos Sequence Context AA Info Type
rs1000018796 -- 49,250,936(+) GGTGT(-/G)GTGGT intron-variant
rs1000144894 -- 49,254,336(+) AACCA(C/T)GGGCA intron-variant
rs1000319502 -- 49,248,487(+) CAGTA(G/T)AAGCA intron-variant
rs1000557815 -- 49,255,610(+) GGAGG(C/G)CGAGG intron-variant
rs1000656779 -- 49,249,732(+) AGGCA(A/G)TGGCA intron-variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Relevant External Links for FLJ40194 Gene

Disorders for FLJ40194 Gene

Relevant External Links for FLJ40194

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
FLJ40194

No disorders were found for FLJ40194 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for FLJ40194 Gene

Publications for FLJ40194 Gene

  1. Identification of 23 new prostate cancer susceptibility loci using the iCOGS custom genotyping array. (PMID: 23535732) Eeles R.A. … Easton D.F. (Nat. Genet. 2013) 3 64
  2. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 3 64

Products for FLJ40194 Gene

Sources for FLJ40194 Gene

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