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Aliases for FLJ38122 Gene

Subcategory (RNA class) for FLJ38122 Gene

lncRNA

Quality Score for this RNA gene is

2

Aliases for FLJ38122 Gene

  • Uncharacterized LOC401289 3

External Ids for FLJ38122 Gene

Previous GeneCards Identifiers for FLJ38122 Gene

  • GC06P170499
  • GC06U901006
  • GC06P170581

Summaries for FLJ38122 Gene

GeneCards Summary for FLJ38122 Gene

FLJ38122 (Uncharacterized LOC401289) is an RNA Gene, and is affiliated with the lncRNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for FLJ38122 Gene

Genomics for FLJ38122 Gene

Genomic Location for FLJ38122 Gene

Start:
170,272,474 bp from pter
End:
170,279,887 bp from pter
Size:
7,414 bases
Orientation:
Plus strand

Genomic View for FLJ38122 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for FLJ38122 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for FLJ38122 Gene

No data available for Regulatory Elements for FLJ38122 Gene

Proteins for FLJ38122 Gene

Post-translational modifications for FLJ38122 Gene

No Post-translational modifications

No data available for DME Specific Peptides for FLJ38122 Gene

Domains for FLJ38122 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for FLJ38122 Gene

Function for FLJ38122 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for FLJ38122 Gene

Localization for FLJ38122 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for FLJ38122 Gene

Pathways for FLJ38122 Gene

SuperPathways for FLJ38122 Gene

No Data Available

Interacting Proteins for FLJ38122 Gene

Gene Ontology (GO) - Biological Process for FLJ38122 Gene

None

No data available for Pathways by source for FLJ38122 Gene

Transcripts for FLJ38122 Gene

mRNA/cDNA for FLJ38122 Gene

(1) Selected AceView cDNA sequences:
(1) Additional mRNA sequences :
(3) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for FLJ38122 Gene

Uncharacterized LOC401289:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for FLJ38122 Gene

No ASD Table

Relevant External Links for FLJ38122 Gene

GeneLoc Exon Structure for
FLJ38122

Expression for FLJ38122 Gene

mRNA expression in normal human tissues for FLJ38122 Gene

mRNA differential expression in normal tissues according to GTEx for FLJ38122 Gene

This gene is overexpressed in Pancreas (46.2).

SOURCE GeneReport for Unigene cluster for FLJ38122 Gene Hs.651962

genes like me logo Genes that share expressions with FLJ38122: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein expression and mRNA Expression by UniProt/SwissProt for FLJ38122 Gene

Orthologs for FLJ38122 Gene

Evolution for FLJ38122 Gene

ENSEMBL:
Gene Tree for FLJ38122 (if available)
TreeFam:
Gene Tree for FLJ38122 (if available)

No data available for Orthologs for FLJ38122 Gene

Paralogs for FLJ38122 Gene

No data available for Paralogs for FLJ38122 Gene

Variants for FLJ38122 Gene

Sequence variations from dbSNP and Humsavar for FLJ38122 Gene

SNP ID Clin Chr 06 pos Sequence Context AA Info Type MAF
rs725239 -- 170,279,302(-) TTTCT(C/T)GTTTC nc-transcript-variant
rs747754 -- 170,275,315(-) GGGTG(A/G)CATCC nc-transcript-variant
rs753875 -- 170,274,253(+) CACGA(C/T)TGCTT nc-transcript-variant
rs959025 -- 170,279,566(-) ATAAG(A/G)AAACA downstream-variant-500B
rs959026 -- 170,279,476(-) AGAGT(A/G)CTAGA downstream-variant-500B

Relevant External Links for FLJ38122 Gene

HapMap Linkage Disequilibrium report
FLJ38122

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Structural Variations from Database of Genomic Variants (DGV) for FLJ38122 Gene

Disorders for FLJ38122 Gene

No disorders were found for FLJ38122 Gene.

No data available for UniProtKB/Swiss-Prot for FLJ38122 Gene

Publications for FLJ38122 Gene

  1. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 3

Products for FLJ38122 Gene

Sources for FLJ38122 Gene

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