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Aliases for FLJ37505 Gene

Subcategory (RNA class) for FLJ37505 Gene

lncRNA

Quality Score for this RNA gene is

2

Aliases for FLJ37505 Gene

  • Uncharacterized LOC400087 3

External Ids for FLJ37505 Gene

ORGUL Members for FLJ37505 Gene

Summaries for FLJ37505 Gene

GeneCards Summary for FLJ37505 Gene

FLJ37505 (Uncharacterized LOC400087) is an RNA Gene, and belongs to the lncRNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for FLJ37505 Gene

Genomics for FLJ37505 Gene

Genomic Location for FLJ37505 Gene

Start:
127,881,617 bp from pter
End:
127,898,639 bp from pter
Size:
17,023 bases
Orientation:
Plus strand

Genomic View for FLJ37505 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for FLJ37505 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for FLJ37505 Gene

No data available for Regulatory Elements for FLJ37505 Gene

Proteins for FLJ37505 Gene

Post-translational modifications for FLJ37505 Gene

No Post-translational modifications

No data available for DME Specific Peptides for FLJ37505 Gene

Domains for FLJ37505 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for FLJ37505 Gene

Function for FLJ37505 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for FLJ37505 Gene

Localization for FLJ37505 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for FLJ37505 Gene

Pathways for FLJ37505 Gene

SuperPathways for FLJ37505 Gene

No Data Available

Interacting Proteins for FLJ37505 Gene

Gene Ontology (GO) - Biological Process for FLJ37505 Gene

None

No data available for Pathways by source for FLJ37505 Gene

Transcripts for FLJ37505 Gene

mRNA/cDNA for FLJ37505 Gene

(2) Additional mRNA sequences :
(1) Selected AceView cDNA sequences:
(3) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for FLJ37505 Gene

Uncharacterized LOC400087:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for FLJ37505 Gene

No ASD Table

Relevant External Links for FLJ37505 Gene

GeneLoc Exon Structure for
FLJ37505

Expression for FLJ37505 Gene

mRNA expression in normal human tissues for FLJ37505 Gene

SOURCE GeneReport for Unigene cluster for FLJ37505 Gene Hs.524846

genes like me logo Genes that share expressions with FLJ37505: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein expression and mRNA Expression by UniProt/SwissProt for FLJ37505 Gene

Orthologs for FLJ37505 Gene

This gene was present in the common ancestor of human and mouse.

Orthologs for FLJ37505 Gene

Organism Taxonomy Gene Similarity Type Details
mouse
(Mus musculus)
Mammalia 4933438B17Rik 16
Species with no ortholog for FLJ37505:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • chimpanzee (Pan troglodytes)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • cow (Bos Taurus)
  • dog (Canis familiaris)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for FLJ37505 Gene

ENSEMBL:
Gene Tree for FLJ37505 (if available)
TreeFam:
Gene Tree for FLJ37505 (if available)

Paralogs for FLJ37505 Gene

No data available for Paralogs for FLJ37505 Gene

Variants for FLJ37505 Gene

Sequence variations from dbSNP and Humsavar for FLJ37505 Gene

SNP ID Clin Chr 12 pos Sequence Context AA Info Type MAF
rs764376 -- 127,897,150(+) CCTTA(A/C)AAGAG nc-transcript-variant
rs764377 -- 127,897,105(+) CCATA(C/T)TCAAG nc-transcript-variant
rs998204 -- 127,881,506(-) CTCCC(C/T)GTGGC upstream-variant-2KB
rs1352354 -- 127,889,427(+) GGGCT(C/G)TCAAT intron-variant
rs1352366 -- 127,893,469(-) ATTGA(C/T)TTTTT intron-variant

Structural Variations from Database of Genomic Variants (DGV) for FLJ37505 Gene

Variant ID Type Subtype PubMed ID
nsv899615 CNV Loss 21882294

Relevant External Links for FLJ37505 Gene

HapMap Linkage Disequilibrium report
FLJ37505

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for FLJ37505 Gene

Disorders for FLJ37505 Gene

No disorders were found for FLJ37505 Gene.

No data available for UniProtKB/Swiss-Prot for FLJ37505 Gene

Publications for FLJ37505 Gene

  1. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 3
  2. Diversification of transcriptional modulation: large-scale identification and characterization of putative alternative promoters of human genes. (PMID: 16344560) Kimura K. … Sugano S. (Genome Res. 2006) 3

Products for FLJ37505 Gene

Sources for FLJ37505 Gene

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