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Aliases for FLJ37453 Gene

Subcategory (RNA class) for FLJ37453 Gene

antisense

Quality Score for this RNA gene is

2

Aliases for FLJ37453 Gene

  • Uncharacterized LOC729614 3

External Ids for FLJ37453 Gene

Summaries for FLJ37453 Gene

GeneCards Summary for FLJ37453 Gene

FLJ37453 (Uncharacterized LOC729614) is a RNA Gene, and belongs to antisense RNA class.

fRNAdb sequence ontologies for FLJ37453 Gene

  • ncRNA: An RNA transcript that does not encode for a protein rather the RNA molecule is the gene product.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for FLJ37453 Gene

Genomics for FLJ37453 Gene

Genomic Location for FLJ37453 Gene

Start:
15,834,215 bp from pter
End:
15,848,147 bp from pter
Size:
13,933 bases
Orientation:
Minus strand

Genomic View for FLJ37453 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for FLJ37453 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for FLJ37453 Gene

Regulatory Elements for FLJ37453 Gene

Proteins for FLJ37453 Gene

Post-translational modifications for FLJ37453 Gene

No Post-translational modifications

No data available for DME Specific Peptides for FLJ37453 Gene

Domains for FLJ37453 Gene

No data available for Gene Families , Protein Domains and UniProtKB/Swiss-Prot for FLJ37453 Gene

Function for FLJ37453 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for FLJ37453 Gene

Localization for FLJ37453 Gene

No data available for Gene Ontology (GO) - Cellular Components for FLJ37453 Gene

Pathways for FLJ37453 Gene

SuperPathways for FLJ37453 Gene

No Data Available

Interacting Proteins for FLJ37453 Gene

Gene Ontology (GO) - Biological Process for FLJ37453 Gene

None

No data available for Pathways by source for FLJ37453 Gene

Transcripts for FLJ37453 Gene

mRNA/cDNA for FLJ37453 Gene

(5) Additional mRNA sequences :
(2) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for FLJ37453 Gene

Uncharacterized LOC729614:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for FLJ37453 Gene

No ASD Table

Relevant External Links for FLJ37453 Gene

GeneLoc Exon Structure for
FLJ37453

Expression for FLJ37453 Gene

mRNA expression in normal human tissues for FLJ37453 Gene

mRNA expression in embryonic tissues and stem cells from LifeMap Discovery

SOURCE GeneReport for Unigene cluster for FLJ37453 Gene Hs.119298

genes like me logo Genes that share expressions with FLJ37453: view

Orthologs for FLJ37453 Gene

This gene was present in the common ancestor of human and mouse.

Orthologs for FLJ37453 Gene

Organism Taxonomy Gene Similarity Type Details
mouse
(Mus musculus)
Mammalia B330016D10Rik 16
Species with no ortholog for FLJ37453:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • chimpanzee (Pan troglodytes)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • cow (Bos Taurus)
  • dog (Canis familiaris)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for FLJ37453 Gene

ENSEMBL:
Gene Tree for FLJ37453 (if available)
TreeFam:
Gene Tree for FLJ37453 (if available)

Paralogs for FLJ37453 Gene

No data available for Paralogs for FLJ37453 Gene

Variants for FLJ37453 Gene

Sequence variations from dbSNP and Humsavar for FLJ37453 Gene

SNP ID Clin Chr 01 pos Sequence Context AA Info Type MAF
rs13626 -- 15,835,370(+) CCGAT(A/G)GGAGA nc-transcript-variant
rs1002165 -- 15,838,292(-) TGCTG(C/T)TCCTC intron-variant
rs1047596 -- 15,835,572(-) AGCAC(G/T)GGGAG nc-transcript-variant
rs1047597 -- 15,835,559(-) GGCAG(C/G)GGGTA nc-transcript-variant
rs1566500 -- 15,837,693(-) CAACA(C/T)CCTCT intron-variant

Structural Variations from Database of Genomic Variants (DGV) for FLJ37453 Gene

Variant ID Type Subtype PubMed ID
nsv524044 CNV Loss 19592680
nsv870503 CNV Loss 21882294
nsv833647 CNV Loss 17160897
nsv871162 CNV Gain 21882294
nsv3409 CNV Loss 18451855
nsv511126 CNV Loss 21212237

Relevant External Links for FLJ37453 Gene

HapMap Linkage Disequilibrium report
FLJ37453

Disorders for FLJ37453 Gene

No disorders were found for FLJ37453 Gene.

No data available for UniProtKB/Swiss-Prot for FLJ37453 Gene

Publications for FLJ37453 Gene

  1. The sequence of the human genome. (PMID: 11181995) Venter J.C. … Zhu X. (Science 2001) 3
  2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 3
  3. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 3

Products for FLJ37453 Gene

  • QIAGEN qRT-PCR Assays for microRNAs that regulate FLJ37453
    • QuantiTect SYBR Green Assays in human,mouse,rat
    • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
    • QuantiFast Probe-based Assays in human,mouse,rat
    • Predesigned siRNA for gene silencing in human,mouse,rat for FLJ37453
    • Block miRNA regulation of FLJ37453 using miScript Target Protectors

    Sources for FLJ37453 Gene

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