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Aliases for FLJ36777 Gene

Subcategory (RNA class) for FLJ36777 Gene

ncRNA

Quality Score for this RNA gene is

2

Aliases for FLJ36777 Gene

  • Uncharacterized LOC730971 3
  • RP11-367J11.3 5

External Ids for FLJ36777 Gene

Previous GeneCards Identifiers for FLJ36777 Gene

  • GC04U900698

Summaries for FLJ36777 Gene

GeneCards Summary for FLJ36777 Gene

FLJ36777 (Uncharacterized LOC730971) is an RNA Gene, and is affiliated with the ncRNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for FLJ36777 Gene

Genomics for FLJ36777 Gene

Regulatory Elements for FLJ36777 Gene

Enhancers for FLJ36777 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH04F007102 1 ENCODE 14.1 -0.1 -135 3.0 PKNOX1 MLX ARID4B DMAP1 ZNF48 YY1 ZNF143 ZNF263 SP3 SP5 FLJ36777 GRPEL1 GC04M007112 RN7SKP36
GH04F007094 0.5 ENCODE 12 +8.1 8132 1.2 ZNF146 RNF2 ID3 FLJ36777 GC04P007090
GH04F007084 0.7 Ensembl 7.3 +18.8 18785 0.4 ZNF639 ESRRA ETV1 ARID4B ZNF175 YY1 ELK1 ZNF26 TRIM24 TAF7 BLOC1S4 FLJ36777 PIR59488 GC04P007090
GH04F007539 0.7 ENCODE 5.1 -436.5 -436463 1.3 KLF1 MAZ SP3 TAF1 SP2 ZIC2 GABPA ZFP69B PATZ1 KLF9 FLJ36777 GC04M007519 AFAP1-AS1
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around FLJ36777 on UCSC Golden Path with GeneCards custom track

Promoters for FLJ36777 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters
ENSR00001857406 185 1201 PKNOX1 MLX ARID4B DMAP1 ZNF48 YY1 SP3 SP5 MXD4 MIER2
ENSR00001857405 1285 201 MLX ARID4B DMAP1 ZNF48 ZNF143 ZNF263 SP5 MXD4 MIER2 REST

Genomic Location for FLJ36777 Gene

Chromosome:
4
Start:
7,094,571 bp from pter
End:
7,103,385 bp from pter
Size:
8,815 bases
Orientation:
Minus strand

Genomic View for FLJ36777 Gene

Genes around FLJ36777 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
FLJ36777 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for FLJ36777 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for FLJ36777 Gene

Proteins for FLJ36777 Gene

Post-translational modifications for FLJ36777 Gene

No Post-translational modifications

No data available for DME Specific Peptides for FLJ36777 Gene

Domains & Families for FLJ36777 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for FLJ36777 Gene

Function for FLJ36777 Gene

Phenotypes for FLJ36777 Gene

GenomeRNAi human phenotypes for FLJ36777:
genes like me logo Genes that share phenotypes with FLJ36777: view

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for FLJ36777 Gene

Localization for FLJ36777 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for FLJ36777 Gene

Pathways & Interactions for FLJ36777 Gene

SuperPathways for FLJ36777 Gene

No Data Available

Interacting Proteins for FLJ36777 Gene

Gene Ontology (GO) - Biological Process for FLJ36777 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for FLJ36777 Gene

Transcripts for FLJ36777 Gene

mRNA/cDNA for FLJ36777 Gene

(3) Additional mRNA sequences :
(3) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for FLJ36777 Gene

Uncharacterized LOC730971:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for FLJ36777 Gene

No ASD Table

Relevant External Links for FLJ36777 Gene

GeneLoc Exon Structure for
FLJ36777

Expression for FLJ36777 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for FLJ36777 Gene

SOURCE GeneReport for Unigene cluster for FLJ36777 Gene:

Hs.591718
genes like me logo Genes that share expression patterns with FLJ36777: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for FLJ36777 Gene

Orthologs for FLJ36777 Gene

Evolution for FLJ36777 Gene

ENSEMBL:
Gene Tree for FLJ36777 (if available)
TreeFam:
Gene Tree for FLJ36777 (if available)

No data available for Orthologs for FLJ36777 Gene

Paralogs for FLJ36777 Gene

No data available for Paralogs for FLJ36777 Gene

Variants for FLJ36777 Gene

Sequence variations from dbSNP and Humsavar for FLJ36777 Gene

SNP ID Clin Chr 04 pos Sequence Context AA Info Type
rs10440167 -- 7,103,975(+) GGCAG(C/T)TGAGT upstream-variant-2KB
rs111349576 -- 7,104,554(+) GGCCC(C/G)ATGCA upstream-variant-2KB
rs111518904 -- 7,104,231(+) CCATC(A/T)TCCCT upstream-variant-2KB
rs111612811 -- 7,105,041(+) TACTC(-/T)TTTTT upstream-variant-2KB
rs111986826 -- 7,102,282(+) AAATC(C/T)CATAG intron-variant

Structural Variations from Database of Genomic Variants (DGV) for FLJ36777 Gene

Variant ID Type Subtype PubMed ID
esv2759221 CNV gain 17122850
esv34033 CNV loss 18971310
esv34196 OTHER inversion 12058347
esv3599516 CNV loss 21293372
nsv428436 CNV gain 18775914
nsv461191 CNV loss 19166990
nsv469847 CNV gain 16826518

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Variation tolerance and Relevant External Links for FLJ36777 Gene

Disorders for FLJ36777 Gene

Relevant External Links for FLJ36777

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
FLJ36777

No disorders were found for FLJ36777 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for FLJ36777 Gene

Publications for FLJ36777 Gene

  1. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 3 64
  2. Toward a complete human genome sequence. (PMID: 9847074) Sulston J.E. … Waterston R. (Genome Res. 1998) 3 64

Products for FLJ36777 Gene

Sources for FLJ36777 Gene

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