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Aliases for FLJ36000 Gene

Subcategory (RNA class) for FLJ36000 Gene

ncRNA

Quality Score for this RNA gene is

2

Aliases for FLJ36000 Gene

  • Uncharacterized FLJ36000 3 5

External Ids for FLJ36000 Gene

Previous GeneCards Identifiers for FLJ36000 Gene

  • GC17M023983
  • GC17P021758
  • GC17P022054
  • GC17U900468
  • GC17P021904
  • GC17P021930
  • GC17P022260
  • GC17P022568
  • GC17P022600

Summaries for FLJ36000 Gene

GeneCards Summary for FLJ36000 Gene

FLJ36000 (Uncharacterized FLJ36000) is an RNA Gene, and is affiliated with the ncRNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for FLJ36000 Gene

Genomics for FLJ36000 Gene

Regulatory Elements for FLJ36000 Gene

Enhancers for FLJ36000 Gene
GeneHancer Identifier Score Enhancer Sources TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Other Gene Targets for Enhancer

Enhancers around FLJ36000 on UCSC Golden Path with GeneCards custom track

Genomic Location for FLJ36000 Gene

Chromosome:
17
Start:
22,406,019 bp from pter
End:
22,413,744 bp from pter
Size:
7,726 bases
Orientation:
Plus strand

Genomic View for FLJ36000 Gene

Genes around FLJ36000 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
FLJ36000 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for FLJ36000 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for FLJ36000 Gene

Proteins for FLJ36000 Gene

Post-translational modifications for FLJ36000 Gene

No Post-translational modifications

No data available for DME Specific Peptides for FLJ36000 Gene

Domains & Families for FLJ36000 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for FLJ36000 Gene

Function for FLJ36000 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for FLJ36000 Gene

Localization for FLJ36000 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for FLJ36000 Gene

Pathways & Interactions for FLJ36000 Gene

SuperPathways for FLJ36000 Gene

No Data Available

Interacting Proteins for FLJ36000 Gene

Gene Ontology (GO) - Biological Process for FLJ36000 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for FLJ36000 Gene

Drugs & Compounds for FLJ36000 Gene

No Compound Related Data Available

Transcripts for FLJ36000 Gene

mRNA/cDNA for FLJ36000 Gene

(3) Additional mRNA sequences :
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for FLJ36000 Gene

Uncharacterized FLJ36000:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for FLJ36000 Gene

No ASD Table

Relevant External Links for FLJ36000 Gene

GeneLoc Exon Structure for
FLJ36000

Expression for FLJ36000 Gene

mRNA expression in normal human tissues for FLJ36000 Gene

mRNA expression in normal human tissues for FLJ36000 Gene

mRNA differential expression in normal tissues according to GTEx for FLJ36000 Gene

This gene is overexpressed in Testis (x51.7).

SOURCE GeneReport for Unigene cluster for FLJ36000 Gene Hs.310247

genes like me logo Genes that share expression patterns with FLJ36000: view

Primer Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , mRNA Expression by UniProt/SwissProt and Protein tissue co-expression partners for FLJ36000 Gene

Orthologs for FLJ36000 Gene

Evolution for FLJ36000 Gene

ENSEMBL:
Gene Tree for FLJ36000 (if available)
TreeFam:
Gene Tree for FLJ36000 (if available)

No data available for Orthologs for FLJ36000 Gene

Paralogs for FLJ36000 Gene

No data available for Paralogs for FLJ36000 Gene

Variants for FLJ36000 Gene

Sequence variations from dbSNP and Humsavar for FLJ36000 Gene

SNP ID Clin Chr 17 pos Sequence Context AA Info Type
rs1850564 -- 22,412,465(+) ACTGG(C/T)CTCTC nc-transcript-variant
rs1850565 -- 22,412,655(+) CCTCC(A/G)GGGCG nc-transcript-variant
rs907707 -- 22,410,754(-) GAGGA(C/G)AGCAT nc-transcript-variant
rs907708 -- 22,410,720(-) GTGCA(A/G)AAGAA nc-transcript-variant
rs2019216 -- 22,410,321(+) CACTT(C/T)GCACC nc-transcript-variant

Structural Variations from Database of Genomic Variants (DGV) for FLJ36000 Gene

Variant ID Type Subtype PubMed ID
dgv937e1 CNV Complex 17122850
esv2660756 CNV Deletion 23128226
esv2751621 CNV Gain 17911159
dgv3113n71 CNV Gain 21882294
dgv3114n71 CNV Gain 21882294
nsv516664 CNV Gain+Loss 19592680
nsv470584 CNV Gain 18288195
dgv539e199 CNV Deletion 23128226
dgv3116n71 CNV Loss 21882294
dgv3119n71 CNV Gain 21882294
dgv3120n71 CNV Gain 21882294
dgv3121n71 CNV Gain 21882294
essv4843 CNV CNV 17122850
essv886 CNV CNV 17122850
dgv364n27 CNV Gain 19166990
esv2751622 CNV Gain 17911159
nsv457715 CNV Loss 19166990
dgv3124n71 CNV Gain 21882294
nsv833404 CNV Loss 17160897
nsv833405 CNV Gain+Loss 17160897
dgv938e1 CNV Complex 17122850
nsv428339 CNV Gain 18775914
dgv939e1 CNV Complex 17122850
nsv907986 CNV Loss 21882294
dgv3125n71 CNV Gain 21882294
dgv3126n71 CNV Gain 21882294
dgv940e1 CNV Complex 17122850
nsv2011 CNV Insertion 18451855
nsv435685 CNV Deletion 17901297
nsv820960 CNV Duplication 20802225
dgv3127n71 CNV Gain 21882294
nsv9525 CNV Gain+Loss 18304495
nsv499235 CNV Gain 21111241
esv27419 CNV Gain+Loss 19812545
nsv159 CNV Insertion 15895083
nsv457716 CNV Loss 19166990

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Variation tolerance and Relevant External Links for FLJ36000 Gene

Disorders for FLJ36000 Gene

No disorders were found for FLJ36000 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for FLJ36000 Gene

Publications for FLJ36000 Gene

  1. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 3 67
  2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 3

Products for FLJ36000 Gene

Sources for FLJ36000 Gene

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