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Aliases for FLJ35934 Gene

Subcategory (RNA class) for FLJ35934 Gene

ncRNA

Quality Score for this RNA gene is

2

Aliases for FLJ35934 Gene

  • FLJ35934 3

External Ids for FLJ35934 Gene

Previous GeneCards Identifiers for FLJ35934 Gene

  • GC17P018515
  • GC17P018255
  • GC17U901123
  • GC17P018389

Summaries for FLJ35934 Gene

GeneCards Summary for FLJ35934 Gene

FLJ35934 (FLJ35934) is an RNA Gene, and is affiliated with the ncRNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for FLJ35934 Gene

Genomics for FLJ35934 Gene

Regulatory Elements for FLJ35934 Gene

Enhancers for FLJ35934 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
- Elite enhancer/Elite enhancer-gene association

Enhancers around FLJ35934 on UCSC Golden Path with GeneCards custom track

Promoters for FLJ35934 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters

Genomic Location for FLJ35934 Gene

Chromosome:
17
Start:
18,411,159 bp from pter
End:
18,414,388 bp from pter
Size:
3,230 bases
Orientation:
Plus strand

Genomic View for FLJ35934 Gene

Genes around FLJ35934 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
FLJ35934 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for FLJ35934 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for FLJ35934 Gene

Proteins for FLJ35934 Gene

Post-translational modifications for FLJ35934 Gene

No Post-translational modifications

No data available for DME Specific Peptides for FLJ35934 Gene

Domains & Families for FLJ35934 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for FLJ35934 Gene

Function for FLJ35934 Gene

Phenotypes for FLJ35934 Gene

GenomeRNAi human phenotypes for FLJ35934:
genes like me logo Genes that share phenotypes with FLJ35934: view

Animal Model Products

Inhibitory RNA Products

Clone Products

Flow Cytometry Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for FLJ35934 Gene

Localization for FLJ35934 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for FLJ35934 Gene

Pathways & Interactions for FLJ35934 Gene

SuperPathways for FLJ35934 Gene

No Data Available

Interacting Proteins for FLJ35934 Gene

Gene Ontology (GO) - Biological Process for FLJ35934 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for FLJ35934 Gene

Drugs & Compounds for FLJ35934 Gene

No Compound Related Data Available

Transcripts for FLJ35934 Gene

mRNA/cDNA for FLJ35934 Gene

(2) Additional mRNA sequences :
(8) Selected AceView cDNA sequences:
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for FLJ35934 Gene

FLJ35934:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for FLJ35934 Gene

No ASD Table

Relevant External Links for FLJ35934 Gene

GeneLoc Exon Structure for
FLJ35934

Expression for FLJ35934 Gene

mRNA expression in normal human tissues for FLJ35934 Gene

mRNA expression in normal human tissues for FLJ35934 Gene

mRNA differential expression in normal tissues according to GTEx for FLJ35934 Gene

This gene is overexpressed in Testis (x29.4).

SOURCE GeneReport for Unigene cluster for FLJ35934 Gene:

Hs.375092
genes like me logo Genes that share expression patterns with FLJ35934: view

Primer Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for FLJ35934 Gene

Orthologs for FLJ35934 Gene

Evolution for FLJ35934 Gene

ENSEMBL:
Gene Tree for FLJ35934 (if available)
TreeFam:
Gene Tree for FLJ35934 (if available)

No data available for Orthologs for FLJ35934 Gene

Paralogs for FLJ35934 Gene

No data available for Paralogs for FLJ35934 Gene

Variants for FLJ35934 Gene

Sequence variations from dbSNP and Humsavar for FLJ35934 Gene

SNP ID Clin Chr 17 pos Sequence Context AA Info Type
rs475013 -- 18,413,198(-) TGTTC(A/C)TAGTG intron-variant
rs476039 -- 18,413,062(-) AGAAA(A/C)ACATT intron-variant
rs536552 -- 18,411,119(-) GAAAG(A/G)GCAGA upstream-variant-2KB
rs560289 -- 18,410,828(+) ccccc(A/C/G)ccacc upstream-variant-2KB
rs636275 -- 18,411,025(+) TTtcc(A/C)ctccc upstream-variant-2KB

Structural Variations from Database of Genomic Variants (DGV) for FLJ35934 Gene

Variant ID Type Subtype PubMed ID
dgv3110n100 CNV gain 25217958
dgv3111n100 CNV gain 25217958
dgv3112n100 CNV gain+loss 25217958
dgv3113n100 CNV loss 25217958
dgv55e203 CNV gain+loss 21179565
esv2758677 CNV gain+loss 17122850
nsv1066489 CNV gain 25217958
nsv155 OTHER inversion 15895083
nsv428333 CNV gain 18775914
nsv469661 CNV gain 16826518
nsv499114 OTHER inversion 21111241
nsv827913 CNV gain 20364138
nsv827914 CNV gain 20364138
nsv833386 CNV gain 17160897
nsv833387 CNV loss 17160897
nsv833388 CNV loss 17160897
nsv9504 CNV gain+loss 18304495
nsv962275 CNV duplication 23825009

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Variation tolerance and Relevant External Links for FLJ35934 Gene

Disorders for FLJ35934 Gene

No disorders were found for FLJ35934 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for FLJ35934 Gene

Publications for FLJ35934 Gene

  1. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 3 65
  2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 3 65

Products for FLJ35934 Gene

Sources for FLJ35934 Gene

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