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Aliases for FLJ34503 Gene

Subcategory (RNA class) for FLJ34503 Gene

ncRNA

Quality Score for this RNA gene is

2

Aliases for FLJ34503 Gene

  • Uncharacterized FLJ34503 3
  • FO393415.1 5

External Ids for FLJ34503 Gene

Previous GeneCards Identifiers for FLJ34503 Gene

  • GC06P114248
  • GC06P114270
  • GC06P114331
  • GC06P114226

Summaries for FLJ34503 Gene

GeneCards Summary for FLJ34503 Gene

FLJ34503 (Uncharacterized FLJ34503) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for FLJ34503 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for FLJ34503 Gene

Genomics for FLJ34503 Gene

GeneHancer (GH) Regulatory Elements for FLJ34503 Gene

Promoters and enhancers for FLJ34503 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH06I113903 Enhancer 0.9 Ensembl ENCODE 566.9 +0.4 391 2.2 ELF3 SOX5 TFAP4 SAP130 SP5 ARID4B REST ELF1 RAD21 GABPA FLJ34503 GC06M113929
GH06I113854 Promoter/Enhancer 3 UCNEbase EPDnew FANTOM5 Ensembl ENCODE dbSUPER 15.6 -46.3 -46318 7.5 HDGF PKNOX1 FOXA2 SMAD1 ARNT ARID4B SIN3A FEZF1 DMAP1 YBX1 MARCKS FLJ34503 RPS27AP11 HDAC2 GC06P113861
GH06I113994 Enhancer 1.3 Ensembl ENCODE dbSUPER 9.8 +93.6 93612 6.4 PKNOX1 ARID4B GLIS2 ZNF143 FOS REST MIER2 TSHZ1 PPARG KAT8 HDAC2 FLJ34503 HDAC2-AS2
GH06I113968 Promoter/Enhancer 2.3 EPDnew Ensembl ENCODE dbSUPER 4.4 +66.5 66453 3.2 CLOCK MLX ZFP64 DMAP1 YY1 SLC30A9 ZNF213 ZNF143 SP3 NFYC HDAC2 HDAC2-AS2 RPS27AP11 FLJ34503
GH06I113595 Enhancer 0.8 Ensembl ENCODE 10.2 -307.6 -307642 2.4 FOXA2 ZNF10 EBF1 NR2F2 FOXA1 OSR2 ZNF335 CTBP1 GATA3 JUND FLJ34503 LINC02541 GC06P113589 GC06P113618
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around FLJ34503 on UCSC Golden Path with GeneCards custom track

Top Transcription factor binding sites by QIAGEN in the FLJ34503 gene promoter:

Genomic Locations for FLJ34503 Gene

Genomic Locations for FLJ34503 Gene
chr6:113,904,138-113,921,642
(GRCh38/hg38)
Size:
17,505 bases
Orientation:
Plus strand
chr6:114,225,302-114,242,806
(GRCh37/hg19)

Genomic View for FLJ34503 Gene

Genes around FLJ34503 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
FLJ34503 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for FLJ34503 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for FLJ34503 Gene

Proteins for FLJ34503 Gene

Post-translational modifications for FLJ34503 Gene

No Post-translational modifications

No data available for DME Specific Peptides for FLJ34503 Gene

Domains & Families for FLJ34503 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for FLJ34503 Gene

Function for FLJ34503 Gene

Phenotypes From GWAS Catalog for FLJ34503 Gene

Animal Model Products

Inhibitory RNA Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for FLJ34503 Gene

Localization for FLJ34503 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for FLJ34503 Gene

Pathways & Interactions for FLJ34503 Gene

SuperPathways for FLJ34503 Gene

No Data Available

Interacting Proteins for FLJ34503 Gene

Gene Ontology (GO) - Biological Process for FLJ34503 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for FLJ34503 Gene

Drugs & Compounds for FLJ34503 Gene

No Compound Related Data Available

Transcripts for FLJ34503 Gene

mRNA/cDNA for FLJ34503 Gene

(2) REFSEQ mRNAs :
(3) Additional mRNA sequences :
(4) Selected AceView cDNA sequences:
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for FLJ34503 Gene

Uncharacterized FLJ34503:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for FLJ34503 Gene

No ASD Table

Relevant External Links for FLJ34503 Gene

GeneLoc Exon Structure for
FLJ34503

Expression for FLJ34503 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for FLJ34503 Gene

mRNA differential expression in normal tissues according to GTEx for FLJ34503 Gene

This gene is overexpressed in Heart - Left Ventricle (x7.5).

SOURCE GeneReport for Unigene cluster for FLJ34503 Gene:

Hs.376634
genes like me logo Genes that share expression patterns with FLJ34503: view

Primer Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for FLJ34503 Gene

Orthologs for FLJ34503 Gene

Evolution for FLJ34503 Gene

ENSEMBL:
Gene Tree for FLJ34503 (if available)
TreeFam:
Gene Tree for FLJ34503 (if available)

No data available for Orthologs for FLJ34503 Gene

Paralogs for FLJ34503 Gene

No data available for Paralogs for FLJ34503 Gene

Variants for FLJ34503 Gene

Sequence variations from dbSNP and Humsavar for FLJ34503 Gene

SNP ID Clin Chr 06 pos Variation AA Info Type
rs1000142786 -- 113,909,500(+) A/G intron_variant
rs1000439982 -- 113,915,252(+) C/T intron_variant
rs1000776494 -- 113,919,400(+) T/A non_coding_transcript_variant
rs1000798207 -- 113,917,430(+) T/A intron_variant
rs1000828793 -- 113,919,771(+) A/G intron_variant

Structural Variations from Database of Genomic Variants (DGV) for FLJ34503 Gene

Variant ID Type Subtype PubMed ID
dgv1825e212 CNV loss 25503493
esv2732594 CNV deletion 23290073
nsv1121655 CNV deletion 24896259
nsv830779 CNV loss 17160897

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Variation tolerance and Additional Variant Information for FLJ34503 Gene

Disorders for FLJ34503 Gene

Additional Disease Information for FLJ34503

No disorders were found for FLJ34503 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for FLJ34503 Gene

Publications for FLJ34503 Gene

  1. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T … Sugano S (Nature genetics 2004) 3 58
  2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg RL … Mammalian Gene Collection Program Team (Proceedings of the National Academy of Sciences of the United States of America 2002) 3 58

Products for FLJ34503 Gene

Sources for FLJ34503 Gene

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