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Aliases for FLJ33581 Gene

Subcategory (RNA class) for FLJ33581 Gene

lncRNA

Quality Score for this RNA gene is

2

Aliases for FLJ33581 Gene

  • Uncharacterized LOC400839 3

External Ids for FLJ33581 Gene

ORGUL Members for FLJ33581 Gene

Previous GeneCards Identifiers for FLJ33581 Gene

  • GC20P024130
  • GC20U900250
  • GC20P024181

Summaries for FLJ33581 Gene

GeneCards Summary for FLJ33581 Gene

FLJ33581 (Uncharacterized LOC400839) is an RNA Gene, and is affiliated with the lncRNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for FLJ33581 Gene

Genomics for FLJ33581 Gene

Genomic Location for FLJ33581 Gene

Start:
24,199,767 bp from pter
End:
24,224,588 bp from pter
Size:
24,822 bases
Orientation:
Plus strand

Genomic View for FLJ33581 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for FLJ33581 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for FLJ33581 Gene

No data available for Regulatory Elements for FLJ33581 Gene

Proteins for FLJ33581 Gene

Post-translational modifications for FLJ33581 Gene

No Post-translational modifications

No data available for DME Specific Peptides for FLJ33581 Gene

Domains for FLJ33581 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for FLJ33581 Gene

Function for FLJ33581 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for FLJ33581 Gene

Localization for FLJ33581 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for FLJ33581 Gene

Pathways for FLJ33581 Gene

SuperPathways for FLJ33581 Gene

No Data Available

Interacting Proteins for FLJ33581 Gene

Gene Ontology (GO) - Biological Process for FLJ33581 Gene

None

No data available for Pathways by source for FLJ33581 Gene

Transcripts for FLJ33581 Gene

mRNA/cDNA for FLJ33581 Gene

(1) Selected AceView cDNA sequences:
(2) Additional mRNA sequences :
(2) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for FLJ33581 Gene

Uncharacterized LOC400839:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for FLJ33581 Gene

No ASD Table

Relevant External Links for FLJ33581 Gene

GeneLoc Exon Structure for
FLJ33581

Expression for FLJ33581 Gene

mRNA expression in normal human tissues for FLJ33581 Gene

mRNA differential expression in normal tissues according to GTEx for FLJ33581 Gene

This gene is overexpressed in Brain - Frontal Cortex (BA9) (14.6), Brain - Cortex (13.6), Brain - Anterior cingulate cortex (BA24) (6.4), Brain - Amygdala (6.0), and Testis (5.7).

SOURCE GeneReport for Unigene cluster for FLJ33581 Gene Hs.651965

genes like me logo Genes that share expressions with FLJ33581: view

In Situ Assay Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , mRNA Expression by UniProt/SwissProt and Expression partners for FLJ33581 Gene

Orthologs for FLJ33581 Gene

Evolution for FLJ33581 Gene

ENSEMBL:
Gene Tree for FLJ33581 (if available)
TreeFam:
Gene Tree for FLJ33581 (if available)

No data available for Orthologs for FLJ33581 Gene

Paralogs for FLJ33581 Gene

No data available for Paralogs for FLJ33581 Gene

Variants for FLJ33581 Gene

Sequence variations from dbSNP and Humsavar for FLJ33581 Gene

SNP ID Clin Chr 20 pos Sequence Context AA Info Type MAF
rs85687 -- 24,206,065(+) AGTTG(C/T)TCAGC intron-variant
rs85689 -- 24,205,928(-) CTGCC(C/T)TAAGC intron-variant
rs127801 -- 24,198,972(-) TGCAC(A/G)TACTG upstream-variant-2KB
rs224151 -- 24,197,890(+) CACAA(C/T)GAGCA upstream-variant-2KB
rs224153 -- 24,205,477(+) TCCAG(C/G)GACCT intron-variant

Structural Variations from Database of Genomic Variants (DGV) for FLJ33581 Gene

Variant ID Type Subtype PubMed ID
nsv522873 CNV Gain 19592680
nsv9793 CNV Gain+Loss 18304495
nsv833945 CNV Loss 17160897
esv2598710 CNV Deletion 19546169
esv8025 CNV Loss 19470904

Relevant External Links for FLJ33581 Gene

HapMap Linkage Disequilibrium report
FLJ33581

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for FLJ33581 Gene

Disorders for FLJ33581 Gene

No disorders were found for FLJ33581 Gene.

No data available for MalaCards , OMIM , UniProtKB/Swiss-Prot , University of Copenhagen DISEASES , Novoseek inferred disease relationships , Genatlas and External Links for FLJ33581 Gene

Publications for FLJ33581 Gene

  1. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 3

Products for FLJ33581 Gene

Sources for FLJ33581 Gene

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