Free for academic non-profit institutions. Other users need a Commercial license

Aliases for FLJ33581 Gene

Subcategory (RNA class) for FLJ33581 Gene

ncRNA

Quality Score for this RNA gene is

2

Aliases for FLJ33581 Gene

  • Uncharacterized LOC400839 3 5

External Ids for FLJ33581 Gene

Previous GeneCards Identifiers for FLJ33581 Gene

  • GC20P024130
  • GC20U900250
  • GC20P024181

Summaries for FLJ33581 Gene

GeneCards Summary for FLJ33581 Gene

FLJ33581 (Uncharacterized LOC400839) is an RNA Gene, and is affiliated with the ncRNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for FLJ33581 Gene

Genomics for FLJ33581 Gene

Regulatory Elements for FLJ33581 Gene

Enhancers for FLJ33581 Gene
GeneHancer Identifier Score Enhancer Sources TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Other Gene Targets for Enhancer

Enhancers around FLJ33581 on UCSC Golden Path with GeneCards custom track

Genomic Location for FLJ33581 Gene

Chromosome:
20
Start:
24,199,767 bp from pter
End:
24,224,588 bp from pter
Size:
24,822 bases
Orientation:
Plus strand

Genomic View for FLJ33581 Gene

Genes around FLJ33581 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
FLJ33581 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for FLJ33581 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for FLJ33581 Gene

Proteins for FLJ33581 Gene

Post-translational modifications for FLJ33581 Gene

No Post-translational modifications

No data available for DME Specific Peptides for FLJ33581 Gene

Domains & Families for FLJ33581 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for FLJ33581 Gene

Function for FLJ33581 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for FLJ33581 Gene

Localization for FLJ33581 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for FLJ33581 Gene

Pathways & Interactions for FLJ33581 Gene

SuperPathways for FLJ33581 Gene

No Data Available

Interacting Proteins for FLJ33581 Gene

Gene Ontology (GO) - Biological Process for FLJ33581 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for FLJ33581 Gene

Drugs & Compounds for FLJ33581 Gene

No Compound Related Data Available

Transcripts for FLJ33581 Gene

mRNA/cDNA for FLJ33581 Gene

(2) Additional mRNA sequences :
(1) Selected AceView cDNA sequences:
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for FLJ33581 Gene

Uncharacterized LOC400839:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for FLJ33581 Gene

No ASD Table

Relevant External Links for FLJ33581 Gene

GeneLoc Exon Structure for
FLJ33581

Expression for FLJ33581 Gene

mRNA expression in normal human tissues for FLJ33581 Gene

mRNA differential expression in normal tissues according to GTEx for FLJ33581 Gene

This gene is overexpressed in Brain - Frontal Cortex (BA9) (x14.6), Brain - Cortex (x13.6), Brain - Anterior cingulate cortex (BA24) (x6.4), Brain - Amygdala (x6.0), and Testis (x5.7).

SOURCE GeneReport for Unigene cluster for FLJ33581 Gene Hs.651965

genes like me logo Genes that share expression patterns with FLJ33581: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , mRNA Expression by UniProt/SwissProt and Protein tissue co-expression partners for FLJ33581 Gene

Orthologs for FLJ33581 Gene

Evolution for FLJ33581 Gene

ENSEMBL:
Gene Tree for FLJ33581 (if available)
TreeFam:
Gene Tree for FLJ33581 (if available)

No data available for Orthologs for FLJ33581 Gene

Paralogs for FLJ33581 Gene

No data available for Paralogs for FLJ33581 Gene

Variants for FLJ33581 Gene

Sequence variations from dbSNP and Humsavar for FLJ33581 Gene

SNP ID Clin Chr 20 pos Sequence Context AA Info Type
rs85687 -- 24,206,065(+) AGTTG(C/T)TCAGC intron-variant
rs85689 -- 24,205,928(-) CTGCC(C/T)TAAGC intron-variant
rs127801 -- 24,198,972(-) TGCAC(A/G)TACTG upstream-variant-2KB
rs472526 -- 24,215,983(-) cccgg(A/C)cactc intron-variant
rs473253 -- 24,215,942(-) tctta(A/G)catat intron-variant

Structural Variations from Database of Genomic Variants (DGV) for FLJ33581 Gene

Variant ID Type Subtype PubMed ID
nsv522873 CNV Gain 19592680
nsv9793 CNV Gain+Loss 18304495
nsv833945 CNV Loss 17160897
esv2598710 CNV Deletion 19546169
esv8025 CNV Loss 19470904

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Variation tolerance and Relevant External Links for FLJ33581 Gene

Disorders for FLJ33581 Gene

No disorders were found for FLJ33581 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for FLJ33581 Gene

Publications for FLJ33581 Gene

  1. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 3 67

Products for FLJ33581 Gene

Sources for FLJ33581 Gene

Content