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Aliases for FLJ33534 Gene

Subcategory (RNA class) for FLJ33534 Gene

lncRNA

Quality Score for this RNA gene is

2

Aliases for FLJ33534 Gene

  • Uncharacterized LOC285150 3

External Ids for FLJ33534 Gene

ORGUL Members for FLJ33534 Gene

Summaries for FLJ33534 Gene

GeneCards Summary for FLJ33534 Gene

FLJ33534 (Uncharacterized LOC285150) is a RNA Gene, and belongs to lncRNA RNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for FLJ33534 Gene

Genomics for FLJ33534 Gene

Genomic Location for FLJ33534 Gene

Start:
11,099,851 bp from pter
End:
11,132,821 bp from pter
Size:
32,971 bases
Orientation:
Minus strand

Genomic View for FLJ33534 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for FLJ33534 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for FLJ33534 Gene

No data available for Regulatory Elements for FLJ33534 Gene

Proteins for FLJ33534 Gene

Post-translational modifications for FLJ33534 Gene

No Post-translational modifications

No data available for DME Specific Peptides for FLJ33534 Gene

Domains for FLJ33534 Gene

No data available for Gene Families , Protein Domains and UniProtKB/Swiss-Prot for FLJ33534 Gene

Function for FLJ33534 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for FLJ33534 Gene

Localization for FLJ33534 Gene

No data available for Gene Ontology (GO) - Cellular Components for FLJ33534 Gene

Pathways for FLJ33534 Gene

SuperPathways for FLJ33534 Gene

No Data Available

Interacting Proteins for FLJ33534 Gene

Gene Ontology (GO) - Biological Process for FLJ33534 Gene

None

No data available for Pathways by source for FLJ33534 Gene

Transcripts for FLJ33534 Gene

mRNA/cDNA for FLJ33534 Gene

(1) REFSEQ mRNAs :
(2) Additional mRNA sequences :
(5) Selected AceView cDNA sequences:
(6) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for FLJ33534 Gene

Uncharacterized LOC285150:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for FLJ33534 Gene

ExUns: 1a · 1b · 1c · 1d ^ 2 ^ 3a · 3b · 3c ^ 4a · 4b ^ 5a · 5b ^ 6a · 6b ^ 7 ^ 8
SP1: - - - - - - -
SP2: - - -
SP3: - - - - - -
SP4: -
SP5:

Relevant External Links for FLJ33534 Gene

GeneLoc Exon Structure for
FLJ33534

Expression for FLJ33534 Gene

SOURCE GeneReport for Unigene cluster for FLJ33534 Gene Hs.329841

No Expression Related Data Available

Orthologs for FLJ33534 Gene

Evolution for FLJ33534 Gene

ENSEMBL:
Gene Tree for FLJ33534 (if available)
TreeFam:
Gene Tree for FLJ33534 (if available)

No data available for Orthologs for FLJ33534 Gene

Paralogs for FLJ33534 Gene

No data available for Paralogs for FLJ33534 Gene

Variants for FLJ33534 Gene

Sequence variations from dbSNP and Humsavar for FLJ33534 Gene

SNP ID Clin Chr 02 pos Sequence Context AA Info Type MAF
rs866994 -- 11,103,233(-) CTGCG(C/G)CCTCC intron-variant
rs866995 -- 11,103,261(-) CTAGC(C/T)CCCAG intron-variant
rs866996 -- 11,103,146(-) GTGAA(C/G)AGCAC intron-variant
rs866997 -- 11,103,248(-) CCAAC(A/C)AACGG intron-variant
rs868393 -- 11,130,564(+) ttttc(A/G)gacat intron-variant

Structural Variations from Database of Genomic Variants (DGV) for FLJ33534 Gene

Variant ID Type Subtype PubMed ID
esv2658920 CNV Deletion 23128226
esv2672835 CNV Deletion 23128226
esv2719665 CNV Deletion 23290073
esv1118036 CNV Insertion 17803354
esv2719666 CNV Deletion 23290073
esv3945 CNV Deletion 18987735
dgv629e201 CNV Deletion 23290073
esv2719668 CNV Deletion 23290073
esv2719670 CNV Deletion 23290073
nsv520789 CNV Loss 19592680

Relevant External Links for FLJ33534 Gene

HapMap Linkage Disequilibrium report
FLJ33534

Disorders for FLJ33534 Gene

No disorders were found for FLJ33534 Gene.

No data available for UniProtKB/Swiss-Prot for FLJ33534 Gene

Publications for FLJ33534 Gene

  1. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 3
  2. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 3
  3. Novel genetic loci identified for the pathophysiology of childhood obesity in the Hispanic population. (PMID: 23251661) Comuzzie A.G. … Butte N.F. (PLoS ONE 2012) 3
  4. Genome-wide association study of monoamine metabolite levels in human cerebrospinal fluid. (PMID: 23319000) Luykx J.J. … Ophoff R.A. (Mol. Psychiatry 2013) 3

Products for FLJ33534 Gene

Sources for FLJ33534 Gene

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