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Aliases for FLJ33360 Gene

Subcategory (RNA class) for FLJ33360 Gene

lncRNA

Quality Score for this RNA gene is

2

Aliases for FLJ33360 Gene

  • FLJ33360 Protein 3
  • CTD-2324F15.2 3

External Ids for FLJ33360 Gene

Previous GeneCards Identifiers for FLJ33360 Gene

  • GC05M006363

Summaries for FLJ33360 Gene

GeneCards Summary for FLJ33360 Gene

FLJ33360 (FLJ33360 Protein) is an RNA Gene, and is affiliated with the lncRNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for FLJ33360 Gene

Genomics for FLJ33360 Gene

Regulatory Elements for FLJ33360 Gene

Genomic Location for FLJ33360 Gene

Start:
6,310,441 bp from pter
End:
6,339,884 bp from pter
Size:
29,444 bases
Orientation:
Minus strand

Genomic View for FLJ33360 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for FLJ33360 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for FLJ33360 Gene

Proteins for FLJ33360 Gene

  • Protein details for FLJ33360 Gene (UniProtKB/TrEMBL)

    Protein Symbol:
    Q8NBE2
    Recommended name:
    FLJ33360 protein
    Protein Accession:
    Q8NBE2
    Secondary Accessions:

    Protein attributes for FLJ33360 Gene

    Size:
    130 amino acids
    Molecular mass:
    14395 Da
    Quaternary structure:
    No Data Available

neXtProt entry for FLJ33360 Gene

Proteomics data for FLJ33360 Gene at MOPED

Post-translational modifications for FLJ33360 Gene

No Post-translational modifications

No data available for DME Specific Peptides for FLJ33360 Gene

Domains for FLJ33360 Gene

Protein Domains for FLJ33360 Gene

ProtoNet:

Suggested Antigen Peptide Sequences for FLJ33360 Gene

GenScript: Design optimal peptide antigens:

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with FLJ33360: view

No data available for Gene Families and UniProtKB/Swiss-Prot for FLJ33360 Gene

Function for FLJ33360 Gene

Phenotypes for FLJ33360 Gene

GenomeRNAi human phenotypes for FLJ33360:
genes like me logo Genes that share phenotypes with FLJ33360: view

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for FLJ33360 Gene

Localization for FLJ33360 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for FLJ33360 Gene

Pathways for FLJ33360 Gene

SuperPathways for FLJ33360 Gene

No Data Available

Interacting Proteins for FLJ33360 Gene

Gene Ontology (GO) - Biological Process for FLJ33360 Gene

None

No data available for Pathways by source for FLJ33360 Gene

Transcripts for FLJ33360 Gene

mRNA/cDNA for FLJ33360 Gene

(1) REFSEQ mRNAs :
(4) Additional mRNA sequences :
(3) Selected AceView cDNA sequences:
(3) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for FLJ33360 Gene

FLJ33360 protein:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for FLJ33360 Gene

No ASD Table

Relevant External Links for FLJ33360 Gene

GeneLoc Exon Structure for
FLJ33360

Expression for FLJ33360 Gene

mRNA expression in normal human tissues for FLJ33360 Gene

SOURCE GeneReport for Unigene cluster for FLJ33360 Gene Hs.376760

genes like me logo Genes that share expressions with FLJ33360: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein expression and mRNA Expression by UniProt/SwissProt for FLJ33360 Gene

Orthologs for FLJ33360 Gene

Evolution for FLJ33360 Gene

ENSEMBL:
Gene Tree for FLJ33360 (if available)
TreeFam:
Gene Tree for FLJ33360 (if available)

No data available for Orthologs for FLJ33360 Gene

Paralogs for FLJ33360 Gene

No data available for Paralogs for FLJ33360 Gene

Variants for FLJ33360 Gene

Sequence variations from dbSNP and Humsavar for FLJ33360 Gene

SNP ID Clin Chr 05 pos Sequence Context AA Info Type MAF
rs271404 -- 6,334,939(-) GGTGC(A/C)CGCTT intron-variant
rs388789 -- 6,322,757(+) GCACA(G/T)TCTCA intron-variant
rs395970 -- 6,322,744(+) TCTCA(C/G)AGTGG intron-variant
rs436043 -- 6,322,750(+) AGTGG(C/G)AGCAC intron-variant
rs444526 -- 6,322,719(+) GCACT(A/G/T)TCTCA intron-variant

Structural Variations from Database of Genomic Variants (DGV) for FLJ33360 Gene

Variant ID Type Subtype PubMed ID
nsv520627 CNV Loss 19592680
esv989624 CNV Insertion 20482838
nsv327875 CNV Insertion 16902084
esv1319853 CNV Insertion 17803354
nsv523894 CNV Loss 19592680
esv1026263 CNV Insertion 17803354

Relevant External Links for FLJ33360 Gene

HapMap Linkage Disequilibrium report
FLJ33360

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for FLJ33360 Gene

Disorders for FLJ33360 Gene

Relevant External Links for FLJ33360

Genetic Association Database (GAD)
FLJ33360
Human Genome Epidemiology (HuGE) Navigator
FLJ33360
genes like me logo Genes that share disorders with FLJ33360: view

No data available for UniProtKB/Swiss-Prot for FLJ33360 Gene

Publications for FLJ33360 Gene

  1. Personalized smoking cessation: interactions between nicotine dose, dependence and quit-success genotype score. (PMID: 20379614) Rose J.E. … Uhl G.R. (Mol. Med. 2010) 3 48
  2. Ischemic stroke is associated with the ABO locus: the EuroCLOT study. (PMID: 23381943) Williams F.M. … . (Ann. Neurol. 2013) 3
  3. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 3
  4. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 3

Products for FLJ33360 Gene

  • QIAGEN qRT-PCR Assays for microRNAs that regulate FLJ33360
    • QuantiTect SYBR Green Assays in human,mouse,rat
    • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
    • QuantiFast Probe-based Assays in human,mouse,rat
    • Predesigned siRNA for gene silencing in human,mouse,rat for FLJ33360
    • Block miRNA regulation of FLJ33360 using miScript Target Protectors

    Sources for FLJ33360 Gene

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