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Aliases for FLJ33360 Gene

Subcategory (RNA class) for FLJ33360 Gene

ncRNA

Quality Score for this RNA gene is

2

Aliases for FLJ33360 Gene

  • FLJ33360 Protein 3 5
  • CTD-2324F15.2 3

External Ids for FLJ33360 Gene

Previous GeneCards Identifiers for FLJ33360 Gene

  • GC05M006363

Summaries for FLJ33360 Gene

GeneCards Summary for FLJ33360 Gene

FLJ33360 (FLJ33360 Protein) is an RNA Gene, and is affiliated with the ncRNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for FLJ33360 Gene

Genomics for FLJ33360 Gene

Regulatory Elements for FLJ33360 Gene

Enhancers for FLJ33360 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH05F005418 1.8 FANTOM5 Ensembl ENCODE 26.8 +918.5 918531 5.6 HDGF PKNOX1 ARNT CREB3L1 WRNIP1 ARID4B SIN3A FEZF1 DMAP1 ZNF2 FLJ33360 ICE1 ADAMTS16 CTD-2297D10.2 LOC101929200
GH05F005339 1.3 Ensembl ENCODE 34.7 +999.4 999437 1.5 SIN3A FEZF1 ZNF2 ZNF143 FOS DEK ZNF263 SP3 JUNB REST FLJ33360 ICE1 ENSG00000250481 ENSG00000251426 ENSG00000251506 ENSG00000248973 LOC105374629 ENSG00000248467 LINC02114 ENSG00000248311
GH05F006376 1.1 ENCODE 37 -38.3 -38348 2.5 HDGF CREB3L1 WRNIP1 ARID4B SIN3A DMAP1 ZNF2 YY1 DEK CEBPZ FLJ33360 ICE1 LINC02102 PAPD7 MED10 LOC105374638
GH05F006711 1.1 ENCODE 24.1 -374.1 -374060 5.1 MLX CREB3L1 WRNIP1 ZFP64 ARID4B SIN3A DMAP1 ZNF2 YY1 ZNF143 PAPD7 FLJ33360 LINC02102 SRD5A1 PIR57279
GH05F005349 1.6 FANTOM5 Ensembl ENCODE 12.5 +988.9 988880 2.6 PKNOX1 ATF1 ARID4B FEZF1 ZNF48 GLIS2 ELK1 FOS DEK ZNF263 ICE1 FLJ33360 ALG3P1 ENSG00000250866
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around FLJ33360 on UCSC Golden Path with GeneCards custom track

Genomic Location for FLJ33360 Gene

Chromosome:
5
Start:
6,310,441 bp from pter
End:
6,339,884 bp from pter
Size:
29,444 bases
Orientation:
Minus strand

Genomic View for FLJ33360 Gene

Genes around FLJ33360 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
FLJ33360 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for FLJ33360 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for FLJ33360 Gene

Proteins for FLJ33360 Gene

  • Protein details for FLJ33360 Gene (UniProtKB/TrEMBL)

    Protein Symbol:
    Q8NBE2
    Recommended name:
    FLJ33360 protein
    Protein Accession:
    Q8NBE2

    Protein attributes for FLJ33360 Gene

    Size:
    130 amino acids
    Molecular mass:
    14395 Da
    Quaternary structure:
    No Data Available

neXtProt entry for FLJ33360 Gene

Post-translational modifications for FLJ33360 Gene

No Post-translational modifications

No data available for DME Specific Peptides for FLJ33360 Gene

Domains & Families for FLJ33360 Gene

Protein Domains for FLJ33360 Gene

ProtoNet:

Suggested Antigen Peptide Sequences for FLJ33360 Gene

GenScript: Design optimal peptide antigens:

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with FLJ33360: view

No data available for Gene Families and UniProtKB/Swiss-Prot for FLJ33360 Gene

Function for FLJ33360 Gene

Phenotypes for FLJ33360 Gene

GenomeRNAi human phenotypes for FLJ33360:
genes like me logo Genes that share phenotypes with FLJ33360: view

Animal Model Products

Inhibitory RNA Products

Clone Products

Flow Cytometry Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for FLJ33360 Gene

Localization for FLJ33360 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for FLJ33360 Gene

Pathways & Interactions for FLJ33360 Gene

SuperPathways for FLJ33360 Gene

No Data Available

Interacting Proteins for FLJ33360 Gene

Gene Ontology (GO) - Biological Process for FLJ33360 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for FLJ33360 Gene

Transcripts for FLJ33360 Gene

mRNA/cDNA for FLJ33360 Gene

(1) REFSEQ mRNAs :
(4) Additional mRNA sequences :
(3) Selected AceView cDNA sequences:
(2) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for FLJ33360 Gene

FLJ33360 protein:
Representative Sequences:

Inhibitory RNA Products

Clone Products

Flow Cytometry Products

Alternative Splicing Database (ASD) splice patterns (SP) for FLJ33360 Gene

No ASD Table

Relevant External Links for FLJ33360 Gene

GeneLoc Exon Structure for
FLJ33360

Expression for FLJ33360 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for FLJ33360 Gene

SOURCE GeneReport for Unigene cluster for FLJ33360 Gene:

Hs.376760
genes like me logo Genes that share expression patterns with FLJ33360: view

Primer Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for FLJ33360 Gene

Orthologs for FLJ33360 Gene

Evolution for FLJ33360 Gene

ENSEMBL:
Gene Tree for FLJ33360 (if available)
TreeFam:
Gene Tree for FLJ33360 (if available)

No data available for Orthologs for FLJ33360 Gene

Paralogs for FLJ33360 Gene

No data available for Paralogs for FLJ33360 Gene

Variants for FLJ33360 Gene

Sequence variations from dbSNP and Humsavar for FLJ33360 Gene

SNP ID Clin Chr 05 pos Sequence Context AA Info Type
rs10050365 -- 6,310,882(+) tatgt(C/T)tggtg nc-transcript-variant
rs10050369 -- 6,310,907(+) ggaaa(C/T)gtggg nc-transcript-variant
rs10051986 -- 6,321,937(+) GCTAG(C/T)TTTCT intron-variant
rs10052494 -- 6,317,359(+) CTGGG(C/T)GGGCA intron-variant
rs10056730 -- 6,313,998(+) ATCCT(C/T)TGATG intron-variant

Structural Variations from Database of Genomic Variants (DGV) for FLJ33360 Gene

Variant ID Type Subtype PubMed ID
nsv596945 CNV gain 21841781
nsv523894 CNV loss 19592680
nsv520627 CNV loss 19592680
nsv327875 CNV insertion 16902084
nsv1148817 CNV insertion 26484159
nsv1142430 CNV tandem duplication 24896259
nsv1142429 CNV tandem duplication 24896259
nsv1119525 CNV insertion 24896259
esv989624 CNV insertion 20482838
esv1319853 CNV insertion 17803354
esv1026263 CNV insertion 17803354

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Variation tolerance and Relevant External Links for FLJ33360 Gene

Disorders for FLJ33360 Gene

Relevant External Links for FLJ33360

Genetic Association Database (GAD)
FLJ33360
Human Genome Epidemiology (HuGE) Navigator
FLJ33360
Atlas of Genetics and Cytogenetics in Oncology and Haematology:
FLJ33360

No disorders were found for FLJ33360 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for FLJ33360 Gene

Publications for FLJ33360 Gene

  1. Personalized smoking cessation: interactions between nicotine dose, dependence and quit-success genotype score. (PMID: 20379614) Rose J.E. … Uhl G.R. (Mol. Med. 2010) 3 46 64
  2. Ischemic stroke is associated with the ABO locus: the EuroCLOT study. (PMID: 23381943) Williams F.M. … . (Ann. Neurol. 2013) 3 64
  3. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 3 64
  4. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 3 64

Products for FLJ33360 Gene

Sources for FLJ33360 Gene

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